BLASTX nr result
ID: Jatropha_contig00016309
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00016309
(723 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS74396.1| hypothetical protein M569_00359, partial [Genlise... 98 3e-18
gb|AGZ19166.1| ribosomal protein S12 (chloroplast) [Camellia sin... 96 8e-18
ref|YP_008815228.1| ribosomal protein S12 (chloroplast) [Kalopan... 91 4e-16
ref|YP_008815183.1| ribosomal protein S12 (chloroplast) [Kalopan... 91 4e-16
ref|YP_008815054.1| ribosomal protein S12 (chloroplast) [Metapan... 91 4e-16
ref|YP_008815009.1| ribosomal protein S12 (chloroplast) [Metapan... 91 4e-16
ref|YP_008814967.1| ribosomal protein S12 (chloroplast) [Brassai... 91 4e-16
ref|YP_008814922.1| ribosomal protein S12 (chloroplast) [Brassai... 91 4e-16
ref|YP_008592664.1| ribosomal protein S12 (chloroplast) [Berberi... 89 2e-15
gb|AEQ36962.1| ribosomal protein S12 (chloroplast) [Datura stram... 86 9e-15
ref|YP_001381684.1| ribosomal protein S12 [Medicago truncatula] 86 9e-15
ref|YP_008816226.1| ribosomal protein S12 (chloroplast) [Glycine... 85 2e-14
ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygro... 85 2e-14
ref|YP_004842262.1| ribosomal protein S12 [Pyrus pyrifolia] gi|3... 84 4e-14
sp|A4GYN8.1|RR12B_POPTR RecName: Full=30S ribosomal protein S12-... 84 6e-14
emb|CDI73588.1| ribosomal protein S12, partial [Pyrus spinosa] 83 7e-14
gb|AGL13495.1| ribosomal protein S12 (chloroplast) [Liquidambar ... 83 7e-14
gb|ESW29688.1| hypothetical protein PHAVU_002G090400g [Phaseolus... 83 7e-14
gb|AHA84942.1| ribosomal protein S12 [Ajuga reptans] gi|55869720... 83 7e-14
ref|XP_004516896.1| PREDICTED: 30S ribosomal protein S12, chloro... 83 7e-14
>gb|EPS74396.1| hypothetical protein M569_00359, partial [Genlisea aurea]
Length = 106
Score = 97.8 bits (242), Expect = 3e-18
Identities = 44/55 (80%), Positives = 47/55 (85%)
Frame = +3
Query: 348 LLYSFVQAHDLNKSRIHPSTCSSALRTSPKSGGFSDISDWLSCVSNKLFNCWHVE 512
LL FV AHDLN+S IHPSTCSS LRTSPK GGF DIS+WLSC+SNKLFN WHVE
Sbjct: 49 LLVFFVSAHDLNESHIHPSTCSSTLRTSPKGGGFRDISNWLSCISNKLFNGWHVE 103
>gb|AGZ19166.1| ribosomal protein S12 (chloroplast) [Camellia sinensis]
Length = 60
Score = 96.3 bits (238), Expect = 8e-18
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYARLVQIVGLYKRIQKK 345
MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVY RLVQI+G K ++K
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYVRLVQIMGWDKTKERK 54
>ref|YP_008815228.1| ribosomal protein S12 (chloroplast) [Kalopanax septemlobus]
gi|458599672|gb|AGG39364.1| ribosomal protein S12
(chloroplast) [Kalopanax septemlobus]
Length = 142
Score = 90.9 bits (224), Expect = 4e-16
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYARLVQIVGLYKR 357
MPTIKQLIRNTRQPIRNVTKSPAL GCPQRRGTCTRVY RLVQI+ KR
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKR 50
>ref|YP_008815183.1| ribosomal protein S12 (chloroplast) [Kalopanax septemlobus]
gi|458599659|gb|AGG39351.1| ribosomal protein S12
(chloroplast) [Kalopanax septemlobus]
Length = 143
Score = 90.9 bits (224), Expect = 4e-16
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYARLVQIVGLYKR 357
MPTIKQLIRNTRQPIRNVTKSPAL GCPQRRGTCTRVY RLVQI+ KR
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKR 50
>ref|YP_008815054.1| ribosomal protein S12 (chloroplast) [Metapanax delavayi]
gi|458599431|gb|AGG39190.1| ribosomal protein S12
(chloroplast) [Metapanax delavayi]
Length = 161
Score = 90.9 bits (224), Expect = 4e-16
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYARLVQIVGLYKR 357
MPTIKQLIRNTRQPIRNVTKSPAL GCPQRRGTCTRVY RLVQI+ KR
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKR 50
>ref|YP_008815009.1| ribosomal protein S12 (chloroplast) [Metapanax delavayi]
gi|458599418|gb|AGG39177.1| ribosomal protein S12
(chloroplast) [Metapanax delavayi]
Length = 165
Score = 90.9 bits (224), Expect = 4e-16
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYARLVQIVGLYKR 357
MPTIKQLIRNTRQPIRNVTKSPAL GCPQRRGTCTRVY RLVQI+ KR
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKR 50
>ref|YP_008814967.1| ribosomal protein S12 (chloroplast) [Brassaiopsis hainla]
gi|558603148|ref|YP_008815141.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
gi|563940339|ref|YP_008814880.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599150|gb|AGG39016.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599252|gb|AGG39103.1| ribosomal protein S12
(chloroplast) [Brassaiopsis hainla]
gi|458599584|gb|AGG39277.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
Length = 149
Score = 90.9 bits (224), Expect = 4e-16
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYARLVQIVGLYKR 357
MPTIKQLIRNTRQPIRNVTKSPAL GCPQRRGTCTRVY RLVQI+ KR
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKR 50
>ref|YP_008814922.1| ribosomal protein S12 (chloroplast) [Brassaiopsis hainla]
gi|558603135|ref|YP_008815096.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
gi|563940326|ref|YP_008814835.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599137|gb|AGG39003.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599239|gb|AGG39090.1| ribosomal protein S12
(chloroplast) [Brassaiopsis hainla]
gi|458599571|gb|AGG39264.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
Length = 150
Score = 90.9 bits (224), Expect = 4e-16
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYARLVQIVGLYKR 357
MPTIKQLIRNTRQPIRNVTKSPAL GCPQRRGTCTRVY RLVQI+ KR
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKR 50
>ref|YP_008592664.1| ribosomal protein S12 (chloroplast) [Berberis bealei]
gi|536462705|gb|AGU37070.1| ribosomal protein S12
(chloroplast) [Berberis bealei]
Length = 46
Score = 88.6 bits (218), Expect = 2e-15
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYARLVQIV 372
MPTIKQLIRNTRQPI+NVTKSPAL GCPQRRGTCTRVY RLVQI+
Sbjct: 1 MPTIKQLIRNTRQPIKNVTKSPALRGCPQRRGTCTRVYVRLVQII 45
>gb|AEQ36962.1| ribosomal protein S12 (chloroplast) [Datura stramonium]
Length = 122
Score = 86.3 bits (212), Expect = 9e-15
Identities = 41/44 (93%), Positives = 41/44 (93%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYARLVQI 375
MPTIKQLIRNTRQPIRNVTKSPAL GCPQRRGTCTRVY RLV I
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVTI 44
>ref|YP_001381684.1| ribosomal protein S12 [Medicago truncatula]
Length = 127
Score = 86.3 bits (212), Expect = 9e-15
Identities = 41/44 (93%), Positives = 41/44 (93%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYARLVQI 375
MPTIKQLIRNTRQPIRNVTKSPAL GCPQRRGTCTRVY RLV I
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVTI 44
>ref|YP_008816226.1| ribosomal protein S12 (chloroplast) [Glycine soja]
gi|558604199|ref|YP_008816270.1| ribosomal protein S12
(chloroplast) [Glycine soja] gi|557469752|gb|AHA04005.1|
ribosomal protein S12 (chloroplast) [Glycine soja]
gi|557469791|gb|AHA04044.1| ribosomal protein S12
(chloroplast) [Glycine soja]
Length = 127
Score = 85.1 bits (209), Expect = 2e-14
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYARLVQI 375
MPT+KQLIRNTRQPIRNVTKSPAL GCPQRRGTCTRVY RLV I
Sbjct: 1 MPTMKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVTI 44
>ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygrometrica]
gi|340549431|gb|AEK53253.1| ribosomal protein S12
(chloroplast) [Boea hygrometrica]
Length = 134
Score = 85.1 bits (209), Expect = 2e-14
Identities = 40/42 (95%), Positives = 40/42 (95%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYARLV 381
MPTIKQLIRNTRQPIRNVTKSPAL GCPQRRGTCTRVY RLV
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV 42
>ref|YP_004842262.1| ribosomal protein S12 [Pyrus pyrifolia]
gi|345433584|dbj|BAK69406.1| ribosomal protein S12
[Pyrus pyrifolia]
Length = 124
Score = 84.0 bits (206), Expect = 4e-14
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYARL 384
MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVY+ +
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYSTI 41
>sp|A4GYN8.1|RR12B_POPTR RecName: Full=30S ribosomal protein S12-B, chloroplastic
gi|133712086|gb|ABO36729.1| 30S ribosomal protein S12
[Populus trichocarpa]
Length = 135
Score = 83.6 bits (205), Expect = 6e-14
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYA 390
MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVY+
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYS 39
>emb|CDI73588.1| ribosomal protein S12, partial [Pyrus spinosa]
Length = 38
Score = 83.2 bits (204), Expect = 7e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVY 393
MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVY
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVY 38
>gb|AGL13495.1| ribosomal protein S12 (chloroplast) [Liquidambar formosana]
Length = 124
Score = 83.2 bits (204), Expect = 7e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVY 393
MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVY
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVY 38
>gb|ESW29688.1| hypothetical protein PHAVU_002G090400g [Phaseolus vulgaris]
Length = 46
Score = 83.2 bits (204), Expect = 7e-14
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYARLVQI 375
MPT+KQLIRNTRQPIRNVTKSPAL GCPQRR TCTRVY RLVQ+
Sbjct: 1 MPTMKQLIRNTRQPIRNVTKSPALQGCPQRRETCTRVYVRLVQM 44
>gb|AHA84942.1| ribosomal protein S12 [Ajuga reptans] gi|558697205|gb|AHA84960.1|
ribosomal protein S12 [Ajuga reptans]
Length = 123
Score = 83.2 bits (204), Expect = 7e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVY 393
MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVY
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVY 38
>ref|XP_004516896.1| PREDICTED: 30S ribosomal protein S12, chloroplastic-like [Cicer
arietinum] gi|502181875|ref|XP_004516900.1| PREDICTED:
30S ribosomal protein S12, chloroplastic-like [Cicer
arietinum]
Length = 42
Score = 83.2 bits (204), Expect = 7e-14
Identities = 39/42 (92%), Positives = 39/42 (92%)
Frame = -2
Query: 506 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYARLV 381
MPTIKQLIRN RQPIRNVTKSPAL GCPQRRGTCTRVY RLV
Sbjct: 1 MPTIKQLIRNARQPIRNVTKSPALRGCPQRRGTCTRVYVRLV 42