BLASTX nr result

ID: Jatropha_contig00016005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00016005
         (761 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   422   e-118
ref|XP_002324295.1| rna-dependent RNA polymerase [Populus tricho...   416   e-116
ref|XP_002308662.1| rna-dependent RNA polymerase [Populus tricho...   402   e-112
gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus pe...   379   e-106
ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   375   e-104
ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   375   e-104
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   375   e-104
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   373   e-104
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...   373   e-104
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   373   e-104
gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]       377   e-104
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   375   e-103
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     368   e-103
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   368   e-102
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   367   e-102
gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [L...   366   e-102
gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus...   367   e-102
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     364   e-102
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   363   e-101
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...   365   e-101

>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  422 bits (1085), Expect(2) = e-118
 Identities = 203/244 (83%), Positives = 217/244 (88%), Gaps = 5/244 (2%)
 Frame = +3

Query: 3    KKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSD 182
            KK LQV+KGTVV+AKNPCLHPGD+RILEAVDAP LHHLHDCLVFPQKGDRPHTNEASGSD
Sbjct: 805  KKKLQVVKGTVVVAKNPCLHPGDIRILEAVDAPELHHLHDCLVFPQKGDRPHTNEASGSD 864

Query: 183  LDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAI 362
            LDGDLYFVTWD+NLIPPSK+SW PMQYDAAEAK LNRPV+HQDIIDFFAKNMVNENLGAI
Sbjct: 865  LDGDLYFVTWDENLIPPSKRSWLPMQYDAAEAKQLNRPVNHQDIIDFFAKNMVNENLGAI 924

Query: 363  CNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEY 542
            CNAHVVHADLSE+GALDENCIKLAELAATAVDFPKTGKLVTMPP+LKPK+YPDFMGKE+Y
Sbjct: 925  CNAHVVHADLSEYGALDENCIKLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEDY 984

Query: 543  QSYKSTKILGRLYRQI-----IXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILE 707
            QSY S KILGRLYRQ+                 SELN + GDIPYD DLEV GS+DYIL+
Sbjct: 985  QSYNSNKILGRLYRQVKDDYNDDDDDDDDAATSSELNLVRGDIPYDKDLEVSGSSDYILD 1044

Query: 708  AWDQ 719
            AWDQ
Sbjct: 1045 AWDQ 1048



 Score = 31.6 bits (70), Expect(2) = e-118
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KCSYDGQLKGLL Q
Sbjct: 1049 KCSYDGQLKGLLAQ 1062


>ref|XP_002324295.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  416 bits (1069), Expect(2) = e-116
 Identities = 198/239 (82%), Positives = 218/239 (91%)
 Frame = +3

Query: 3    KKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSD 182
            +KNLQVIKGTVVIAKNPCLHPGDVR+LEAVD PGLHHL+DCLVFPQKG+RPHTNEASGSD
Sbjct: 808  EKNLQVIKGTVVIAKNPCLHPGDVRVLEAVDVPGLHHLYDCLVFPQKGERPHTNEASGSD 867

Query: 183  LDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAI 362
            LDGDLYFVTWD+NLIPPSK+SW PMQYDAAEAKLL RPV+HQDII+FFAKNMVN+NLGAI
Sbjct: 868  LDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKLLARPVNHQDIIEFFAKNMVNDNLGAI 927

Query: 363  CNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEY 542
            CNAHVVHADLSE+GA D+NC+ LAELAATAVDFPKTGK+V+MPPYLKPKMYPDFMGKEEY
Sbjct: 928  CNAHVVHADLSEYGATDKNCLTLAELAATAVDFPKTGKVVSMPPYLKPKMYPDFMGKEEY 987

Query: 543  QSYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWDQ 719
            QSYKS KILGRLYRQ I           SELN + GDIPYD+DLEV+G++DYI +AWDQ
Sbjct: 988  QSYKSEKILGRLYRQ-IKDAYDEDVAASSELNLVPGDIPYDSDLEVVGASDYISDAWDQ 1045



 Score = 29.6 bits (65), Expect(2) = e-116
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KCSYDGQL GLL Q
Sbjct: 1046 KCSYDGQLNGLLSQ 1059


>ref|XP_002308662.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score =  402 bits (1034), Expect(2) = e-112
 Identities = 191/239 (79%), Positives = 211/239 (88%)
 Frame = +3

Query: 3    KKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSD 182
            KKNLQV+KGTVVIAKNPCLHPGD+RILEAVDAPGLHHL+DCLVFPQKG+RPH NEASGSD
Sbjct: 805  KKNLQVVKGTVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLVFPQKGERPHANEASGSD 864

Query: 183  LDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAI 362
            LDGDLYFVTWD+NLIPPSK+SW PMQYDAAEAK L RPV+HQDI++FFAKNM NENLGAI
Sbjct: 865  LDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQLTRPVNHQDIVEFFAKNMANENLGAI 924

Query: 363  CNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEY 542
            CNAHVV ADLSE+GALDE C+ LAELAATAVDFPKTGK+V+MP  LKPK+YPDFMGKEE+
Sbjct: 925  CNAHVVRADLSEYGALDEKCLTLAELAATAVDFPKTGKIVSMPSDLKPKIYPDFMGKEEH 984

Query: 543  QSYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWDQ 719
            QSYKS KILGRLYRQI            SELN + GDIPYD DLEVLG+ D+I +AWD+
Sbjct: 985  QSYKSKKILGRLYRQIKDAYDDDDVAASSELNFVRGDIPYDLDLEVLGATDFISDAWDR 1043



 Score = 29.6 bits (65), Expect(2) = e-112
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KCSYDGQL GLL Q
Sbjct: 1044 KCSYDGQLNGLLAQ 1057


>gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  379 bits (973), Expect(2) = e-106
 Identities = 179/239 (74%), Positives = 206/239 (86%)
 Frame = +3

Query: 3    KKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSD 182
            ++NLQVIKG VVIAKNPCLHPGD+RILEAVDAPGLHHL+DCLVFPQKGDRPHT+EASGSD
Sbjct: 803  ERNLQVIKGHVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLVFPQKGDRPHTDEASGSD 862

Query: 183  LDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAI 362
            LDGDLYFVTWD+NLIPPSKKSW PMQYD AEAKL  RPV+ QDIIDFF KNM NENLG I
Sbjct: 863  LDGDLYFVTWDENLIPPSKKSWMPMQYDPAEAKLQGRPVTQQDIIDFFVKNMTNENLGPI 922

Query: 363  CNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEY 542
            CNAHVVHAD S++GALD NC+KLAELAA AVDFPKTGK+V++P +LKP++YPDF+GKE+ 
Sbjct: 923  CNAHVVHADRSDYGALDVNCLKLAELAALAVDFPKTGKIVSLPQHLKPRLYPDFLGKEDN 982

Query: 543  QSYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWDQ 719
            QSYKSTKILGRLYR+ +           SEL+    DIPYD DLEV G+AD++ +AW++
Sbjct: 983  QSYKSTKILGRLYRK-VRDAYDEDAATSSELHYFPSDIPYDMDLEVPGAADFVFDAWEK 1040



 Score = 33.1 bits (74), Expect(2) = e-106
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KCSYDGQLKGL+GQ
Sbjct: 1041 KCSYDGQLKGLMGQ 1054


>ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Cicer
            arietinum]
          Length = 1247

 Score =  375 bits (963), Expect(2) = e-104
 Identities = 182/238 (76%), Positives = 201/238 (84%)
 Frame = +3

Query: 6    KNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSDL 185
            K LQV+KG VVIAKNPCLHPGDVR+LEAVD P LHHL+DCLVFPQKG+RPHTNEASGSDL
Sbjct: 850  KTLQVVKGLVVIAKNPCLHPGDVRVLEAVDVPDLHHLYDCLVFPQKGERPHTNEASGSDL 909

Query: 186  DGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAIC 365
            DGDLYFVTWD NLIPPSK+SWTPM+Y A E+KL  R V+ +DIIDFF KNMVNE+LG+IC
Sbjct: 910  DGDLYFVTWDGNLIPPSKRSWTPMEYAAQESKLHTRQVTIRDIIDFFVKNMVNEHLGSIC 969

Query: 366  NAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEYQ 545
            NAHVVHAD S++GALDE CI LAELAATAVDFPKTGKLVTMPP+LKPK+YPDFMGKE +Q
Sbjct: 970  NAHVVHADCSDYGALDEKCIHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEHHQ 1029

Query: 546  SYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWDQ 719
            SYKS KILGRLYRQI             +LNC S DI YD DLEV GSAD+I +AW Q
Sbjct: 1030 SYKSKKILGRLYRQI--KDAYDKDIDAPDLNCASSDIHYDTDLEVPGSADFISDAWYQ 1085



 Score = 32.0 bits (71), Expect(2) = e-104
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KCSYDGQL GLLGQ
Sbjct: 1086 KCSYDGQLSGLLGQ 1099


>ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Cicer
            arietinum] gi|502132369|ref|XP_004501326.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X3 [Cicer
            arietinum]
          Length = 1201

 Score =  375 bits (963), Expect(2) = e-104
 Identities = 182/238 (76%), Positives = 201/238 (84%)
 Frame = +3

Query: 6    KNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSDL 185
            K LQV+KG VVIAKNPCLHPGDVR+LEAVD P LHHL+DCLVFPQKG+RPHTNEASGSDL
Sbjct: 804  KTLQVVKGLVVIAKNPCLHPGDVRVLEAVDVPDLHHLYDCLVFPQKGERPHTNEASGSDL 863

Query: 186  DGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAIC 365
            DGDLYFVTWD NLIPPSK+SWTPM+Y A E+KL  R V+ +DIIDFF KNMVNE+LG+IC
Sbjct: 864  DGDLYFVTWDGNLIPPSKRSWTPMEYAAQESKLHTRQVTIRDIIDFFVKNMVNEHLGSIC 923

Query: 366  NAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEYQ 545
            NAHVVHAD S++GALDE CI LAELAATAVDFPKTGKLVTMPP+LKPK+YPDFMGKE +Q
Sbjct: 924  NAHVVHADCSDYGALDEKCIHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEHHQ 983

Query: 546  SYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWDQ 719
            SYKS KILGRLYRQI             +LNC S DI YD DLEV GSAD+I +AW Q
Sbjct: 984  SYKSKKILGRLYRQI--KDAYDKDIDAPDLNCASSDIHYDTDLEVPGSADFISDAWYQ 1039



 Score = 32.0 bits (71), Expect(2) = e-104
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KCSYDGQL GLLGQ
Sbjct: 1040 KCSYDGQLSGLLGQ 1053


>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Glycine max]
          Length = 1204

 Score =  375 bits (964), Expect(2) = e-104
 Identities = 180/238 (75%), Positives = 203/238 (85%)
 Frame = +3

Query: 6    KNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSDL 185
            KNL V+KG VVIAKNPCLHPGDVR+LEAVDAP LHHL+DCLVFPQKGDRPHTNEASGSDL
Sbjct: 805  KNLHVVKGFVVIAKNPCLHPGDVRVLEAVDAPDLHHLNDCLVFPQKGDRPHTNEASGSDL 864

Query: 186  DGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAIC 365
            DGDLYFVTWD+NLIPPSK+SW PM+Y   E+KLL R V  +DII+FF +NMVNE+LGAIC
Sbjct: 865  DGDLYFVTWDENLIPPSKRSWIPMEYAPQESKLLTRQVMTRDIIEFFVRNMVNEHLGAIC 924

Query: 366  NAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEYQ 545
            NAHVVHAD S++GALDE CI LAELAATAVDFPKTGKLVTMPP+LKPK+YPDFMGKE +Q
Sbjct: 925  NAHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKERHQ 984

Query: 546  SYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWDQ 719
            SY+S KILGRLYR I           +  LN ++GDIPYD DLEV GSAD+I +AW+Q
Sbjct: 985  SYRSNKILGRLYRHIKDAYDEDIEAPY--LNFVTGDIPYDKDLEVPGSADFIADAWEQ 1040



 Score = 31.2 bits (69), Expect(2) = e-104
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KCSYDGQL GL+GQ
Sbjct: 1041 KCSYDGQLSGLIGQ 1054


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  373 bits (958), Expect(2) = e-104
 Identities = 176/239 (73%), Positives = 199/239 (83%)
 Frame = +3

Query: 3    KKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSD 182
            K NL V++GTVVIAKNPCLHPGDVRILEAVDAP LHHL+DCLVFP+ G+RPHTNEASGSD
Sbjct: 804  KNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLVFPRNGERPHTNEASGSD 863

Query: 183  LDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAI 362
            LDGDLYF TWD NLIPPSKKSW PM+Y  AE K L R ++  DI++FFAKNM+NE+LG I
Sbjct: 864  LDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRKITRWDIMEFFAKNMINESLGTI 923

Query: 363  CNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEY 542
            CNAHVVHAD S+HGALDENCI+L+ELAATAVDFPKTGKLVTMPP+LKPK+YPDFMGKE  
Sbjct: 924  CNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEAT 983

Query: 543  QSYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWDQ 719
            QSYKSTKILG++YR+I             ELN   GD+ YD DLEV G+ D+I EAWDQ
Sbjct: 984  QSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQ 1042



 Score = 32.0 bits (71), Expect(2) = e-104
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KCSYDGQL GLLGQ
Sbjct: 1043 KCSYDGQLSGLLGQ 1056


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
            gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
            6 [Cucumis sativus]
          Length = 1197

 Score =  373 bits (958), Expect(2) = e-104
 Identities = 176/239 (73%), Positives = 199/239 (83%)
 Frame = +3

Query: 3    KKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSD 182
            K NL V++GTVVIAKNPCLHPGDVRILEAVDAP LHHL+DCLVFP+ G+RPHTNEASGSD
Sbjct: 804  KNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLVFPRNGERPHTNEASGSD 863

Query: 183  LDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAI 362
            LDGDLYF TWD NLIPPSKKSW PM+Y  AE K L R ++  DI++FFAKNM+NE+LG I
Sbjct: 864  LDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRKITRWDIMEFFAKNMINESLGTI 923

Query: 363  CNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEY 542
            CNAHVVHAD S+HGALDENCI+L+ELAATAVDFPKTGKLVTMPP+LKPK+YPDFMGKE  
Sbjct: 924  CNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEAT 983

Query: 543  QSYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWDQ 719
            QSYKSTKILG++YR+I             ELN   GD+ YD DLEV G+ D+I EAWDQ
Sbjct: 984  QSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQ 1042



 Score = 32.0 bits (71), Expect(2) = e-104
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KCSYDGQL GLLGQ
Sbjct: 1043 KCSYDGQLSGLLGQ 1056


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Glycine max]
          Length = 1204

 Score =  373 bits (957), Expect(2) = e-104
 Identities = 178/238 (74%), Positives = 203/238 (85%)
 Frame = +3

Query: 6    KNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSDL 185
            KNL V+KG V+IAKNPCLHPGDVR+LEAVDAP LHHL+DCLVFPQKGDRPHTNEASGSDL
Sbjct: 805  KNLHVVKGFVIIAKNPCLHPGDVRVLEAVDAPDLHHLNDCLVFPQKGDRPHTNEASGSDL 864

Query: 186  DGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAIC 365
            DGDLYFVTWD+NLIPPSK+SW PM+Y   E+KL  R V  +DII+FF +NMVNE+LGAIC
Sbjct: 865  DGDLYFVTWDENLIPPSKRSWIPMEYAPQESKLKTRQVMTRDIIEFFVRNMVNEHLGAIC 924

Query: 366  NAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEYQ 545
            NAHVVHAD S++GALDE CI LAELAATAVDFPKTGKLVTMPP+LKPK+YPDFMGKE +Q
Sbjct: 925  NAHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKERHQ 984

Query: 546  SYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWDQ 719
            SY+S KILGRLYR+I           +  LN ++GDIPYD DLEV GSAD+I +AW+Q
Sbjct: 985  SYRSKKILGRLYRRIKDAYDEDIDAPY--LNFVTGDIPYDKDLEVPGSADFIADAWEQ 1040



 Score = 32.0 bits (71), Expect(2) = e-104
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KCSYDGQL GLLGQ
Sbjct: 1041 KCSYDGQLSGLLGQ 1054


>gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
          Length = 1197

 Score =  377 bits (968), Expect(2) = e-104
 Identities = 184/237 (77%), Positives = 200/237 (84%)
 Frame = +3

Query: 3    KKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSD 182
            KKN +VI+G VVIAKNPCLHPGD+RILEAVDAPGLHHL+DCLVFPQKG+RPHTNEASGSD
Sbjct: 805  KKNFEVIQGLVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLVFPQKGERPHTNEASGSD 864

Query: 183  LDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAI 362
            LDGDLYFVTW+D LIPP KKSW PMQYD  E K + R V+H+DIIDFFAKNMVNE+LG I
Sbjct: 865  LDGDLYFVTWEDLLIPPGKKSWPPMQYDPGETKEIQREVNHKDIIDFFAKNMVNEHLGTI 924

Query: 363  CNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEY 542
            CNAHVVHADLSE+GALDE CI LAELAATAVDFPKTGK+V+MP  LKPK+YPDFMGKEEY
Sbjct: 925  CNAHVVHADLSEYGALDEKCIHLAELAATAVDFPKTGKIVSMPANLKPKLYPDFMGKEEY 984

Query: 543  QSYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAW 713
            QSYKS KILGRLYR  I           SE+N  S DI YD DLEV GSADYI +AW
Sbjct: 985  QSYKSRKILGRLYRH-IKDVYDEDLSESSEINLDSPDINYDTDLEVTGSADYIDDAW 1040



 Score = 27.7 bits (60), Expect(2) = e-104
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KCSYD QL GLLGQ
Sbjct: 1043 KCSYDRQLIGLLGQ 1056


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
            vesca]
          Length = 1197

 Score =  375 bits (962), Expect(2) = e-103
 Identities = 177/238 (74%), Positives = 203/238 (85%)
 Frame = +3

Query: 6    KNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSDL 185
            KNLQVIKG VV+AKNPCLHPGD+RILEAVDAPGLHHLHDCLVFPQKG RPHT+EASGSDL
Sbjct: 806  KNLQVIKGFVVVAKNPCLHPGDIRILEAVDAPGLHHLHDCLVFPQKGHRPHTDEASGSDL 865

Query: 186  DGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAIC 365
            DGDLYFVTWD+NLIPP KKSW PM+Y+ AEAKL  R V+ QD+I+FF +NMVNENLGAIC
Sbjct: 866  DGDLYFVTWDENLIPPRKKSWQPMEYEPAEAKLSGRSVTSQDLIEFFVRNMVNENLGAIC 925

Query: 366  NAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEYQ 545
            NAHVVH+D SE+GA DENC+KLAELAA AVDFPKTGK+VTMPP+LKPK+YPDFMGK++YQ
Sbjct: 926  NAHVVHSDRSEYGAFDENCLKLAELAAVAVDFPKTGKIVTMPPHLKPKLYPDFMGKQDYQ 985

Query: 546  SYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWDQ 719
            SYKS KILGRLYR+I            SE N +  D+ YD DLEV  +AD+I +AW++
Sbjct: 986  SYKSNKILGRLYRKICDAYDEDVANS-SEQNHVPSDVKYDMDLEVPKAADFIADAWER 1042



 Score = 26.6 bits (57), Expect(2) = e-103
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KCSYD QL+GL+ Q
Sbjct: 1043 KCSYDSQLRGLMTQ 1056


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  368 bits (944), Expect(2) = e-103
 Identities = 178/238 (74%), Positives = 198/238 (83%)
 Frame = +3

Query: 3    KKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSD 182
            KKNLQV+KG VVIAKNPCLHPGDVRILEAVD PGLHHL+DCLVFPQKGDRPH+NEASGSD
Sbjct: 805  KKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGSD 864

Query: 183  LDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAI 362
            LDGDLYFVTWD+NLIPPSKKSW PM Y+ AE K + R V+H DIIDFF+KNMV E+LG I
Sbjct: 865  LDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQMGRQVNHMDIIDFFSKNMVQESLGEI 924

Query: 363  CNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEY 542
            CNAHVVHADLSE GALDE C+KLAELAA AVDFPKTGKLVTMP  LKPKMYPDFMGKEE+
Sbjct: 925  CNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEF 984

Query: 543  QSYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWD 716
            QSYKS KILG+LYRQ +           + L  +  DIPYD+ LE+ GS  +I +AW+
Sbjct: 985  QSYKSKKILGKLYRQ-VKDVCDTEGEVSAGLELVPNDIPYDSSLEIPGSTAFIDDAWN 1041



 Score = 33.1 bits (74), Expect(2) = e-103
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +2

Query: 716  SKCSYDGQLKGLLGQ 760
            SKCSYDGQL GLLGQ
Sbjct: 1042 SKCSYDGQLHGLLGQ 1056


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score =  368 bits (944), Expect(2) = e-102
 Identities = 180/238 (75%), Positives = 198/238 (83%)
 Frame = +3

Query: 3    KKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSD 182
            KKNLQVIKG VVIAKNPCLHPGDVRILEAVD PGLHHL+DCLVFPQKGDRPH+NEASGSD
Sbjct: 806  KKNLQVIKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGSD 865

Query: 183  LDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAI 362
            LDGDLYFVTWD+NLIPPSKKSW PM Y  AEAK L R V H DIIDFF+KNMV E+LG I
Sbjct: 866  LDGDLYFVTWDENLIPPSKKSWMPMDYAPAEAKQLGRQVQHTDIIDFFSKNMVQESLGEI 925

Query: 363  CNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEY 542
            CNAHVVHADLSE GALDE C+KLAELAA AVDFPKTGKLVTMP  LKPKMYPDFMGKE +
Sbjct: 926  CNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEPF 985

Query: 543  QSYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWD 716
            Q+Y+S KILG+LYRQ+I           S L  +  DIPYD ++E+LG  D+I +AW+
Sbjct: 986  QTYESKKILGKLYRQVIDVYDAEGGES-SGLEFVPKDIPYDTNIEILGYEDFIDDAWN 1042



 Score = 32.0 bits (71), Expect(2) = e-102
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KCSYDGQL GLLGQ
Sbjct: 1044 KCSYDGQLNGLLGQ 1057


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  367 bits (942), Expect(2) = e-102
 Identities = 178/238 (74%), Positives = 198/238 (83%)
 Frame = +3

Query: 3    KKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSD 182
            KKNLQV+KG VVIAKNPCLHPGDVRILEAVD PGLHHL+DCLVFPQKGDRPH+NEASGSD
Sbjct: 805  KKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGSD 864

Query: 183  LDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAI 362
            LDGDLYFVTWD+NLIPPSKKSW PM Y+ AE K L R V+H DIIDFF+KNMV E+LG I
Sbjct: 865  LDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEI 924

Query: 363  CNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEY 542
            CNAHVVHADLSE GALDE C+KLAELAA AVDFPKTGKLVTMP  LKPKMYPDFMGKEE+
Sbjct: 925  CNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEF 984

Query: 543  QSYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWD 716
            QSYKS KILG+LYRQ +           + L  +  DIPYD+ LE+ GS  ++ +AW+
Sbjct: 985  QSYKSKKILGKLYRQ-VKDVCDTEGEVSAGLELVPNDIPYDSSLEIPGSTVFMGDAWN 1041



 Score = 31.6 bits (70), Expect(2) = e-102
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KCSYDGQL GLLGQ
Sbjct: 1043 KCSYDGQLHGLLGQ 1056


>gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus]
          Length = 1201

 Score =  366 bits (940), Expect(2) = e-102
 Identities = 177/238 (74%), Positives = 200/238 (84%)
 Frame = +3

Query: 6    KNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSDL 185
            K+LQV+KG VVIAKNPCLHPGDVRILEA+D+P LHHL+DCLVFPQKGDRPHTNEASGSDL
Sbjct: 804  KSLQVVKGYVVIAKNPCLHPGDVRILEAIDSPDLHHLYDCLVFPQKGDRPHTNEASGSDL 863

Query: 186  DGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAIC 365
            DGDLYFVTWDDNLIPPSK+SW PM+YDA E+KL  R V+ +DIIDFF +NMVNENLGAIC
Sbjct: 864  DGDLYFVTWDDNLIPPSKRSWIPMEYDAQESKLQTRKVTSRDIIDFFVRNMVNENLGAIC 923

Query: 366  NAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEYQ 545
            NAHVVHAD S++GALDE CI LAE AA AVDFPKTGKLV MP  LKPK+YPDFMGK+++ 
Sbjct: 924  NAHVVHADSSDYGALDEKCIILAEKAAAAVDFPKTGKLVIMPSELKPKLYPDFMGKDQHM 983

Query: 546  SYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWDQ 719
            SYKS KILGRLYR+I             ELN ++G IPYD +LEV GSAD+I +AW Q
Sbjct: 984  SYKSKKILGRLYRRI--KDAYDKDIDAPELNYVTGAIPYDTELEVPGSADFIADAWKQ 1039



 Score = 32.0 bits (71), Expect(2) = e-102
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KCSYDGQL GLLGQ
Sbjct: 1040 KCSYDGQLSGLLGQ 1053


>gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris]
          Length = 1204

 Score =  367 bits (942), Expect(2) = e-102
 Identities = 176/238 (73%), Positives = 204/238 (85%)
 Frame = +3

Query: 6    KNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSDL 185
            KNLQV+KG VVIAKNPCLHPGDVR+LEAVDAP LHHL+DCLVFPQKGDRPHTNEASGSDL
Sbjct: 805  KNLQVVKGFVVIAKNPCLHPGDVRVLEAVDAPDLHHLYDCLVFPQKGDRPHTNEASGSDL 864

Query: 186  DGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAIC 365
            DGDLYFVTWD++LIPPSK+SW PM+Y A E+KL  R V+ +DIIDFF +NMVNE+LGAIC
Sbjct: 865  DGDLYFVTWDEDLIPPSKRSWIPMEYAAQESKLQTRQVTTRDIIDFFVRNMVNEHLGAIC 924

Query: 366  NAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEYQ 545
            NAHVVHAD S++ ALDE CI LAELAATAVDFPKTGKLVTMP +LKPK+YPDFMGKE++Q
Sbjct: 925  NAHVVHADSSDYDALDEKCIHLAELAATAVDFPKTGKLVTMPYHLKPKLYPDFMGKEKHQ 984

Query: 546  SYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWDQ 719
            SY+S K+LGRLYR+I           +  LN +SGDIPYD DLEV GS+ +I ++W+Q
Sbjct: 985  SYRSKKVLGRLYRRIKDAYDEDIDAPY--LNFVSGDIPYDKDLEVPGSSAFIADSWEQ 1040



 Score = 30.8 bits (68), Expect(2) = e-102
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KC+YDGQL GLLGQ
Sbjct: 1041 KCAYDGQLSGLLGQ 1054


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  364 bits (935), Expect(2) = e-102
 Identities = 178/238 (74%), Positives = 196/238 (82%)
 Frame = +3

Query: 3    KKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSD 182
            KKNLQV+KG VVIAKNPCLHPGDVRILEAVD P L HL+DCLVFPQKGDRPH+NEASGSD
Sbjct: 805  KKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEASGSD 864

Query: 183  LDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAI 362
            LDGDLYFVTWD+NLIPPSKKSW PM Y+ AE K L R V+H DIIDFF+KNMV E+LG I
Sbjct: 865  LDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEI 924

Query: 363  CNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEY 542
            CNAHVVHADLSE GALDE C+KLAELAA AVDFPKTGKLVTMP  LKPKMYPDFMGKEE+
Sbjct: 925  CNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEF 984

Query: 543  QSYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWD 716
            QSYKS KILG+LYRQ +           + L  +  DIPYD  LE+LGS  +I +AW+
Sbjct: 985  QSYKSKKILGKLYRQ-VKDVCDAEGEVSAGLEVVPKDIPYDTTLEILGSTTFIDDAWN 1041



 Score = 33.5 bits (75), Expect(2) = e-102
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +2

Query: 716  SKCSYDGQLKGLLGQ 760
            SKCSYDGQL GLLGQ
Sbjct: 1042 SKCSYDGQLNGLLGQ 1056


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  363 bits (933), Expect(2) = e-101
 Identities = 177/238 (74%), Positives = 196/238 (82%)
 Frame = +3

Query: 3    KKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSD 182
            KKNLQV+KG VVIAKNPCLHPGDVRILEAVD P L HL+DCLVFPQKGDRPH+NEASGSD
Sbjct: 805  KKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEASGSD 864

Query: 183  LDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAI 362
            LDGDLYFVTWD+N+IPPSKKSW PM Y+ AE K L R V+H DIIDFF+KNMV E+LG I
Sbjct: 865  LDGDLYFVTWDENIIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEI 924

Query: 363  CNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEY 542
            CNAHVVHADLSE GALDE C+KLAELAA AVDFPKTGKLVTMP  LKPKMYPDFMGKEE+
Sbjct: 925  CNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEF 984

Query: 543  QSYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWD 716
            QSYKS KILG+LYRQ +           + L  +  DIPYD  LE+LGS  +I +AW+
Sbjct: 985  QSYKSKKILGKLYRQ-VKDVCDAEGEVSAGLEVVPKDIPYDTTLEILGSTTFIDDAWN 1041



 Score = 33.5 bits (75), Expect(2) = e-101
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +2

Query: 716  SKCSYDGQLKGLLGQ 760
            SKCSYDGQL GLLGQ
Sbjct: 1042 SKCSYDGQLNGLLGQ 1056


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
            gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
            6 [Solanum lycopersicum]
          Length = 1197

 Score =  365 bits (936), Expect(2) = e-101
 Identities = 179/238 (75%), Positives = 196/238 (82%)
 Frame = +3

Query: 3    KKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSD 182
            KKNLQV+KG VVIAKNPCLHPGDVRILEAVD PGLHHL+DCLVFPQKGDRPH+NEASGSD
Sbjct: 805  KKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGSD 864

Query: 183  LDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAI 362
            LDGDLYFVTWD+NLIPPSKKSW PM Y  AEAK L R V H DIIDFF KNMV E+LG I
Sbjct: 865  LDGDLYFVTWDENLIPPSKKSWMPMAYAPAEAKQLGRQVQHTDIIDFFLKNMVQESLGEI 924

Query: 363  CNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEY 542
            CNAHVVHADLSE GA+DE C+KLAELAA AVDFPKTGKLVTMP  LKPKMYPDFMGKE +
Sbjct: 925  CNAHVVHADLSEFGAMDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEPF 984

Query: 543  QSYKSTKILGRLYRQIIXXXXXXXXXXFSELNCLSGDIPYDADLEVLGSADYILEAWD 716
            QSY+S KILG+LYRQ+I           S L  +  DIPYD +LE+ G  D+I +AW+
Sbjct: 985  QSYESKKILGKLYRQVIDVYDAEGGES-SGLEYVPKDIPYDTNLEIPGYEDFIDDAWN 1041



 Score = 32.0 bits (71), Expect(2) = e-101
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +2

Query: 719  KCSYDGQLKGLLGQ 760
            KCSYDGQL GLLGQ
Sbjct: 1043 KCSYDGQLNGLLGQ 1056


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