BLASTX nr result

ID: Jatropha_contig00014750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00014750
         (426 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002720155.1| ycf2 [Jatropha curcas] gi|225544184|ref|YP_0...    63   4e-08
ref|YP_005090221.1| ycf2 gene product (chloroplast) [Ricinus com...    61   2e-07
gb|AEK71532.1| hypothetical chloroplast RF2 [Ochna mossambicensis]     61   2e-07
gb|AEK71492.1| hypothetical chloroplast RF2 [Juglans nigra]            61   2e-07
ref|YP_004327722.1| hypothetical chloroplast RF2 [Hevea brasilie...    61   2e-07
ref|YP_004072505.1| Ycf2 protein [Corynocarpus laevigata] gi|317...    61   2e-07
ref|YP_004021192.1| hypothetical chloroplast RF21 [Castanea moll...    61   2e-07
ref|YP_007375087.1| hypothetical chloroplast RF21 [Quercus rubra...    61   2e-07
gb|ADD30892.1| putative RF2 protein [Euonymus americanus] gi|340...    61   2e-07
ref|YP_001718480.1| Ycf2 [Manihot esculenta] gi|205413003|sp|B1N...    61   2e-07
gb|AGL13474.1| hypothetical chloroplast RF21 (chloroplast) [Liqu...    60   2e-07
gb|AFR25702.1| hypothetical chloroplast RF21 (chloroplast) [Pent...    60   2e-07
ref|YP_008592801.1| Ycf2 (chloroplast) [Camellia cuspidata] gi|5...    60   2e-07
gb|ADZ74778.1| hypothetical chloroplast RF21 [Gossypium sturtianum]    60   2e-07
gb|ADZ74432.1| hypothetical chloroplast RF21 [Gossypium bickii] ...    60   2e-07
gb|AEK71584.1| hypothetical chloroplast RF2 [Tapiscia sinensis]        60   2e-07
gb|AEK71518.1| hypothetical chloroplast RF2 [Melianthus comosus]       60   2e-07
gb|AEK71487.1| hypothetical chloroplast RF2 [Ixerba brexioides]        60   2e-07
gb|AEK71468.1| hypothetical chloroplast RF2 [Crossosoma californ...    60   2e-07
gb|ADZ36356.1| hypothetical protein RF2 [Stewartia malacodendron]      60   2e-07

>ref|YP_002720155.1| ycf2 [Jatropha curcas] gi|225544184|ref|YP_002720174.1| ycf2
           [Jatropha curcas] gi|224979607|gb|ACN72734.1| ycf2
           [Jatropha curcas] gi|224979625|gb|ACN72752.1| ycf2
           [Jatropha curcas]
          Length = 2298

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+EYLEH+I
Sbjct: 791 FLSRTERSMNWDPNAYRYKWSNGSKNFQEYLEHFI 825


>ref|YP_005090221.1| ycf2 gene product (chloroplast) [Ricinus communis]
           gi|372450201|ref|YP_005090239.1| ycf2 gene product
           (chloroplast) [Ricinus communis]
           gi|339516209|gb|AEJ82599.1| Ycf2 [Ricinus communis]
           gi|339516227|gb|AEJ82617.1| Ycf2 [Ricinus communis]
          Length = 2286

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH+I
Sbjct: 797 FLSRTERSMNWDPNAYRYKWSNGSKNFQEHLEHFI 831


>gb|AEK71532.1| hypothetical chloroplast RF2 [Ochna mossambicensis]
          Length = 2264

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH+I
Sbjct: 788 FLSRTERSMNWDPNAYRYKWSNGSKNFQEHLEHFI 822


>gb|AEK71492.1| hypothetical chloroplast RF2 [Juglans nigra]
          Length = 2275

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH+I
Sbjct: 790 FISRTERSMNRDPNAYRYKWSNGSKNFQEHLEHFI 824


>ref|YP_004327722.1| hypothetical chloroplast RF2 [Hevea brasiliensis]
           gi|326909454|ref|YP_004327705.1| hypothetical
           chloroplast RF2 [Hevea brasiliensis]
           gi|308523548|gb|ADO33598.1| hypothetical chloroplast RF2
           [Hevea brasiliensis] gi|308523568|gb|ADO33618.1|
           hypothetical chloroplast RF2 [Hevea brasiliensis]
          Length = 2303

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH+I
Sbjct: 794 FLSRTERSMNWDPNAYRYKWSNGSKNFQEHLEHFI 828


>ref|YP_004072505.1| Ycf2 protein [Corynocarpus laevigata]
           gi|317046232|ref|YP_004072521.1| Ycf2 protein
           [Corynocarpus laevigata] gi|309252933|gb|ADO60353.1|
           Ycf2 protein [Corynocarpus laevigata]
           gi|309252949|gb|ADO60369.1| Ycf2 protein [Corynocarpus
           laevigata]
          Length = 2316

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH+I
Sbjct: 804 FISRTERSMNRDPNAYRYKWSNGSKNFQEHLEHFI 838


>ref|YP_004021192.1| hypothetical chloroplast RF21 [Castanea mollissima]
           gi|313184053|ref|YP_004021209.1| hypothetical
           chloroplast RF21 [Castanea mollissima]
           gi|309321562|gb|ADO65102.1| hypothetical chloroplast
           RF21 [Castanea mollissima] gi|309321580|gb|ADO65120.1|
           hypothetical chloroplast RF21 [Castanea mollissima]
          Length = 2277

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH+I
Sbjct: 795 FISRTERSMNRDPNAYRYKWSNGSKNFQEHLEHFI 829


>ref|YP_007375087.1| hypothetical chloroplast RF21 [Quercus rubra]
           gi|443267372|ref|YP_007375108.1| hypothetical
           chloroplast RF21 [Quercus rubra]
           gi|290489030|gb|ADD30899.1| putative RF2 protein
           [Quercus nigra] gi|340807124|gb|AEK71723.1| hypothetical
           chloroplast RF2 [Quercus nigra]
           gi|441421966|gb|AGC31290.1| hypothetical chloroplast
           RF21 [Quercus rubra] gi|441421987|gb|AGC31311.1|
           hypothetical chloroplast RF21 [Quercus rubra]
          Length = 2277

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH+I
Sbjct: 795 FISRTERSMNRDPNAYRYKWSNGSKNFQEHLEHFI 829


>gb|ADD30892.1| putative RF2 protein [Euonymus americanus]
           gi|340807180|gb|AEK71772.1| hypothetical chloroplast RF2
           [Euonymus americanus]
          Length = 2276

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           + S TERSMN DPNAYRY WSNGNK+F+E+LEH+I
Sbjct: 794 WISRTERSMNRDPNAYRYKWSNGNKNFQEHLEHFI 828


>ref|YP_001718480.1| Ycf2 [Manihot esculenta] gi|205413003|sp|B1NWJ3.1|YCF2_MANES
           RecName: Full=Protein ycf2 gi|157695928|gb|ABV66197.1|
           hypothetical chloroplast RF2 [Manihot esculenta]
          Length = 2312

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH+I
Sbjct: 786 FLSRTERSMNWDPNAYRYKWSNGSKNFQEHLEHFI 820


>gb|AGL13474.1| hypothetical chloroplast RF21 (chloroplast) [Liquidambar formosana]
           gi|491650433|gb|AGL13493.1| hypothetical chloroplast
           RF21 (chloroplast) [Liquidambar formosana]
          Length = 2297

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH++
Sbjct: 797 FISRTERSMNRDPNAYRYKWSNGSKNFQEHLEHFV 831


>gb|AFR25702.1| hypothetical chloroplast RF21 (chloroplast) [Penthorum chinense]
           gi|403226840|gb|AFR25719.1| hypothetical chloroplast
           RF21 (chloroplast) [Penthorum chinense]
          Length = 2312

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH++
Sbjct: 797 FISRTERSMNRDPNAYRYKWSNGSKNFQEHLEHFV 831


>ref|YP_008592801.1| Ycf2 (chloroplast) [Camellia cuspidata]
           gi|552539585|ref|YP_008592822.1| Ycf2 (chloroplast)
           [Camellia cuspidata] gi|537362402|gb|AGU44210.1| Ycf2
           (chloroplast) [Camellia cuspidata]
           gi|537362403|gb|AGU44211.1| Ycf2 (chloroplast) [Camellia
           cuspidata]
          Length = 2292

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH++
Sbjct: 797 FISRTERSMNRDPNAYRYKWSNGSKNFQEHLEHFV 831


>gb|ADZ74778.1| hypothetical chloroplast RF21 [Gossypium sturtianum]
          Length = 2298

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH++
Sbjct: 795 FISRTERSMNRDPNAYRYKWSNGSKNFQEHLEHFV 829


>gb|ADZ74432.1| hypothetical chloroplast RF21 [Gossypium bickii]
           gi|326457193|gb|ADZ74456.1| hypothetical chloroplast
           RF21 [Gossypium bickii]
          Length = 2298

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH++
Sbjct: 795 FISRTERSMNRDPNAYRYKWSNGSKNFQEHLEHFV 829


>gb|AEK71584.1| hypothetical chloroplast RF2 [Tapiscia sinensis]
          Length = 2269

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH++
Sbjct: 790 FISRTERSMNRDPNAYRYKWSNGSKNFQEHLEHFV 824


>gb|AEK71518.1| hypothetical chloroplast RF2 [Melianthus comosus]
          Length = 2272

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH++
Sbjct: 790 FISRTERSMNRDPNAYRYKWSNGSKNFQEHLEHFV 824


>gb|AEK71487.1| hypothetical chloroplast RF2 [Ixerba brexioides]
          Length = 2278

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH++
Sbjct: 790 FLSRTERSMNRDPNAYRYEWSNGSKNFQEHLEHFV 824


>gb|AEK71468.1| hypothetical chloroplast RF2 [Crossosoma californicum]
          Length = 2275

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH++
Sbjct: 787 FISRTERSMNRDPNAYRYKWSNGSKNFQEHLEHFV 821


>gb|ADZ36356.1| hypothetical protein RF2 [Stewartia malacodendron]
          Length = 2304

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +3

Query: 153 FFSMTERSMNGDPNAYRYIWSNGNKSFKEYLEHWI 257
           F S TERSMN DPNAYRY WSNG+K+F+E+LEH++
Sbjct: 799 FISRTERSMNRDPNAYRYKWSNGSKNFQEHLEHFV 833


Top