BLASTX nr result
ID: Jatropha_contig00015250
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00015250
(390 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc... 43 3e-08
gb|ABA94365.1| retrotransposon protein, putative, unclassified [... 42 9e-08
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group] 43 2e-07
ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group] g... 43 2e-07
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja... 40 1e-06
gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group] 40 1e-06
gb|ABB47203.2| retrotransposon protein, putative, unclassified [... 40 1e-06
ref|XP_004963982.1| PREDICTED: uncharacterized protein LOC101777... 42 2e-06
>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 978
Score = 42.7 bits (99), Expect(2) = 3e-08
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2
Query: 389 YVHQRTGCCDTCIPDQVCRLQQAI*GKKQAPRAWAQRY 276
Y Q +G D P+ VC LQ+++ G KQAPRAW QR+
Sbjct: 633 YCQQPSGFVDPSAPNAVCLLQKSLYGLKQAPRAWYQRF 670
Score = 40.4 bits (93), Expect(2) = 3e-08
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = -3
Query: 262 QIEFYHSVGDLSLSI*KQGPDIAYRVVDEGHVIRTAYSSEFTQHIMRMIGTVKSMTGLKL 83
Q+ F S D SL + K G +IAY ++ +I TA S+ QHI + + +MT L
Sbjct: 676 QLGFTSSASDTSLFVYKDGDNIAYLLLYVDDIILTASSATLLQHITARLHSEFAMTDLGD 735
Query: 82 GHQIMIFSLTNSDPSVATNRRAMLYD 5
H + S+T S + ++R D
Sbjct: 736 LHFFLGISVTRSSDGLFLSQRQYAVD 761
>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1064
Score = 42.0 bits (97), Expect(2) = 9e-08
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = -2
Query: 389 YVHQRTGCCDTCIPDQVCRLQQAI*GKKQAPRAWAQRY 276
Y Q +G D P VC LQ+++ G KQAPRAW QR+
Sbjct: 721 YCQQPSGFVDPSAPTAVCLLQKSLYGLKQAPRAWYQRF 758
Score = 39.7 bits (91), Expect(2) = 9e-08
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = -3
Query: 262 QIEFYHSVGDLSLSI*KQGPDIAYRVVDEGHVIRTAYSSEFTQHIMRMIGTVKSMTGLKL 83
Q+ F S D SL I K G +IAY ++ ++ TA S+ QHI + + +MT L
Sbjct: 764 QLGFTSSASDTSLFIYKDGDNIAYLLLYVDDILLTASSTSLLQHITARLHSEFAMTDLGD 823
Query: 82 GHQIMIFSLTNSDPSVATNRRAMLYD 5
H + S+T S + ++R D
Sbjct: 824 LHFFLGISVTRSADGLFLSQRQYAVD 849
>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1480
Score = 42.7 bits (99), Expect(2) = 2e-07
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2
Query: 389 YVHQRTGCCDTCIPDQVCRLQQAI*GKKQAPRAWAQRY 276
Y Q +G D P+ VC LQ+++ G KQAPRAW QR+
Sbjct: 1089 YYQQPSGFVDPSAPNAVCLLQKSLYGLKQAPRAWYQRF 1126
Score = 37.4 bits (85), Expect(2) = 2e-07
Identities = 25/86 (29%), Positives = 42/86 (48%)
Frame = -3
Query: 262 QIEFYHSVGDLSLSI*KQGPDIAYRVVDEGHVIRTAYSSEFTQHIMRMIGTVKSMTGLKL 83
Q+ F S + SL + K G +IAY ++ +I TA S+ HI + + +MT L
Sbjct: 1132 QLGFTSSASNTSLFVYKDGDNIAYLLLYVDDIILTASSATLLHHITARLHSEFAMTDLGD 1191
Query: 82 GHQIMIFSLTNSDPSVATNRRAMLYD 5
H + S+T S + ++R + D
Sbjct: 1192 LHFFLGISVTRSSDGLFLSQRQYVVD 1217
>ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group]
gi|255676152|dbj|BAH93014.1| Os05g0235100, partial
[Oryza sativa Japonica Group]
Length = 841
Score = 42.7 bits (99), Expect(2) = 2e-07
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2
Query: 389 YVHQRTGCCDTCIPDQVCRLQQAI*GKKQAPRAWAQRY 276
Y Q +G D P+ VC LQ+++ G KQAPRAW QR+
Sbjct: 450 YYQQPSGFVDPSAPNAVCLLQKSLYGLKQAPRAWYQRF 487
Score = 37.4 bits (85), Expect(2) = 2e-07
Identities = 25/86 (29%), Positives = 42/86 (48%)
Frame = -3
Query: 262 QIEFYHSVGDLSLSI*KQGPDIAYRVVDEGHVIRTAYSSEFTQHIMRMIGTVKSMTGLKL 83
Q+ F S + SL + K G +IAY ++ +I TA S+ HI + + +MT L
Sbjct: 493 QLGFTSSASNTSLFVYKDGDNIAYLLLYVDDIILTASSATLLHHITARLHSEFAMTDLGD 552
Query: 82 GHQIMIFSLTNSDPSVATNRRAMLYD 5
H + S+T S + ++R + D
Sbjct: 553 LHFFLGISVTRSSDGLFLSQRQYVVD 578
>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
Length = 1250
Score = 40.0 bits (92), Expect(2) = 1e-06
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = -2
Query: 389 YVHQRTGCCDTCIPDQVCRLQQAI*GKKQAPRAWAQRY 276
Y Q G D P VC LQ+++ G KQAPRAW QR+
Sbjct: 959 YCQQPFGFVDPSEPTAVCLLQKSLYGLKQAPRAWYQRF 996
Score = 37.7 bits (86), Expect(2) = 1e-06
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = -3
Query: 262 QIEFYHSVGDLSLSI*KQGPDIAYRVVDEGHVIRTAYSSEFTQHIMRMIGTVKSMTGLKL 83
Q+ F S D SL I K G ++AY ++ ++ TA S+ QHI + + +MT L
Sbjct: 1002 QLGFTSSASDTSLFIYKDGDNVAYLLLYVDDILLTASSTSLLQHITARLHSEFAMTDLGD 1061
Query: 82 GHQIMIFSLTNS 47
H + S+T S
Sbjct: 1062 LHFFLGISVTRS 1073
>gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group]
Length = 1146
Score = 40.0 bits (92), Expect(2) = 1e-06
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = -2
Query: 389 YVHQRTGCCDTCIPDQVCRLQQAI*GKKQAPRAWAQRY 276
Y Q G D P VC LQ+++ G KQAPRAW QR+
Sbjct: 855 YCQQPFGFVDPSEPTAVCLLQKSLYGLKQAPRAWYQRF 892
Score = 37.7 bits (86), Expect(2) = 1e-06
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = -3
Query: 262 QIEFYHSVGDLSLSI*KQGPDIAYRVVDEGHVIRTAYSSEFTQHIMRMIGTVKSMTGLKL 83
Q+ F S D SL I K G ++AY ++ ++ TA S+ QHI + + +MT L
Sbjct: 898 QLGFTSSASDTSLFIYKDGDNVAYLLLYVDDILLTASSTSLLQHITARLHSEFAMTDLGD 957
Query: 82 GHQIMIFSLTNS 47
H + S+T S
Sbjct: 958 LHFFLGISVTRS 969
>gb|ABB47203.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1050
Score = 40.0 bits (92), Expect(2) = 1e-06
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = -2
Query: 389 YVHQRTGCCDTCIPDQVCRLQQAI*GKKQAPRAWAQRY 276
Y Q G D P VC LQ+++ G KQAPRAW QR+
Sbjct: 759 YCQQPFGFVDPSEPTAVCLLQKSLYGLKQAPRAWYQRF 796
Score = 37.7 bits (86), Expect(2) = 1e-06
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = -3
Query: 262 QIEFYHSVGDLSLSI*KQGPDIAYRVVDEGHVIRTAYSSEFTQHIMRMIGTVKSMTGLKL 83
Q+ F S D SL I K G ++AY ++ ++ TA S+ QHI + + +MT L
Sbjct: 802 QLGFTSSASDTSLFIYKDGDNVAYLLLYVDDILLTASSTSLLQHITARLHSEFAMTDLGD 861
Query: 82 GHQIMIFSLTNS 47
H + S+T S
Sbjct: 862 LHFFLGISVTRS 873
>ref|XP_004963982.1| PREDICTED: uncharacterized protein LOC101777276 [Setaria italica]
Length = 1188
Score = 41.6 bits (96), Expect(2) = 2e-06
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = -2
Query: 389 YVHQRTGCCDTCIPDQVCRLQQAI*GKKQAPRAWAQRY 276
Y Q +G D+ P+ VCRL +++ G KQAPRAW R+
Sbjct: 771 YCSQPSGFVDSSHPNHVCRLNRSLYGLKQAPRAWRTRF 808
Score = 35.4 bits (80), Expect(2) = 2e-06
Identities = 25/85 (29%), Positives = 40/85 (47%)
Frame = -3
Query: 259 IEFYHSVGDLSLSI*KQGPDIAYRVVDEGHVIRTAYSSEFTQHIMRMIGTVKSMTGLKLG 80
I F S D SL +G ++AY ++ ++ TA SS F Q I+ + SMT + L
Sbjct: 815 IGFVESKSDASLFTYYRGSEVAYLLLYVDDIVLTASSSGFLQWIISALCQEFSMTDMGLL 874
Query: 79 HQIMIFSLTNSDPSVATNRRAMLYD 5
H + S+ + ++R L D
Sbjct: 875 HHFLGISVERRGDCLFLSQRQYLLD 899