BLASTX nr result

ID: Jatropha_contig00014650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00014650
         (296 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517154.1| conserved hypothetical protein [Ricinus comm...    75   9e-12
gb|ACU19061.1| unknown [Glycine max] gi|255637474|gb|ACU19064.1|...    57   3e-06

>ref|XP_002517154.1| conserved hypothetical protein [Ricinus communis]
           gi|223543789|gb|EEF45317.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 302

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 33/48 (68%), Positives = 43/48 (89%)
 Frame = +2

Query: 152 LSLKQAISEYENDDQECRPWGRRLSSSMAGFTWGSAVRITLLLLLVAA 295
           + LKQ+ISEYE++++ECRPW R+LSS+MA  TWGSA+RITLL LL+AA
Sbjct: 1   MCLKQSISEYEDNEEECRPWRRKLSSTMASMTWGSALRITLLFLLIAA 48


>gb|ACU19061.1| unknown [Glycine max] gi|255637474|gb|ACU19064.1| unknown [Glycine
           max]
          Length = 78

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/59 (57%), Positives = 37/59 (62%)
 Frame = -3

Query: 294 AATRRRRRVILTAEPHVKPAIEEESLRPQGLHSWSSFSYSDIACFNDKRGLNPPRFARF 118
           AA RRRR VIL  E   K  I   +LR QGLHS SS   S  ACF++ R LNP RFARF
Sbjct: 11  AARRRRRMVILRVEDQEKDII---NLRRQGLHSSSSSCKSGEACFDEDRALNPTRFARF 66


Top