BLASTX nr result

ID: Jatropha_contig00015610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00015610
         (515 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    45   9e-08

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 44.7 bits (104), Expect(2) = 9e-08
 Identities = 21/56 (37%), Positives = 35/56 (62%)
 Frame = -2

Query: 400 VDSAIFMAEGKVAYGAVVKDSPGQFLCAFSSWFFGYYSPNMAEAMAVREALVGLNK 233
           VD+AIF  + +   G  V+D  G+FL A ++W+ G   P  AEA+ +R+A++ L +
Sbjct: 69  VDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRDAILWLGQ 124



 Score = 37.0 bits (84), Expect(2) = 9e-08
 Identities = 22/65 (33%), Positives = 31/65 (47%)
 Frame = -1

Query: 245 WLKQEYFIHVDLEMDCREVWLGIXXXXXXXXXXXXXIRDCKLLFSEGIDFKAKWIG*QDN 66
           WL Q    +V LE+DC+ V   I             I DC+ L  +  +FK  ++  Q N
Sbjct: 121 WLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFVRRQAN 180

Query: 65  IVAHS 51
           +VAHS
Sbjct: 181 VVAHS 185


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