BLASTX nr result

ID: Jatropha_contig00014776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00014776
         (245 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus co...    89   7e-16
gb|EEE93915.2| EXORIBONUCLEASE 2 family protein [Populus trichoc...    71   1e-10

>ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223551215|gb|EEF52701.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 1113

 Score = 88.6 bits (218), Expect = 7e-16
 Identities = 44/73 (60%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2    PPLSNQNVPVGYDHHQQRGNRYSALDSRGKDSPPPHGAGGLNR--GPRPSHDGANRRPMY 175
            PP  N N P GYD  QQRGNRYS L++RG  +P   GA GL+R   P+P H GANRRP Y
Sbjct: 1033 PPPVNLNFPRGYDQSQQRGNRYSVLETRGSRNPQLPGASGLDRRPPPQPPHGGANRRPQY 1092

Query: 176  PPPGGASRFYQQP 214
            PP GGA+R  QQP
Sbjct: 1093 PPHGGANRRPQQP 1105


>gb|EEE93915.2| EXORIBONUCLEASE 2 family protein [Populus trichocarpa]
          Length = 1052

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 37/66 (56%), Positives = 41/66 (62%)
 Frame = +2

Query: 2    PPLSNQNVPVGYDHHQQRGNRYSALDSRGKDSPPPHGAGGLNRGPRPSHDGANRRPMYPP 181
            PP +N N P G+ HHQQ GNR+S+LDSRG   PP HG G   R P PS  G  R     P
Sbjct: 979  PPPANHNNPRGFGHHQQSGNRFSSLDSRGNKMPPQHG-GANRRQPPPS--GTYRGAQQSP 1035

Query: 182  PGGASR 199
            PGGASR
Sbjct: 1036 PGGASR 1041


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