BLASTX nr result

ID: Jatropha_contig00016544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00016544
         (779 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ21939.1| hypothetical protein PRUPE_ppa023598mg [Prunus pe...   101   2e-19
gb|EMJ01397.1| hypothetical protein PRUPE_ppa016013mg, partial [...   100   5e-19
gb|EMJ00478.1| hypothetical protein PRUPE_ppa022873mg [Prunus pe...   100   5e-19
gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus pe...    97   8e-18
gb|EMJ21583.1| hypothetical protein PRUPE_ppa021778mg [Prunus pe...    94   4e-17
gb|EMJ08431.1| hypothetical protein PRUPE_ppa026856mg [Prunus pe...    93   1e-16
gb|EMJ07836.1| hypothetical protein PRUPE_ppa021001mg [Prunus pe...    90   9e-16
gb|EMJ17360.1| hypothetical protein PRUPE_ppa015308mg, partial [...    87   5e-15
gb|EMJ13768.1| hypothetical protein PRUPE_ppa015570mg, partial [...    86   1e-14
emb|CAN79625.1| hypothetical protein VITISV_035899 [Vitis vinifera]    86   1e-14
gb|EMJ28035.1| hypothetical protein PRUPE_ppa017565mg, partial [...    80   7e-13
gb|EMJ22610.1| hypothetical protein PRUPE_ppb015376mg [Prunus pe...    80   7e-13
gb|EMJ04125.1| hypothetical protein PRUPE_ppa016266mg, partial [...    78   4e-12
ref|XP_004295592.1| PREDICTED: uncharacterized protein LOC101291...    77   8e-12
gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprot...    76   1e-11
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati...    75   3e-11
dbj|BAF01788.1| putative Ty3-gypsy-like retroelement pol polypro...    75   3e-11
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-...    75   3e-11
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]         74   4e-11
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...    74   7e-11

>gb|EMJ21939.1| hypothetical protein PRUPE_ppa023598mg [Prunus persica]
          Length = 1457

 Score =  101 bits (252), Expect = 2e-19
 Identities = 68/160 (42%), Positives = 89/160 (55%), Gaps = 8/160 (5%)
 Frame = +1

Query: 10   LLSLLAGVEKSIIANNLATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWVMM 189
            L+ L  G + S+ A NLA E V V   V+Q +   N KYKAAAD HR  K F  GD VM+
Sbjct: 1291 LVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLEQTNAKYKAAADRHRRVKVFQEGDSVMI 1350

Query: 190  YLRXXXXXXXXXXXXXXIE--PFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYPD- 360
            +LR               +  P++VLK+I DNAYV++LP  M I   FNVADL+ F  D 
Sbjct: 1351 FLRKERFPVGTYSKLKPKKYGPYKVLKRINDNAYVIELPDSMGIFNIFNVADLYEFREDE 1410

Query: 361  ----DDHSRSSSFKVEGSDAEQLGSLQTKE-ERARPCHIQ 465
                D +S SSS +VEG+D EQ+      E E+ R  ++Q
Sbjct: 1411 VIYPDHNSGSSSSEVEGTDVEQMADFIAVELEKGRSGNLQ 1450


>gb|EMJ01397.1| hypothetical protein PRUPE_ppa016013mg, partial [Prunus persica]
          Length = 1057

 Score =  100 bits (249), Expect = 5e-19
 Identities = 64/143 (44%), Positives = 83/143 (58%), Gaps = 7/143 (4%)
 Frame = +1

Query: 10   LLSLLAGVEKSIIANNLATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWVMM 189
            L+ L  G + S+ A NLA E V V   V+Q +   N KYKAAAD HR  K F  GD VM+
Sbjct: 899  LVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLEQTNAKYKAAADRHRRVKVFQEGDSVMI 958

Query: 190  YLRXXXXXXXXXXXXXXIE--PFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYPDD 363
            +LR               +  P++VLK+I DNAYV++LP  M IS  FNVADL+ F  D+
Sbjct: 959  FLRKERFPVGTYSKLKPKKYGPYKVLKRINDNAYVIELPDSMGISNIFNVADLYEFLEDE 1018

Query: 364  -----DHSRSSSFKVEGSDAEQL 417
                  +S SSS +VEG+D EQ+
Sbjct: 1019 VLYPYYNSGSSSSEVEGTDVEQM 1041


>gb|EMJ00478.1| hypothetical protein PRUPE_ppa022873mg [Prunus persica]
          Length = 777

 Score =  100 bits (249), Expect = 5e-19
 Identities = 56/119 (47%), Positives = 75/119 (63%), Gaps = 7/119 (5%)
 Frame = +1

Query: 91  VQQFITAAN*KYKAAADEHRHYKSFTVGDWVMMYLRXXXXXXXXXXXXXXIE--PFQVLK 264
           V++ +   N KYKAA D+HR  K F  GD++M+YL+               +  P ++LK
Sbjct: 621 VKERLEKTNAKYKAATDKHRRVKVFNEGDFIMVYLKNERFPMGTYRKLQPHKYGPSKILK 680

Query: 265 KIIDNAYVLDLPKDMKISKTFNVADLFPFYPDD-----DHSRSSSFKVEGSDAEQLGSL 426
           KI DNAYV+DLP  M+IS +FNVADL+ F+ DD     D+SRSSS KVEG+DAE +  L
Sbjct: 681 KINDNAYVVDLPHSMEISSSFNVADLYAFHEDDLLYLEDNSRSSSSKVEGTDAEHMAEL 739


>gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
          Length = 1485

 Score = 96.7 bits (239), Expect = 8e-18
 Identities = 65/160 (40%), Positives = 86/160 (53%), Gaps = 3/160 (1%)
 Frame = +1

Query: 10   LLSLLAGVEKSIIANNLATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWVMM 189
            L+ L  G + S+ A NLA E V V   V+Q +   N KYKAAAD+HR  K F  GD VM+
Sbjct: 1333 LVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLEQTNAKYKAAADKHRRVKVFQEGDSVMI 1392

Query: 190  YLRXXXXXXXXXXXXXXIE--PFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYPDD 363
            +LR               +  P++VLK+I DNAYV++LP  M IS  FNVADL+ F  D+
Sbjct: 1393 FLRKERFPVGTYSKLKPKKYGPYKVLKRINDNAYVIELPDSMGISNIFNVADLYEFREDE 1452

Query: 364  DHSRSSSFKVEGSDAEQLGSLQTKE-ERARPCHIQHAHAS 480
                     VEG+D EQ+      E E+ R  ++Q    S
Sbjct: 1453 ---------VEGTDVEQMADFIAVELEKGRSGNMQFCRPS 1483


>gb|EMJ21583.1| hypothetical protein PRUPE_ppa021778mg [Prunus persica]
          Length = 1384

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 63/155 (40%), Positives = 84/155 (54%), Gaps = 3/155 (1%)
 Frame = +1

Query: 10   LLSLLAGVEKSIIANNLATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWVMM 189
            L+ L  G + S+ A NLA E V V   V+Q +   N KYKAAAD HR  K F  GD VM+
Sbjct: 1232 LVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLEQTNAKYKAAADRHRRVKVFQEGDSVMI 1291

Query: 190  YLRXXXXXXXXXXXXXXIE--PFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYPDD 363
            +LR               +  P++VLK+I DNAYV++LP  M IS  FNVADL+ F  D+
Sbjct: 1292 FLRKERFPAGTYSKLKPKKYGPYKVLKRINDNAYVIELPDSMGISNIFNVADLYEFREDE 1351

Query: 364  DHSRSSSFKVEGSDAEQLGSLQTKE-ERARPCHIQ 465
                     VEG+D +Q+      E E+ R  ++Q
Sbjct: 1352 ---------VEGTDVDQMADFIAVELEKGRSGNMQ 1377


>gb|EMJ08431.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
          Length = 1493

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 64/160 (40%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
 Frame = +1

Query: 10   LLSLLAGVEKSIIANNLATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWVMM 189
            L+ L  G + S+ A NLA E V V   V+Q +   N KYKAAAD HR  K F  GD VM+
Sbjct: 1341 LVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLEQTNAKYKAAADRHRRVKVFQEGDSVMV 1400

Query: 190  YLRXXXXXXXXXXXXXXIE--PFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYPDD 363
            +LR               +  P++VLK+I DNAY ++LP  M IS  FNVADL+ F  D+
Sbjct: 1401 FLRKERFPAGTYSKLKPKKYGPYKVLKRINDNAYDIELPDSMGISNIFNVADLYEFREDE 1460

Query: 364  DHSRSSSFKVEGSDAEQLGSLQTKE-ERARPCHIQHAHAS 480
                     VEG+D EQ+      E E+ R  ++Q    S
Sbjct: 1461 ---------VEGTDVEQMTDFIAVELEKGRSGNMQFCRPS 1491


>gb|EMJ07836.1| hypothetical protein PRUPE_ppa021001mg [Prunus persica]
          Length = 590

 Score = 89.7 bits (221), Expect = 9e-16
 Identities = 54/130 (41%), Positives = 75/130 (57%), Gaps = 7/130 (5%)
 Frame = +1

Query: 58  LATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWVMMYLRXXXXXXXXXXXXX 237
           L   H  V   V++ +   N K+KAAAD+HR  K F  G+ VM+Y++             
Sbjct: 431 LPKNHGAVKNEVKERLEKTNAKHKAAADKHRQVKVFNEGNSVMVYMKKERFSMGAHRKLQ 490

Query: 238 XIE--PFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYPDD-----DHSRSSSFKVE 396
             +  P+++LKKI DNAYV+DL   M+IS TFNVADL+ F  DD     D+S S+SF+VE
Sbjct: 491 PRKYGPYKILKKINDNAYVVDLSPSMEISSTFNVADLYAFNKDDMLYPEDNSGSNSFEVE 550

Query: 397 GSDAEQLGSL 426
            +D E +  L
Sbjct: 551 ATDGEYMAEL 560


>gb|EMJ17360.1| hypothetical protein PRUPE_ppa015308mg, partial [Prunus persica]
          Length = 1150

 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 53/120 (44%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
 Frame = +1

Query: 10   LLSLLAGVEKSIIANNLATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWVMM 189
            L+    G + S+ A NLA E V V   V+Q +   N KYKAAAD HR  K F  GD VM+
Sbjct: 1031 LVKFPRGQQTSVAAKNLAEEVVAVRDEVKQKLEQTNAKYKAAADRHRRVKVFQEGDSVMI 1090

Query: 190  YLRXXXXXXXXXXXXXXIE--PFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYPDD 363
            +LR               +  P++VLK+I DNAYV++LP  M IS  FNVADL+ F  D+
Sbjct: 1091 FLRKERFPVGTYSKLKPKKYGPYKVLKRINDNAYVIELPDSMGISNIFNVADLYEFREDE 1150


>gb|EMJ13768.1| hypothetical protein PRUPE_ppa015570mg, partial [Prunus persica]
          Length = 541

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
 Frame = +1

Query: 10  LLSLLAGVEKSIIANNLATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWVMM 189
           L+ L  G + S+ A NLA E V V   V+Q +   N KYKA+AD HR  K F  GD VM+
Sbjct: 422 LVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLEQTNAKYKASADRHRRVKVFREGDSVMI 481

Query: 190 YLRXXXXXXXXXXXXXXIE--PFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYPDD 363
           +LR               +  P++VLK+I DNAYV++LP  M I   FNVADL+ F  D+
Sbjct: 482 FLRKERFPVDTYSKLKPKKYGPYKVLKRINDNAYVIELPDSMGIPNIFNVADLYEFREDE 541


>emb|CAN79625.1| hypothetical protein VITISV_035899 [Vitis vinifera]
          Length = 866

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 52/126 (41%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
 Frame = +1

Query: 49   ANNLATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWVMMYLRXXXXXXXXXX 228
            A  +   H+EV K +++     N  YK  AD+H+  K F  GD VM+YLR          
Sbjct: 740  AERIQQIHLEVKKNLEK----VNLHYKIVADQHQRLKLFNEGDLVMVYLRKNHFPTCTYN 795

Query: 229  XXXXIEPFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYPDDDHS------RSSSFK 390
                I PF+VL+KI DNAY +DL  D+ IS TFNV D+F ++P D+ S      R S  +
Sbjct: 796  NAYKIGPFRVLQKIGDNAYKIDLLADINISNTFNVVDVFEYFPSDEFSLQPQNLRMSFLQ 855

Query: 391  VEGSDA 408
            VEG DA
Sbjct: 856  VEGIDA 861


>gb|EMJ28035.1| hypothetical protein PRUPE_ppa017565mg, partial [Prunus persica]
          Length = 914

 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
 Frame = +1

Query: 10   LLSLLAGVEKSIIANNLATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWVMM 189
            L+ L  G + S+   NLA E V V   V+Q +   N KYKAAAD+HR  + F  GD+VM+
Sbjct: 803  LVKLPRGQKTSVAEGNLAKEVVAVRDEVKQKLEQTNAKYKAAADKHRRVRVFQEGDFVMV 862

Query: 190  YLRXXXXXXXXXXXXXXIE--PFQVLKKIIDNAYVLDLPKDMKISKTFNVAD 339
            +LR               +  P++VLK+I DNA+V++LP  + IS TFNVAD
Sbjct: 863  FLRMERFRAGTYSKLKPKKYGPYKVLKRINDNAHVIELPNSVGISNTFNVAD 914


>gb|EMJ22610.1| hypothetical protein PRUPE_ppb015376mg [Prunus persica]
          Length = 601

 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 5/120 (4%)
 Frame = +1

Query: 55  NLATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWVMMYLRXXXXXXXXXXXX 234
           NLA E + V   V+Q +   N KYK A D+HR  K F  GD +M++L+            
Sbjct: 494 NLAEEVMVVSDGVKQKLEQTNTKYKTATDKHRRVKVFQEGDSIMVFLQK----------- 542

Query: 235 XXIEPFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYPD-----DDHSRSSSFKVEG 399
              E F VLK+I DN YV++LP+ M IS TFNVADL+ F  D     + +S SSS +VEG
Sbjct: 543 ---ERFLVLKRINDNVYVIELPEYMGISNTFNVADLYEFREDEALYPEHNSGSSSSEVEG 599


>gb|EMJ04125.1| hypothetical protein PRUPE_ppa016266mg, partial [Prunus persica]
          Length = 572

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 55/143 (38%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
 Frame = +1

Query: 31  VEKSIIANNLATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWVMMYLRXXXX 210
           V  SI  +  AT +  V + V   +        + AD+HR  + F   D VM+YLR    
Sbjct: 428 VHSSIGKSPFATVYTWVPRHVVDLVKLPRAHKTSPADKHRLVRLFQEEDSVMVYLRRERF 487

Query: 211 XXXXXXXXXXIE--PFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYPD-----DDH 369
                      +  P++VLKKI DNAYV+DLP  M IS TFNVADL  F+ D     DD+
Sbjct: 488 PVGTYSKLKPQKYGPYKVLKKINDNAYVMDLPSSMGISSTFNVADLHEFHDDESIYPDDN 547

Query: 370 SRSSSFKVEGSDAEQLGSLQTKE 438
           S  SS +V G+D EQ+     +E
Sbjct: 548 SGFSSSEVGGTDVEQMAEAIEEE 570


>ref|XP_004295592.1| PREDICTED: uncharacterized protein LOC101291324 [Fragaria vesca
            subsp. vesca]
          Length = 2122

 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 7/112 (6%)
 Frame = +1

Query: 91   VQQFITAAN*KYKAAADEHRHYKSFTVGDWVMMYLRXXXXXXXXXXXXXXIE--PFQVLK 264
            V+  + A N K KAAAD+HR  K F  GD VM++LR               +  PF+VL+
Sbjct: 1361 VRAKLEATNAKNKAAADKHRRIKLFKEGDDVMVFLRKERFPVGTYNKLQPKKYGPFKVLR 1420

Query: 265  KIIDNAYVLDLPKDMKISKTFNVADLFPFYPDD-----DHSRSSSFKVEGSD 405
            KI DNAYV+ LP  + IS TFNVAD++ ++ D+     ++S SSS +VE +D
Sbjct: 1421 KINDNAYVVALPAFISISNTFNVADIYEYHADEALYSIENSGSSSSEVEETD 1472


>gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
           thaliana]
          Length = 280

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
 Frame = +1

Query: 49  ANNLATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWVMMYLRXXXXXXXXXX 228
           A  +A E + V + V+  + A   K K AAD+ R +K F  GD VM+ LR          
Sbjct: 151 AETMAEEILVVKEVVKAKLEATGKKNKVAADKRRRFKVFKEGDDVMVLLRKGRFAVGTYN 210

Query: 229 XXXXIE--PFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYPD-----DDHSRSSSF 387
                +  PF+VL+KI DNAYV+ LPK M IS TFNVAD+  ++ D     +++ R+SS 
Sbjct: 211 KVKPRKYGPFKVLRKINDNAYVVALPKSMNISNTFNVADIHEYHADGVLYPEENLRTSSS 270

Query: 388 KVEGSDAEQL 417
           +VE +D  ++
Sbjct: 271 EVEETDVGEI 280


>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
          Length = 1739

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
 Frame = +1

Query: 4    LKLLSLLAGVEKSIIANNLATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWV 183
            + L+ L +  + +  A   A   +++ +  ++ I   N KYK A D+ R   +F  GD V
Sbjct: 1534 IDLMPLPSSEKLNFDAKQRAELMLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDMV 1593

Query: 184  MMYLRXXXXXXXXXXXXXXIE--PFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYP 357
             ++LR                  PF+VL KI +NAY +DLP D ++S TFNVADL P+  
Sbjct: 1594 WLHLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFRVSPTFNVADLKPYLG 1653

Query: 358  DDDHSRSSSFKV-EGSDAEQLGSLQTKEERARPCHIQH 468
            ++D   S + ++ EG D E + ++ T        HIQH
Sbjct: 1654 EEDELESRTTQMQEGEDDEDINTIDTSTSP----HIQH 1687


>dbj|BAF01788.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
           thaliana]
          Length = 127

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 7/127 (5%)
 Frame = +1

Query: 58  LATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWVMMYLRXXXXXXXXXXXXX 237
           +A E + V + V+  + A   K K AAD+ R +K F  GD VM+ LR             
Sbjct: 1   MAEEILVVKEVVKAKLEATGKKNKVAADKRRRFKVFKEGDDVMVLLRKGRFAVGTYNKVK 60

Query: 238 XIE--PFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYPD-----DDHSRSSSFKVE 396
             +  PF+VL+KI DNAYV+ LPK M IS TFNVAD+  ++ D     +++ R+SS +VE
Sbjct: 61  PRKYGPFKVLRKINDNAYVVALPKSMNISNTFNVADIHEYHADGVLYPEENLRTSSSEVE 120

Query: 397 GSDAEQL 417
            +D  ++
Sbjct: 121 ETDVGEI 127


>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|108864301|gb|ABA93040.2|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1748

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
 Frame = +1

Query: 4    LKLLSLLAGVEKSIIANNLATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWV 183
            + L+ L +  + +  A   A   +++ +  ++ I   N KYK A D+ R   +F  GD V
Sbjct: 1543 IDLMPLPSSEKLNFDAKQRAELMLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDMV 1602

Query: 184  MMYLRXXXXXXXXXXXXXXIE--PFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYP 357
             ++LR                  PF+VL KI +NAY +DLP D ++S TFNVADL P+  
Sbjct: 1603 WLHLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFRVSPTFNVADLKPYLG 1662

Query: 358  DDDHSRSSSFKV-EGSDAEQLGSLQTKEERARPCHIQH 468
            ++D   S + ++ EG D E + ++ T        HIQH
Sbjct: 1663 EEDELESRTTQMQEGEDDEDINTIDTSTSP----HIQH 1696


>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
          Length = 2241

 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 50/158 (31%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
 Frame = +1

Query: 4    LKLLSLLAGVEKSIIANNLATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWV 183
            + L+ L +  + +  A   A   +++ +  ++ I   N KYK A D+ R   +F  GD V
Sbjct: 1373 IDLMPLPSSEKLNFDAKQRAELMLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLV 1432

Query: 184  MMYLRXXXXXXXXXXXXXXIE--PFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYP 357
             ++LR                  PF+VL KI +NAY +DLP D ++S TFNVADL P+  
Sbjct: 1433 WLHLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFRVSSTFNVADLKPYLG 1492

Query: 358  DDDHSRSSSFKV-EGSDAEQLGSLQTKEERARPCHIQH 468
            ++D   S + ++ EG D E + ++ T        H+QH
Sbjct: 1493 EEDELESRTTQMQEGEDDEDINTIDTSTSP----HVQH 1526


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 4/147 (2%)
 Frame = +1

Query: 4    LKLLSLLAGVEKSIIANNLATEHVEVFK*VQQFITAAN*KYKAAADEHRHYKSFTVGDWV 183
            + LL L +  + +  A   +   +++ +  ++ I   N KYK A D+ R +  F  GD V
Sbjct: 1468 IDLLPLPSSEKVNFDAKERSELILKIHELTKENIERMNAKYKLARDKGRKHVVFAPGDLV 1527

Query: 184  MMYLRXXXXXXXXXXXXXXIE--PFQVLKKIIDNAYVLDLPKDMKISKTFNVADLFPFYP 357
             ++LR                  PF+VL+KI DNAY L+LP D  +S TFN+ADL P+  
Sbjct: 1528 WLHLRKDRFPNLRKSKLMPRADGPFKVLEKINDNAYKLELPADFGVSPTFNIADLKPYLG 1587

Query: 358  DDDH--SRSSSFKVEGSDAEQLGSLQT 432
            ++D   SR++SF+ EG D E + ++ T
Sbjct: 1588 EEDELPSRTTSFQ-EGEDDEDINTIVT 1613


Top