BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00016024
         (741 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524799.1| rrp4, putative [Ricinus communis] gi|2235359...   224   e-110
ref|XP_002303939.1| predicted protein [Populus trichocarpa] gi|2...   209   e-102
gb|ESW34379.1| hypothetical protein PHAVU_001G147600g [Phaseolus...   210   2e-96
gb|EOX92344.1| Ribosomal RNA processing 4 [Theobroma cacao]           208   2e-95
ref|XP_004495115.1| PREDICTED: exosome complex component rrp4-li...   201   4e-95
ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-li...   202   5e-95
ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-li...   202   1e-94
emb|CBI32318.3| unnamed protein product [Vitis vinifera]              202   1e-94
ref|XP_004976250.1| PREDICTED: exosome complex component rrp4-li...   193   1e-93
gb|EMJ01600.1| hypothetical protein PRUPE_ppa008572mg [Prunus pe...   201   2e-93
ref|XP_003609733.1| Exosome complex exonuclease RRP4 [Medicago t...   197   9e-93
ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-li...   195   3e-92
gb|EMT05286.1| hypothetical protein F775_04859 [Aegilops tauschii]    192   1e-91
gb|EMS47415.1| hypothetical protein TRIUR3_28456 [Triticum urartu]    192   2e-91
ref|XP_002447269.1| hypothetical protein SORBIDRAFT_06g031660 [S...   192   2e-91
ref|XP_004290688.1| PREDICTED: exosome complex component rrp4-li...   197   4e-91
ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-li...   192   1e-90
ref|XP_006358436.1| PREDICTED: exosome complex component rrp4-li...   181   6e-90
ref|NP_171835.1| ribosomal RNA processing protein 4 [Arabidopsis...   194   6e-90
ref|XP_004247486.1| PREDICTED: exosome complex component rrp4-li...   179   7e-90

>ref|XP_002524799.1| rrp4, putative [Ricinus communis] gi|223535983|gb|EEF37642.1| rrp4,
           putative [Ricinus communis]
          Length = 322

 Score =  224 bits (572), Expect(2) = e-110
 Identities = 113/129 (87%), Positives = 126/129 (97%), Gaps = 1/129 (0%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLED-SILKGHGTAERDGE 223
           IQLPLNQTQK+RLQRALQQLESLH+KV+S+ASVTVADTIPI+LED +ILKGHGTAERDGE
Sbjct: 4   IQLPLNQTQKIRLQRALQQLESLHSKVHSDASVTVADTIPISLEDGNILKGHGTAERDGE 63

Query: 224 MVATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLS 403
           +VAT CGVVERVNMLVYVRSLR+RYKPE+GDI+V RV+EVAQKRWKL+INF+QDAVLMLS
Sbjct: 64  VVATTCGVVERVNMLVYVRSLRSRYKPEVGDIIVGRVIEVAQKRWKLEINFSQDAVLMLS 123

Query: 404 SMNLPDGIQ 430
           SMNLPDGIQ
Sbjct: 124 SMNLPDGIQ 132



 Score =  202 bits (513), Expect(2) = e-110
 Identities = 96/102 (94%), Positives = 99/102 (97%)
 Frame = +3

Query: 429 RRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYLVK 608
           RRRTA+DELNMRNVFEENDV+CAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTV PYLVK
Sbjct: 133 RRRTALDELNMRNVFEENDVVCAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVSPYLVK 192

Query: 609 RQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDIVAEDQVN 734
           RQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARD + EDQVN
Sbjct: 193 RQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDSMVEDQVN 234


>ref|XP_002303939.1| predicted protein [Populus trichocarpa] gi|222841371|gb|EEE78918.1|
           exonuclease family protein [Populus trichocarpa]
          Length = 320

 Score =  209 bits (533), Expect(2) = e-102
 Identities = 102/128 (79%), Positives = 120/128 (93%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEM 226
           I++ LNQTQK+RLQRAL+QLESL+ + N  ASVTVADTIP++ ED+ILKGHGT+ERDGE+
Sbjct: 4   IEISLNQTQKIRLQRALKQLESLYLRANFNASVTVADTIPVSNEDTILKGHGTSERDGEV 63

Query: 227 VATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSS 406
           VAT+CGVVERVN LVYVR+LRARYKPEIGDI+V RV+EVAQKRWKL+INF+QDAVLMLSS
Sbjct: 64  VATLCGVVERVNKLVYVRTLRARYKPEIGDIIVGRVVEVAQKRWKLEINFSQDAVLMLSS 123

Query: 407 MNLPDGIQ 430
           MNLPDG+Q
Sbjct: 124 MNLPDGLQ 131



 Score =  190 bits (482), Expect(2) = e-102
 Identities = 86/102 (84%), Positives = 95/102 (93%)
 Frame = +3

Query: 429 RRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYLVK 608
           RRRTA+DELNMR++FEENDV+C EVRNFQNDG +QLQARSQKYGKLEKGQLLT+PPYLVK
Sbjct: 132 RRRTALDELNMRSIFEENDVVCGEVRNFQNDGGIQLQARSQKYGKLEKGQLLTIPPYLVK 191

Query: 609 RQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDIVAEDQVN 734
           RQK HFHHL QY VDLILGCNGFIWVGEHV+ARD + EDQ+N
Sbjct: 192 RQKHHFHHLEQYGVDLILGCNGFIWVGEHVEARDCIVEDQLN 233


>gb|ESW34379.1| hypothetical protein PHAVU_001G147600g [Phaseolus vulgaris]
          Length = 325

 Score =  210 bits (535), Expect(2) = 2e-96
 Identities = 100/128 (78%), Positives = 120/128 (93%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEM 226
           IQLPL+QTQKVRLQ+ L+QLESL +KVNS+ASV +AD+IP+N ED +LKGHGTA+ +GE+
Sbjct: 4   IQLPLSQTQKVRLQKTLEQLESLSSKVNSDASVIIADSIPVNHEDGVLKGHGTADLNGEV 63

Query: 227 VATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSS 406
           VAT+CGVVERVN LVYVRSLR+RYKPE+GDIV+ RV+EVAQKRW+LDINFNQDAVLMLSS
Sbjct: 64  VATVCGVVERVNKLVYVRSLRSRYKPEVGDIVIGRVVEVAQKRWRLDINFNQDAVLMLSS 123

Query: 407 MNLPDGIQ 430
           MN+PDG+Q
Sbjct: 124 MNMPDGVQ 131



 Score =  169 bits (427), Expect(2) = 2e-96
 Identities = 78/104 (75%), Positives = 94/104 (90%)
 Frame = +3

Query: 423 VFRRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYL 602
           V RRRTA+DELNMR +FEENDV+CAEVR FQ+DG L LQARS+KYGKL +GQLL+VPPYL
Sbjct: 130 VQRRRTALDELNMRCIFEENDVVCAEVRGFQHDG-LHLQARSRKYGKLNRGQLLSVPPYL 188

Query: 603 VKRQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDIVAEDQVN 734
           VKRQKQHFHHL ++ +DLI+GCNGFIWVGEH++A+D + EDQV+
Sbjct: 189 VKRQKQHFHHLEEFGIDLIIGCNGFIWVGEHIEAKDDMVEDQVS 232


>gb|EOX92344.1| Ribosomal RNA processing 4 [Theobroma cacao]
          Length = 319

 Score =  208 bits (529), Expect(2) = 2e-95
 Identities = 99/128 (77%), Positives = 119/128 (92%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEM 226
           +QLPLNQTQ++RLQRAL++L SL +K NS+ASVTVADTIP+N +D+ LKGHGT E +GE+
Sbjct: 4   LQLPLNQTQRIRLQRALEKLHSLSSKANSDASVTVADTIPVNYDDAFLKGHGTTELNGEL 63

Query: 227 VATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSS 406
           VAT+CGVVERVN LVYVR+LRARYKPE+GDIVV RV+EVAQKRW+L+INF+QDAVLMLSS
Sbjct: 64  VATVCGVVERVNKLVYVRALRARYKPEVGDIVVGRVVEVAQKRWRLEINFSQDAVLMLSS 123

Query: 407 MNLPDGIQ 430
           MN+PDGIQ
Sbjct: 124 MNMPDGIQ 131



 Score =  168 bits (425), Expect(2) = 2e-95
 Identities = 78/102 (76%), Positives = 91/102 (89%)
 Frame = +3

Query: 429 RRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYLVK 608
           RRRTA+DELNMR++FEENDV+CAEVRNF +DGS+QLQARSQKYGKLEKGQLL + PYLVK
Sbjct: 132 RRRTALDELNMRSIFEENDVVCAEVRNFHHDGSVQLQARSQKYGKLEKGQLLIIDPYLVK 191

Query: 609 RQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDIVAEDQVN 734
           + KQHFH+L Q+ +DLILG NGFIWVGEHV+ARD +  DQ N
Sbjct: 192 KSKQHFHYLEQFGIDLILGRNGFIWVGEHVEARDGMIVDQAN 233


>ref|XP_004495115.1| PREDICTED: exosome complex component rrp4-like [Cicer arietinum]
          Length = 327

 Score =  201 bits (511), Expect(2) = 4e-95
 Identities = 95/128 (74%), Positives = 119/128 (92%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEM 226
           IQL L+QTQKVRLQ+AL+QLESL +KVNS+ASVT+AD+IP+N ED +LKGHGT + +GE+
Sbjct: 4   IQLQLSQTQKVRLQKALEQLESLSSKVNSDASVTIADSIPVNHEDGVLKGHGTTDLNGEV 63

Query: 227 VATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSS 406
           VAT+CGVVERVN LVYVRSLR+RYKPE+GDIV+ RV+EVAQKRW+LDIN++Q+A LMLS+
Sbjct: 64  VATLCGVVERVNKLVYVRSLRSRYKPEVGDIVIGRVVEVAQKRWRLDINYSQNAYLMLSA 123

Query: 407 MNLPDGIQ 430
           MN+PDG+Q
Sbjct: 124 MNMPDGVQ 131



 Score =  174 bits (441), Expect(2) = 4e-95
 Identities = 85/104 (81%), Positives = 92/104 (88%)
 Frame = +3

Query: 423 VFRRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYL 602
           V RRRTA+DELNMR +FEE DVICAEVR FQ+DG L LQARSQKYGKL  GQLLTVPPYL
Sbjct: 130 VQRRRTALDELNMRCIFEEMDVICAEVRGFQHDG-LHLQARSQKYGKLSTGQLLTVPPYL 188

Query: 603 VKRQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDIVAEDQVN 734
           VKRQKQHFHHL QY +DLI+GCNGFIWVGEHV+ARD + EDQVN
Sbjct: 189 VKRQKQHFHHLEQYGIDLIIGCNGFIWVGEHVEARDDMVEDQVN 232


>ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-like [Glycine max]
          Length = 327

 Score =  202 bits (515), Expect(2) = 5e-95
 Identities = 96/128 (75%), Positives = 119/128 (92%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEM 226
           IQLPL+QTQKVRLQ+AL+QLESL  KVNS+ASV +AD+I +N ED +LKGHGTA+ +GE+
Sbjct: 4   IQLPLSQTQKVRLQKALEQLESLSTKVNSDASVIIADSIHVNHEDGVLKGHGTADLNGEV 63

Query: 227 VATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSS 406
           VAT+CGVVERVN LVYVR+LR+RYKPE+GDIV+ RV+EVAQKRW+L+IN+NQDAVL+LSS
Sbjct: 64  VATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVVEVAQKRWRLEINYNQDAVLLLSS 123

Query: 407 MNLPDGIQ 430
           MN+PDG+Q
Sbjct: 124 MNMPDGVQ 131



 Score =  172 bits (436), Expect(2) = 5e-95
 Identities = 82/104 (78%), Positives = 94/104 (90%)
 Frame = +3

Query: 423 VFRRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYL 602
           V RRRTAVDELNMR +FEENDV+CAEVR FQ+DG L LQARS+KYGKL +GQLLTVPPYL
Sbjct: 130 VQRRRTAVDELNMRCIFEENDVVCAEVRGFQHDG-LHLQARSRKYGKLNRGQLLTVPPYL 188

Query: 603 VKRQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDIVAEDQVN 734
           VKRQKQHFHHL ++ +DLILGCNGFIWVGEHV+A+D + EDQV+
Sbjct: 189 VKRQKQHFHHLEEFGIDLILGCNGFIWVGEHVEAKDDMIEDQVS 232


>ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-like [Vitis vinifera]
          Length = 330

 Score =  202 bits (515), Expect(2) = 1e-94
 Identities = 99/127 (77%), Positives = 113/127 (88%)
 Frame = +2

Query: 50  QLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEMV 229
           QL LNQTQK+RLQRAL+QLESL +K NS ASV VADTIP+N ED +LKGHGT + DGE+V
Sbjct: 5   QLSLNQTQKLRLQRALEQLESLSSKSNSNASVAVADTIPVNYEDGVLKGHGTLDLDGEVV 64

Query: 230 ATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSSM 409
           AT+CGVVERVN LVY+R+LRARYKPE GDI+V RV E+A KRW+LDINF+QDAVLMLSSM
Sbjct: 65  ATLCGVVERVNKLVYIRTLRARYKPETGDIIVGRVTEIAPKRWRLDINFSQDAVLMLSSM 124

Query: 410 NLPDGIQ 430
           NLPDGIQ
Sbjct: 125 NLPDGIQ 131



 Score =  171 bits (432), Expect(2) = 1e-94
 Identities = 77/102 (75%), Positives = 93/102 (91%)
 Frame = +3

Query: 429 RRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYLVK 608
           RRRTAVDELNMR++FEEND++CAEVR FQ+DGSL LQARSQKYGKLE+GQ+LT+ PYLVK
Sbjct: 132 RRRTAVDELNMRSIFEENDIVCAEVRGFQHDGSLHLQARSQKYGKLERGQVLTISPYLVK 191

Query: 609 RQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDIVAEDQVN 734
           R+KQH H+L ++ VDLILGCNGFIWVGEHV+A+ I+ EDQ +
Sbjct: 192 RRKQHLHYLEEFGVDLILGCNGFIWVGEHVEAKGILIEDQTD 233


>emb|CBI32318.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  202 bits (515), Expect(2) = 1e-94
 Identities = 99/127 (77%), Positives = 113/127 (88%)
 Frame = +2

Query: 50  QLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEMV 229
           QL LNQTQK+RLQRAL+QLESL +K NS ASV VADTIP+N ED +LKGHGT + DGE+V
Sbjct: 5   QLSLNQTQKLRLQRALEQLESLSSKSNSNASVAVADTIPVNYEDGVLKGHGTLDLDGEVV 64

Query: 230 ATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSSM 409
           AT+CGVVERVN LVY+R+LRARYKPE GDI+V RV E+A KRW+LDINF+QDAVLMLSSM
Sbjct: 65  ATLCGVVERVNKLVYIRTLRARYKPETGDIIVGRVTEIAPKRWRLDINFSQDAVLMLSSM 124

Query: 410 NLPDGIQ 430
           NLPDGIQ
Sbjct: 125 NLPDGIQ 131



 Score =  171 bits (432), Expect(2) = 1e-94
 Identities = 77/102 (75%), Positives = 93/102 (91%)
 Frame = +3

Query: 429 RRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYLVK 608
           RRRTAVDELNMR++FEEND++CAEVR FQ+DGSL LQARSQKYGKLE+GQ+LT+ PYLVK
Sbjct: 132 RRRTAVDELNMRSIFEENDIVCAEVRGFQHDGSLHLQARSQKYGKLERGQVLTISPYLVK 191

Query: 609 RQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDIVAEDQVN 734
           R+KQH H+L ++ VDLILGCNGFIWVGEHV+A+ I+ EDQ +
Sbjct: 192 RRKQHLHYLEEFGVDLILGCNGFIWVGEHVEAKGILIEDQTD 233


>ref|XP_004976250.1| PREDICTED: exosome complex component rrp4-like [Setaria italica]
          Length = 319

 Score =  193 bits (491), Expect(2) = 1e-93
 Identities = 93/128 (72%), Positives = 114/128 (89%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEM 226
           + L LNQTQ+VRL+ AL +L+SL     S A+VTVADTIP+N ED+ILKGHGT+++DGE+
Sbjct: 4   LHLSLNQTQRVRLEAALHELQSLTPAAASAAAVTVADTIPVNQEDNILKGHGTSDQDGEV 63

Query: 227 VATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSS 406
           VAT+CGVVERVN LVYVR+LRARYKPE+GDI+V RV+E+A KRW+L+INF+QDAVLMLSS
Sbjct: 64  VATLCGVVERVNKLVYVRTLRARYKPEVGDIIVGRVIEIAPKRWRLEINFSQDAVLMLSS 123

Query: 407 MNLPDGIQ 430
           MNLPDGIQ
Sbjct: 124 MNLPDGIQ 131



 Score =  176 bits (447), Expect(2) = 1e-93
 Identities = 85/102 (83%), Positives = 92/102 (90%), Gaps = 2/102 (1%)
 Frame = +3

Query: 429 RRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYLVK 608
           RRRTAVDELNMR++FEENDVICAEVR FQ+DGSL LQARS+KYGKLE+GQLLTVPPYLVK
Sbjct: 132 RRRTAVDELNMRSIFEENDVICAEVRGFQHDGSLHLQARSEKYGKLERGQLLTVPPYLVK 191

Query: 609 RQKQHFHHLVQYDVDLILGCNGFIWVGEH--VDARDIVAEDQ 728
           R+KQHFHHL QYDVDLILGCNGFIWVGEH  VD +    EDQ
Sbjct: 192 RKKQHFHHLAQYDVDLILGCNGFIWVGEHVVVDEKVKATEDQ 233


>gb|EMJ01600.1| hypothetical protein PRUPE_ppa008572mg [Prunus persica]
          Length = 326

 Score =  201 bits (511), Expect(2) = 2e-93
 Identities = 96/128 (75%), Positives = 117/128 (91%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEM 226
           +QL LNQTQKVRLQRAL++LESL +K NS ASVTVAD+IP+N ED +LKGHGT+E +GE+
Sbjct: 4   LQLSLNQTQKVRLQRALEKLESLSSKANSNASVTVADSIPVNYEDGLLKGHGTSEFNGEV 63

Query: 227 VATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSS 406
           VAT+CG+VERVN LVYVR+LRARYKPE+GDI+V RV+EVA KRW+++IN++ DAVLMLSS
Sbjct: 64  VATVCGIVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRVEINYSHDAVLMLSS 123

Query: 407 MNLPDGIQ 430
           MNLPDGIQ
Sbjct: 124 MNLPDGIQ 131



 Score =  168 bits (425), Expect(2) = 2e-93
 Identities = 80/102 (78%), Positives = 89/102 (87%)
 Frame = +3

Query: 429 RRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYLVK 608
           RRRTA+DELNMR++FEENDVICAEVR FQ+DG L LQARSQKYGKL +GQLLTVPPYLVK
Sbjct: 132 RRRTALDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLGRGQLLTVPPYLVK 190

Query: 609 RQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDIVAEDQVN 734
           R+KQHFHHL  Y +DLI+GCNGFIWVGEHV   D +  DQVN
Sbjct: 191 RRKQHFHHLENYGIDLIIGCNGFIWVGEHVQVTDDMVVDQVN 232


>ref|XP_003609733.1| Exosome complex exonuclease RRP4 [Medicago truncatula]
           gi|217074186|gb|ACJ85453.1| unknown [Medicago
           truncatula] gi|355510788|gb|AES91930.1| Exosome complex
           exonuclease RRP4 [Medicago truncatula]
           gi|388516977|gb|AFK46550.1| unknown [Medicago
           truncatula]
          Length = 327

 Score =  197 bits (502), Expect(2) = 9e-93
 Identities = 92/128 (71%), Positives = 118/128 (92%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEM 226
           I L L+QTQK+RLQ+AL+ LESL +KVNS++SVT+AD+IP+N ED +LKGHGTA+ DGE+
Sbjct: 4   IHLQLSQTQKLRLQKALEHLESLSSKVNSDSSVTIADSIPVNHEDGVLKGHGTADLDGEV 63

Query: 227 VATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSS 406
           VAT+CGVVERVN LVYVR+LR+RYKPE+GDIV+ RV+EVAQKRW+LDIN++Q+A LMLS+
Sbjct: 64  VATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVIEVAQKRWRLDINYSQNAYLMLSA 123

Query: 407 MNLPDGIQ 430
           MN+PDG+Q
Sbjct: 124 MNMPDGVQ 131



 Score =  169 bits (429), Expect(2) = 9e-93
 Identities = 83/104 (79%), Positives = 90/104 (86%)
 Frame = +3

Query: 423 VFRRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYL 602
           V RRRTA+DELNMR +FEE DVICAEVR FQ+DG L LQARSQKYGKL  GQLLTV PYL
Sbjct: 130 VQRRRTALDELNMRCIFEEADVICAEVRGFQHDG-LHLQARSQKYGKLSTGQLLTVTPYL 188

Query: 603 VKRQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDIVAEDQVN 734
           VKRQKQHFHHL QY +DLI+GCNGFIWVGEHV+ RD + EDQVN
Sbjct: 189 VKRQKQHFHHLEQYGIDLIIGCNGFIWVGEHVEVRDDMVEDQVN 232


>ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-like [Brachypodium
           distachyon]
          Length = 319

 Score =  195 bits (496), Expect(2) = 3e-92
 Identities = 94/128 (73%), Positives = 113/128 (88%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEM 226
           + LPLNQTQ+VRL+ AL +L+SL     S ASVTVAD IP+N ED+ILKGHGT++ DGE+
Sbjct: 4   LHLPLNQTQRVRLEAALHELQSLAPAAASAASVTVADNIPVNQEDNILKGHGTSDHDGEV 63

Query: 227 VATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSS 406
           VAT+CGVVERVN LVYVR+LRARYKPE+GDI+V RV+E+A KRW+L+INF+QDAVLMLSS
Sbjct: 64  VATLCGVVERVNKLVYVRTLRARYKPEVGDIIVGRVIEIAPKRWRLEINFSQDAVLMLSS 123

Query: 407 MNLPDGIQ 430
           MNLPDGIQ
Sbjct: 124 MNLPDGIQ 131



 Score =  170 bits (431), Expect(2) = 3e-92
 Identities = 78/94 (82%), Positives = 88/94 (93%)
 Frame = +3

Query: 429 RRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYLVK 608
           RRRTAVDELNMR++FEENDV+CAEVR FQ+DGSL LQARSQKYGKL++GQLLTVP YLVK
Sbjct: 132 RRRTAVDELNMRSIFEENDVVCAEVRGFQHDGSLHLQARSQKYGKLQRGQLLTVPAYLVK 191

Query: 609 RQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARD 710
           R+KQHFHHL QYDVDLILGCNGF+WVG+HV  R+
Sbjct: 192 RRKQHFHHLEQYDVDLILGCNGFVWVGQHVLVRE 225


>gb|EMT05286.1| hypothetical protein F775_04859 [Aegilops tauschii]
          Length = 316

 Score =  192 bits (489), Expect(2) = 1e-91
 Identities = 92/128 (71%), Positives = 113/128 (88%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEM 226
           + LPLNQTQ+VRL+ AL +L++L     S A+VTVAD IP+N ED+ILKGHGT ++DGE+
Sbjct: 4   LHLPLNQTQRVRLEAALHELQTLAPAAASAAAVTVADNIPVNHEDNILKGHGTTDQDGEV 63

Query: 227 VATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSS 406
           VAT+CGVVERVN LVYVR+LRARYKPE+GDI+V RV+E+A KRW+L+INF+QDAVLMLSS
Sbjct: 64  VATLCGVVERVNKLVYVRTLRARYKPEVGDIIVGRVIEIAPKRWRLEINFSQDAVLMLSS 123

Query: 407 MNLPDGIQ 430
           MNLPDGIQ
Sbjct: 124 MNLPDGIQ 131



 Score =  171 bits (433), Expect(2) = 1e-91
 Identities = 80/95 (84%), Positives = 88/95 (92%)
 Frame = +3

Query: 429 RRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYLVK 608
           RRRTAVDELNMR++FEENDV+CAEVR FQ+DGSL LQARSQKYGKL++GQLLTVP YLVK
Sbjct: 132 RRRTAVDELNMRSIFEENDVVCAEVRGFQHDGSLHLQARSQKYGKLQRGQLLTVPAYLVK 191

Query: 609 RQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDI 713
           R+K HFHHL QYDVDLILGCNGFIWVGEHV  R+I
Sbjct: 192 RRKLHFHHLEQYDVDLILGCNGFIWVGEHVVVREI 226


>gb|EMS47415.1| hypothetical protein TRIUR3_28456 [Triticum urartu]
          Length = 326

 Score =  192 bits (489), Expect(2) = 2e-91
 Identities = 92/128 (71%), Positives = 113/128 (88%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEM 226
           + LPLNQTQ+VRL+ AL +L++L     S A+VTVAD IP+N ED+ILKGHGT ++DGE+
Sbjct: 4   LHLPLNQTQRVRLEAALHELQTLAPAAASAAAVTVADNIPVNHEDNILKGHGTTDQDGEV 63

Query: 227 VATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSS 406
           VAT+CGVVERVN LVYVR+LRARYKPE+GDI+V RV+E+A KRW+L+INF+QDAVLMLSS
Sbjct: 64  VATLCGVVERVNKLVYVRTLRARYKPEVGDIIVGRVIEIAPKRWRLEINFSQDAVLMLSS 123

Query: 407 MNLPDGIQ 430
           MNLPDGIQ
Sbjct: 124 MNLPDGIQ 131



 Score =  170 bits (430), Expect(2) = 2e-91
 Identities = 80/95 (84%), Positives = 87/95 (91%)
 Frame = +3

Query: 429 RRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYLVK 608
           RRRTAVDELNMR +FEENDV+CAEVR FQ+DGSL LQARSQKYGKL++GQLLTVP YLVK
Sbjct: 132 RRRTAVDELNMRAIFEENDVVCAEVRGFQHDGSLHLQARSQKYGKLQRGQLLTVPAYLVK 191

Query: 609 RQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDI 713
           R+K HFHHL QYDVDLILGCNGFIWVGEHV  R+I
Sbjct: 192 RRKLHFHHLEQYDVDLILGCNGFIWVGEHVVVREI 226


>ref|XP_002447269.1| hypothetical protein SORBIDRAFT_06g031660 [Sorghum bicolor]
           gi|241938452|gb|EES11597.1| hypothetical protein
           SORBIDRAFT_06g031660 [Sorghum bicolor]
          Length = 319

 Score =  192 bits (489), Expect(2) = 2e-91
 Identities = 93/126 (73%), Positives = 113/126 (89%)
 Frame = +2

Query: 53  LPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEMVA 232
           L LNQTQ+VRL+ AL +L+SL     S A+VTVADTIP+N ED+ILKGHGT+++DGE+VA
Sbjct: 6   LSLNQTQRVRLEAALHELQSLAPAAASAAAVTVADTIPVNQEDNILKGHGTSDQDGEVVA 65

Query: 233 TICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSSMN 412
           T+CGVVERVN LVYVR+LRARYKPE+GDI+V RV+E+A KRW+L+INF+QDAVLMLSSMN
Sbjct: 66  TLCGVVERVNKLVYVRTLRARYKPEVGDIIVGRVIEIAPKRWRLEINFSQDAVLMLSSMN 125

Query: 413 LPDGIQ 430
           LPDGIQ
Sbjct: 126 LPDGIQ 131



 Score =  170 bits (430), Expect(2) = 2e-91
 Identities = 79/90 (87%), Positives = 86/90 (95%)
 Frame = +3

Query: 429 RRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYLVK 608
           RRRTAVDELNMR++FEENDVICAEVR FQ+DGSL LQARS+KYGKLE+GQLL VPPYLVK
Sbjct: 132 RRRTAVDELNMRSIFEENDVICAEVRGFQHDGSLHLQARSEKYGKLERGQLLMVPPYLVK 191

Query: 609 RQKQHFHHLVQYDVDLILGCNGFIWVGEHV 698
           R+KQHFHHL QY+VDLILGCNGFIWVGEHV
Sbjct: 192 RKKQHFHHLEQYNVDLILGCNGFIWVGEHV 221


>ref|XP_004290688.1| PREDICTED: exosome complex component rrp4-like [Fragaria vesca
           subsp. vesca]
          Length = 328

 Score =  197 bits (502), Expect(2) = 4e-91
 Identities = 96/128 (75%), Positives = 116/128 (90%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEM 226
           +Q+ LNQTQKVRLQRAL++LESL +K NS ASV VAD+IP+N ED +LKGHGT+E +GE+
Sbjct: 4   LQVSLNQTQKVRLQRALEKLESLSSKPNSNASVIVADSIPVNHEDGLLKGHGTSEVNGEV 63

Query: 227 VATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSS 406
           VAT+CGVVERVN LVYVRSLRARYKPE+GDI+V RV+EVA KRW+++IN++ DAVLMLSS
Sbjct: 64  VATVCGVVERVNKLVYVRSLRARYKPEVGDIIVGRVIEVAPKRWRVEINYSHDAVLMLSS 123

Query: 407 MNLPDGIQ 430
           MNLPDGIQ
Sbjct: 124 MNLPDGIQ 131



 Score =  164 bits (415), Expect(2) = 4e-91
 Identities = 79/102 (77%), Positives = 89/102 (87%)
 Frame = +3

Query: 429 RRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYLVK 608
           RRRTA+DELNMR +FEENDVICAEVR FQ DG L LQARSQKYGKL +GQ+LTVPPYLVK
Sbjct: 132 RRRTALDELNMRTIFEENDVICAEVRGFQYDG-LHLQARSQKYGKLGRGQMLTVPPYLVK 190

Query: 609 RQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDIVAEDQVN 734
           R+KQHFH+L +Y +DLILGCNGFIWVGEHV+  D +  DQVN
Sbjct: 191 RRKQHFHNLDKYGIDLILGCNGFIWVGEHVEITDDMVVDQVN 232


>ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-like [Cucumis sativus]
          Length = 327

 Score =  192 bits (489), Expect(2) = 1e-90
 Identities = 94/128 (73%), Positives = 113/128 (88%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEM 226
           +QL LN TQK+RL+RA ++L+SL +K NS+ASV VADTIP+N ED +LKGHGT + +GE+
Sbjct: 4   LQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEV 63

Query: 227 VATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSS 406
           VA+ICGVVERVN L+YVR+LRARYKPE+GDIVV RV EVA KRW+LDIN+ QDAVLMLSS
Sbjct: 64  VASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYCQDAVLMLSS 123

Query: 407 MNLPDGIQ 430
           MNLPDGIQ
Sbjct: 124 MNLPDGIQ 131



 Score =  167 bits (424), Expect(2) = 1e-90
 Identities = 81/104 (77%), Positives = 92/104 (88%), Gaps = 2/104 (1%)
 Frame = +3

Query: 429 RRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYLVK 608
           RRRTAVDELNMR++FEENDVICAEVR  Q+DG L LQARSQKYGKLE+GQLLTV PYL+K
Sbjct: 132 RRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIK 190

Query: 609 RQKQHFHHLVQYDVDLILGCNGFIWVGEHVDAR--DIVAEDQVN 734
           R+KQHFHHL QY +DLILGCNGFIW+GEHVD +  D + EDQV+
Sbjct: 191 RRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVD 234


>ref|XP_006358436.1| PREDICTED: exosome complex component rrp4-like [Solanum tuberosum]
          Length = 325

 Score =  181 bits (459), Expect(2) = 6e-90
 Identities = 91/128 (71%), Positives = 110/128 (85%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEM 226
           IQL  + TQK+RL++AL QLESL +K+NS A+V VAD IP++ ED+ LKGHGT E   ++
Sbjct: 4   IQLSFSNTQKLRLEKALAQLESLSSKLNSNATVIVADKIPVD-EDAALKGHGTLEMGNDV 62

Query: 227 VATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSS 406
           VA++CGVVERVN LVYVR LRARYKPEIGDI+V RV+EVA KRW+L+INF+QDAVLMLSS
Sbjct: 63  VASVCGVVERVNKLVYVRPLRARYKPEIGDIIVGRVIEVAPKRWRLEINFSQDAVLMLSS 122

Query: 407 MNLPDGIQ 430
           MNLPDGIQ
Sbjct: 123 MNLPDGIQ 130



 Score =  177 bits (448), Expect(2) = 6e-90
 Identities = 82/102 (80%), Positives = 91/102 (89%)
 Frame = +3

Query: 429 RRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYLVK 608
           RRRTAVDELNMR++F ENDVICAEVR FQ+DGSL LQARSQKYGKLE+G+LL +PPYLVK
Sbjct: 131 RRRTAVDELNMRSIFVENDVICAEVRGFQHDGSLHLQARSQKYGKLERGKLLKIPPYLVK 190

Query: 609 RQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDIVAEDQVN 734
           R+KQHFHHL QY VDLI GCNG IWVGEHVD +D + EDQVN
Sbjct: 191 RRKQHFHHLDQYGVDLIFGCNGLIWVGEHVDVKDAMVEDQVN 232


>ref|NP_171835.1| ribosomal RNA processing protein 4 [Arabidopsis thaliana]
           gi|3850568|gb|AAC72108.1| Similar to hypothetical
           protein SPAC2F7.14c gi|1052797 from Schizosaccharomyces
           pombe cosmid gb|Z50142 [Arabidopsis thaliana]
           gi|34365689|gb|AAQ65156.1| At1g03360 [Arabidopsis
           thaliana] gi|51970606|dbj|BAD43995.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332189442|gb|AEE27563.1| ribosomal RNA processing
           protein 4 [Arabidopsis thaliana]
          Length = 322

 Score =  194 bits (494), Expect(2) = 6e-90
 Identities = 90/128 (70%), Positives = 116/128 (90%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEM 226
           +QLPL+QTQKVR +RA+++L+SL +  NS+ASV V D+IP+N +D+ LKGHGT+E DGE+
Sbjct: 6   LQLPLSQTQKVRFERAIERLQSLSSSANSDASVIVTDSIPVNHDDAFLKGHGTSEVDGEL 65

Query: 227 VATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSS 406
           +AT+CGVVERV+ LVYVR+LRARYKPE+GDIVV RV+EVAQKRW++++NFNQD VLMLSS
Sbjct: 66  LATVCGVVERVDKLVYVRTLRARYKPEVGDIVVGRVIEVAQKRWRVELNFNQDGVLMLSS 125

Query: 407 MNLPDGIQ 430
           MN+PDGIQ
Sbjct: 126 MNMPDGIQ 133



 Score =  163 bits (413), Expect(2) = 6e-90
 Identities = 76/99 (76%), Positives = 87/99 (87%)
 Frame = +3

Query: 429 RRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYLVK 608
           RRRT+VDELNMRN+F E+DV+CAEVRNFQ+DGSLQLQARSQKYGKLEKGQLL V PYLVK
Sbjct: 134 RRRTSVDELNMRNIFVEHDVVCAEVRNFQHDGSLQLQARSQKYGKLEKGQLLKVDPYLVK 193

Query: 609 RQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDIVAED 725
           R K HFH++    +DLI+GCNGFIWVGEHV+ RD +A D
Sbjct: 194 RSKHHFHYVESLGIDLIIGCNGFIWVGEHVEVRDPMAID 232


>ref|XP_004247486.1| PREDICTED: exosome complex component rrp4-like [Solanum
           lycopersicum]
          Length = 325

 Score =  179 bits (455), Expect(2) = 7e-90
 Identities = 90/128 (70%), Positives = 109/128 (85%)
 Frame = +2

Query: 47  IQLPLNQTQKVRLQRALQQLESLHAKVNSEASVTVADTIPINLEDSILKGHGTAERDGEM 226
           IQL  + TQK+RL++AL QLES  +K+NS A+V VAD IP++ ED+ LKGHGT E   ++
Sbjct: 4   IQLSFSNTQKLRLEKALAQLESFSSKLNSNATVIVADKIPVD-EDAALKGHGTLEMGNDV 62

Query: 227 VATICGVVERVNMLVYVRSLRARYKPEIGDIVVARVLEVAQKRWKLDINFNQDAVLMLSS 406
           VA++CGVVERVN LVYVR LRARYKPEIGDI+V RV+EVA KRW+L+INF+QDAVLMLSS
Sbjct: 63  VASVCGVVERVNKLVYVRPLRARYKPEIGDIIVGRVIEVAPKRWRLEINFSQDAVLMLSS 122

Query: 407 MNLPDGIQ 430
           MNLPDGIQ
Sbjct: 123 MNLPDGIQ 130



 Score =  178 bits (451), Expect(2) = 7e-90
 Identities = 81/102 (79%), Positives = 92/102 (90%)
 Frame = +3

Query: 429 RRRTAVDELNMRNVFEENDVICAEVRNFQNDGSLQLQARSQKYGKLEKGQLLTVPPYLVK 608
           RRRTAVDELNMR++F ENDVICAEVR FQ+DGSL LQARSQKYGKLE+G+LL +PPYLVK
Sbjct: 131 RRRTAVDELNMRSIFVENDVICAEVRGFQHDGSLHLQARSQKYGKLERGKLLKIPPYLVK 190

Query: 609 RQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDIVAEDQVN 734
           R+KQHFHHL QY VDLI GCNG IWVGEH+D +D++ EDQVN
Sbjct: 191 RRKQHFHHLDQYGVDLIFGCNGLIWVGEHIDVKDVMVEDQVN 232