BLASTX nr result

ID: Jatropha_contig00015923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00015923
         (607 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ELW65852.1| Brain-specific homeobox protein like protein [Tup...    59   8e-07

>gb|ELW65852.1| Brain-specific homeobox protein like protein [Tupaia chinensis]
          Length = 1699

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 48/199 (24%), Positives = 67/199 (33%), Gaps = 1/199 (0%)
 Frame = -2

Query: 600 HLYRHNHFPCSHCQSPVVLHLHQQHCCLGYPQNARQQHHIQQDSXXXXXXXXXXXXHNLD 421
           H Y+++H  C HC+    LH H QH           QHH+Q               H+  
Sbjct: 43  HHYQYHHHHCHHCEHHHHLHHHHQH----------HQHHLQHHHHQHHHHHCYHHHHHYQ 92

Query: 420 SRTQQSH*EID*QLLNQDHHYQYHYLVSPKKQHFHSPWHRNQREPGYSTNFGGHQEG-HW 244
                 H        +  HHYQ+H+       H H   H + +   Y  +   H    H 
Sbjct: 93  HHHHHPH-------HHHHHHYQHHH------HHLHHHHHHHYQYHHYHCHHCEHHHHLHH 139

Query: 243 HNQHLGHWDSHMQHQQVPXXXXXXXXXXXXXXXXHRYWQDHIHNQVHYTQMSHKKESHLQ 64
           H+QH  H   H  HQ                   H  +  H H Q H+  + H    H Q
Sbjct: 140 HHQHHQHHLQHHHHQH----------------HHHHCYHHHHHYQHHHHHLYHHHRHHYQ 183

Query: 63  CSETACTYLNPYDHHMNLH 7
                C +    +HH +LH
Sbjct: 184 YHHHHCHHC---EHHHHLH 199


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