BLASTX nr result
ID: Jatropha_contig00014150
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Jatropha_contig00014150 (624 letters) Database: NCBI-nr (updated 2014/02/11) 35,149,712 sequences; 12,374,887,350 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta... 370 e-100 gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theob... 363 2e-98 gb|ESR36195.1| hypothetical protein CICLE_v10028849mg [Citrus cl... 353 2e-95 emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera] 352 6e-95 ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su... 350 1e-94 ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II su... 347 1e-93 ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II su... 347 1e-93 ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II su... 345 4e-93 gb|EEE87820.2| DNA-directed RNA polymerase II 36 kDa polypeptide... 344 1e-92 ref|XP_002313865.1| predicted protein [Populus trichocarpa] 344 1e-92 gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus pe... 344 1e-92 gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phaseolus... 340 2e-91 ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II su... 336 3e-90 ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerase II su... 336 3e-90 ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ... 335 8e-90 ref|XP_006298158.1| hypothetical protein CARUB_v10014208mg [Caps... 333 2e-89 ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-... 333 2e-89 ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata] gi... 332 4e-89 gb|ESQ51010.1| hypothetical protein EUTSA_v10022739mg [Eutrema s... 332 6e-89 ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerase II su... 331 8e-89 >ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis] gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis] Length = 318 Score = 370 bits (951), Expect = e-100 Identities = 182/196 (92%), Positives = 192/196 (97%), Gaps = 1/196 (0%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 M+GASYQRFP++KIRELKDDYCKF L DTD+SMANALRRVMIAEVPT+AIDLVEIEVNSS Sbjct: 1 MEGASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQC+YCSVEFHLRAKCITDQTLDV Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDV 120 Query: 400 TSKDLYSSDHTVIPVDFSD-SGYESNEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKWS 576 TSKDLYSSDHTV+PVDFSD SGY+S+EQRGIIIVKLRRGQELRL+AIARK IGKDHAKWS Sbjct: 121 TSKDLYSSDHTVVPVDFSDSSGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180 Query: 577 PAATVTFMYEPDIHIN 624 PAATVTFMYEPDIHIN Sbjct: 181 PAATVTFMYEPDIHIN 196 >gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theobroma cacao] Length = 318 Score = 363 bits (932), Expect = 2e-98 Identities = 180/196 (91%), Positives = 190/196 (96%), Gaps = 1/196 (0%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 M+G SYQRFPKVKIRELKDDY KF L DTD+SMANALRRVMIAEVPTIAIDLVEIEVNSS Sbjct: 1 MEGVSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEFHLRAKC+TDQTLDV Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDV 120 Query: 400 TSKDLYSSDHTVIPVDFSDS-GYESNEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKWS 576 TSKDLYSSDHTV+PVDF+DS GY+S+EQRGIIIVKLRRGQELRL+AIARK IGKDHAKWS Sbjct: 121 TSKDLYSSDHTVVPVDFTDSAGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180 Query: 577 PAATVTFMYEPDIHIN 624 PAATVTFMYEP+IHIN Sbjct: 181 PAATVTFMYEPEIHIN 196 >gb|ESR36195.1| hypothetical protein CICLE_v10028849mg [Citrus clementina] Length = 319 Score = 353 bits (907), Expect = 2e-95 Identities = 178/197 (90%), Positives = 189/197 (95%), Gaps = 2/197 (1%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 MDGASYQRFPKVKIRELKDDY KF L DTD+SMANALRRVMIAEVPTIAIDLVEIEVNSS Sbjct: 1 MDGASYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEFHLRAKC +DQTLDV Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120 Query: 400 TSKDLYSSDHTVIPVDFSD-SGYES-NEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKW 573 TSKDLYSSDH+V+PVDF D +GY+S ++QRGIIIVKLRRGQELRL+AIARK IGKDHAKW Sbjct: 121 TSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180 Query: 574 SPAATVTFMYEPDIHIN 624 SPAATVTFMYEP+IHIN Sbjct: 181 SPAATVTFMYEPEIHIN 197 >emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera] Length = 318 Score = 352 bits (902), Expect = 6e-95 Identities = 172/196 (87%), Positives = 188/196 (95%), Gaps = 1/196 (0%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 M+G SYQRFPK+KIRE+KDDY KF L +TD+SMANALRRVMIAEVPT+AIDLVEIEVNSS Sbjct: 1 MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEFHLRAKC+TD+TLDV Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120 Query: 400 TSKDLYSSDHTVIPVDFSD-SGYESNEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKWS 576 TSKDL SSDHTV+PVDFSD SGY+S +++GIIIVKLRRGQELRL+AIARK IGKDHAKWS Sbjct: 121 TSKDLISSDHTVVPVDFSDSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180 Query: 577 PAATVTFMYEPDIHIN 624 PAATVTFMYEP+IHIN Sbjct: 181 PAATVTFMYEPEIHIN 196 >ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis vinifera] Length = 318 Score = 350 bits (899), Expect = 1e-94 Identities = 171/196 (87%), Positives = 188/196 (95%), Gaps = 1/196 (0%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 M+G SYQRFPK+KIRE+KDDY KF L +TD+SMANALRRVMIAEVPT+AIDLVEIEVNSS Sbjct: 1 MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+TD+TLDV Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120 Query: 400 TSKDLYSSDHTVIPVDFSD-SGYESNEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKWS 576 TSKDL SSDHTV+PVDFSD SGY+S +++GIIIVKLRRGQELRL+AIARK IGKDHAKWS Sbjct: 121 TSKDLISSDHTVVPVDFSDSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180 Query: 577 PAATVTFMYEPDIHIN 624 PAATVTFMYEP+IHIN Sbjct: 181 PAATVTFMYEPEIHIN 196 >ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cicer arietinum] Length = 319 Score = 347 bits (891), Expect = 1e-93 Identities = 174/197 (88%), Positives = 184/197 (93%), Gaps = 2/197 (1%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 M+GASY R P+VKIRELKDDY KF L DTD+S+ANALRRVMI+EVPTIAIDLVEIEVNSS Sbjct: 1 MEGASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTIAIDLVEIEVNSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCEYCSVEFHLR KCITDQTLDV Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDV 120 Query: 400 TSKDLYSSDHTVIPVDFS--DSGYESNEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKW 573 TSKDLYSSDHTV+PVDFS S ES++ RGIIIVKLRRGQELRL+AIARK IGKDHAKW Sbjct: 121 TSKDLYSSDHTVVPVDFSADPSSLESSDGRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180 Query: 574 SPAATVTFMYEPDIHIN 624 SPAATVTFMYEPDIHIN Sbjct: 181 SPAATVTFMYEPDIHIN 197 >ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cucumis sativus] Length = 320 Score = 347 bits (890), Expect = 1e-93 Identities = 174/198 (87%), Positives = 185/198 (93%), Gaps = 3/198 (1%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 M+G+SYQRFPKVKIREL+DDY KF L DTD+SMANALRRVMIAEVPTIAIDLVEIEVNSS Sbjct: 1 MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEFHLRAKC +DQTLDV Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120 Query: 400 TSKDLYSSDHTVIPVDFSDSGY---ESNEQRGIIIVKLRRGQELRLKAIARKWIGKDHAK 570 TSKDLYSSDHTV+PVDFSDS E+ + +GIIIVKLRRGQELRL+AIARK IGKDHAK Sbjct: 121 TSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAK 180 Query: 571 WSPAATVTFMYEPDIHIN 624 WSPAATVTFMYEP IHIN Sbjct: 181 WSPAATVTFMYEPSIHIN 198 >ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Fragaria vesca subsp. vesca] Length = 318 Score = 345 bits (886), Expect = 4e-93 Identities = 170/196 (86%), Positives = 186/196 (94%), Gaps = 1/196 (0%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 M+G SYQRFP+VKIRE++ DY KF L DTD+S+ANALRRVMIAEVPT+AIDLVEIE+NSS Sbjct: 1 MEGKSYQRFPRVKIREMRHDYLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEYCSVEFHLRA+C +DQTLDV Sbjct: 61 VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEYCSVEFHLRARCHSDQTLDV 120 Query: 400 TSKDLYSSDHTVIPVDFSD-SGYESNEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKWS 576 TSK+L SSDHTV+PVDFSD SGYE++EQRGIIIVKLRRGQELRL+AIARK IGKDHAKWS Sbjct: 121 TSKELLSSDHTVVPVDFSDASGYEASEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180 Query: 577 PAATVTFMYEPDIHIN 624 PAATVTFMYEPDI IN Sbjct: 181 PAATVTFMYEPDIRIN 196 >gb|EEE87820.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein [Populus trichocarpa] Length = 323 Score = 344 bits (883), Expect = 1e-92 Identities = 174/202 (86%), Positives = 184/202 (91%), Gaps = 7/202 (3%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 M+ SYQRFPK+KIRE+KDDY KF L +TD+SMANALRRVMIAEVPTIAIDLVEIEVNSS Sbjct: 1 MESVSYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 120 Query: 400 TSKDLYSSDHTVIPVDFSDSGYESNE-------QRGIIIVKLRRGQELRLKAIARKWIGK 558 TSKDLYSSDH VIPVDFSD ++N+ QRGIIIVKLRRGQELRL+AIARK IGK Sbjct: 121 TSKDLYSSDHAVIPVDFSDPS-DANDPFDHTETQRGIIIVKLRRGQELRLRAIARKGIGK 179 Query: 559 DHAKWSPAATVTFMYEPDIHIN 624 DHAKWSPAATVTFMYEP+IHIN Sbjct: 180 DHAKWSPAATVTFMYEPEIHIN 201 >ref|XP_002313865.1| predicted protein [Populus trichocarpa] Length = 346 Score = 344 bits (883), Expect = 1e-92 Identities = 174/202 (86%), Positives = 184/202 (91%), Gaps = 7/202 (3%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 M+ SYQRFPK+KIRE+KDDY KF L +TD+SMANALRRVMIAEVPTIAIDLVEIEVNSS Sbjct: 1 MESVSYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 120 Query: 400 TSKDLYSSDHTVIPVDFSDSGYESNE-------QRGIIIVKLRRGQELRLKAIARKWIGK 558 TSKDLYSSDH VIPVDFSD ++N+ QRGIIIVKLRRGQELRL+AIARK IGK Sbjct: 121 TSKDLYSSDHAVIPVDFSDPS-DANDPFDHTETQRGIIIVKLRRGQELRLRAIARKGIGK 179 Query: 559 DHAKWSPAATVTFMYEPDIHIN 624 DHAKWSPAATVTFMYEP+IHIN Sbjct: 180 DHAKWSPAATVTFMYEPEIHIN 201 >gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus persica] Length = 318 Score = 344 bits (882), Expect = 1e-92 Identities = 170/196 (86%), Positives = 185/196 (94%), Gaps = 1/196 (0%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 M+G SYQR P+VKIRE++DDY KF L DTD+S+ANALRRVMIAEVPT+AIDLVEIE+NSS Sbjct: 1 MEGKSYQRLPRVKIREMRDDYMKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCE+CSVEFHLRAKC +DQTLDV Sbjct: 61 VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120 Query: 400 TSKDLYSSDHTVIPVDFSDS-GYESNEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKWS 576 TSKDL SSDHTV+PVDFSDS G ES+EQ+GIIIVKLRRGQELRL+AIARK IGKDHAKWS Sbjct: 121 TSKDLLSSDHTVVPVDFSDSAGMESSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180 Query: 577 PAATVTFMYEPDIHIN 624 PAATVTFMYEPDI IN Sbjct: 181 PAATVTFMYEPDIRIN 196 >gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phaseolus vulgaris] Length = 318 Score = 340 bits (872), Expect = 2e-91 Identities = 168/196 (85%), Positives = 184/196 (93%), Gaps = 1/196 (0%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 M+GASY R P+VKIRELKDDY KF L DTD+S+ANALRRVMIAEVPTIAIDLVEIEVNSS Sbjct: 1 MEGASYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEFHLR KC+TDQTLDV Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDV 120 Query: 400 TSKDLYSSDHTVIPVDFSD-SGYESNEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKWS 576 +SKDLYSSD +V+PVDFSD + +S+E RG+IIVKLRRGQELRL+AIARK IGKDHAKWS Sbjct: 121 SSKDLYSSDPSVVPVDFSDPASTDSSESRGVIIVKLRRGQELRLRAIARKGIGKDHAKWS 180 Query: 577 PAATVTFMYEPDIHIN 624 PAATVTFMYEP+IH+N Sbjct: 181 PAATVTFMYEPEIHLN 196 >ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Solanum lycopersicum] Length = 319 Score = 336 bits (861), Expect = 3e-90 Identities = 162/197 (82%), Positives = 184/197 (93%), Gaps = 2/197 (1%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 M+G SYQRFPK+K+RE+KDD+ KF L DTD+S+ANALRR+MIAEVPTIAIDLVEIEVNSS Sbjct: 1 MEGVSYQRFPKIKVREVKDDFMKFELRDTDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFI+HRLGL+PLTSERAMSMRFSRDCDACDGDGQCEYCSVEF+LR KC++DQTLDV Sbjct: 61 VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120 Query: 400 TSKDLYSSDHTVIPVDFSD--SGYESNEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKW 573 TSKDL SSDHTV+PVD+SD S +++ +GIIIVKLRRGQELRL+AIARK IGKDHAKW Sbjct: 121 TSKDLLSSDHTVVPVDYSDASSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180 Query: 574 SPAATVTFMYEPDIHIN 624 SPAATVTFMYEP+I+IN Sbjct: 181 SPAATVTFMYEPEIYIN 197 >ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Glycine max] Length = 319 Score = 336 bits (861), Expect = 3e-90 Identities = 168/194 (86%), Positives = 179/194 (92%), Gaps = 1/194 (0%) Frame = +1 Query: 46 GASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSSVL 225 G SY R P+VKIRELKDDY KF L DTD+S+ANALRRVMIAEVPT+AIDLVEIEVNSSVL Sbjct: 4 GVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNSSVL 63 Query: 226 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDVTS 405 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEFHLR KC+TDQTLDVTS Sbjct: 64 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDVTS 123 Query: 406 KDLYSSDHTVIPVDFSD-SGYESNEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKWSPA 582 KDLYSSD TV PVDFSD S +S+ RGIIIVKLRRGQEL+L+AIARK IGKDHAKWSPA Sbjct: 124 KDLYSSDPTVSPVDFSDPSATDSDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSPA 183 Query: 583 ATVTFMYEPDIHIN 624 ATVTFMYEP+IHIN Sbjct: 184 ATVTFMYEPEIHIN 197 >ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Solanum tuberosum] Length = 319 Score = 335 bits (858), Expect = 8e-90 Identities = 162/197 (82%), Positives = 184/197 (93%), Gaps = 2/197 (1%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 M+G SYQRFPK+KIRE+KDD+ KF L +TD+S+ANALRR+MIAEVPTIAIDLVEIEVNSS Sbjct: 1 MEGVSYQRFPKIKIREVKDDFMKFELRETDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFI+HRLGL+PLTSERAMSMRFSRDCDACDGDGQCEYCSVEF+LR KC++DQTLDV Sbjct: 61 VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120 Query: 400 TSKDLYSSDHTVIPVDFSD--SGYESNEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKW 573 TSKDL SSDHTV+PVD+SD S +++ +GIIIVKLRRGQELRL+AIARK IGKDHAKW Sbjct: 121 TSKDLLSSDHTVVPVDYSDTSSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180 Query: 574 SPAATVTFMYEPDIHIN 624 SPAATVTFMYEP+I+IN Sbjct: 181 SPAATVTFMYEPEIYIN 197 >ref|XP_006298158.1| hypothetical protein CARUB_v10014208mg [Capsella rubella] gi|482566867|gb|EOA31056.1| hypothetical protein CARUB_v10014208mg [Capsella rubella] Length = 319 Score = 333 bits (854), Expect = 2e-89 Identities = 167/197 (84%), Positives = 181/197 (91%), Gaps = 2/197 (1%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 MDGA+YQRFPKVKIRELKDDY KF L +TD SMANALRRVMI+EVPT+AIDLVEIEVNSS Sbjct: 1 MDGATYQRFPKVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEF L +KC+TDQTLDV Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSSKCVTDQTLDV 120 Query: 400 TSKDLYSSDHTVIPVDFS--DSGYESNEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKW 573 TS+DLYS+D TV PVDF+ S +S+E +GIIIVKLRRGQELRL+AIARK IGKDHAKW Sbjct: 121 TSRDLYSADPTVTPVDFTIDSSASDSSEHKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180 Query: 574 SPAATVTFMYEPDIHIN 624 SPAATVTFMYEPDI IN Sbjct: 181 SPAATVTFMYEPDIIIN 197 >ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula] gi|85719360|gb|ABC75365.1| RNA polymerase, dimerisation [Medicago truncatula] gi|355508950|gb|AES90092.1| DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula] Length = 318 Score = 333 bits (854), Expect = 2e-89 Identities = 169/197 (85%), Positives = 180/197 (91%), Gaps = 2/197 (1%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 M+GASY R P+VKIRELKDDY KF L DTD+S+ANALRRVMI+EVPT+AIDLVEIEVNSS Sbjct: 1 MEGASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTVAIDLVEIEVNSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCEYCSVEFHLR KCITDQTLDV Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDV 120 Query: 400 TSKDLYSSDHTVIPVDF--SDSGYESNEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKW 573 +SKDL SSDHTV PVD D+ ES + RGIIIVKLRRGQELRL+AIARK IGKDHAKW Sbjct: 121 SSKDLISSDHTVTPVDVPGGDASIES-DGRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179 Query: 574 SPAATVTFMYEPDIHIN 624 SPAATVTFMYEPDIHIN Sbjct: 180 SPAATVTFMYEPDIHIN 196 >ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata] gi|297329735|gb|EFH60154.1| RBP36A [Arabidopsis lyrata subsp. lyrata] Length = 319 Score = 332 bits (852), Expect = 4e-89 Identities = 166/197 (84%), Positives = 181/197 (91%), Gaps = 2/197 (1%) Frame = +1 Query: 40 MDGASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSS 219 MDGA+YQRFPK+ IRELKDDY KF L +TD SMANALRRVMI+EVPT+AIDLVEIEVNSS Sbjct: 1 MDGATYQRFPKITIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSS 60 Query: 220 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 399 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEF L AKC+TDQTLDV Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSAKCVTDQTLDV 120 Query: 400 TSKDLYSSDHTVIPVDFS--DSGYESNEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKW 573 TS+DLYS+D TV PVDF+ S +S+EQ+GIIIVKLRRGQEL+L+AIARK IGKDHAKW Sbjct: 121 TSRDLYSADPTVTPVDFTIDSSASDSSEQKGIIIVKLRRGQELKLRAIARKGIGKDHAKW 180 Query: 574 SPAATVTFMYEPDIHIN 624 SPAATVTFMYEPDI IN Sbjct: 181 SPAATVTFMYEPDIIIN 197 >gb|ESQ51010.1| hypothetical protein EUTSA_v10022739mg [Eutrema salsugineum] Length = 369 Score = 332 bits (850), Expect = 6e-89 Identities = 164/195 (84%), Positives = 182/195 (93%), Gaps = 2/195 (1%) Frame = +1 Query: 46 GASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSSVL 225 GASYQRFPKVKIRELKDDY KF L +TD SMANALRRVMI+EVPT+AIDLVEI++NSSVL Sbjct: 53 GASYQRFPKVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIDINSSVL 112 Query: 226 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDVTS 405 NDEFIAHRLGLIPLTSERAMSMR SRDCD+CDGDGQCE+CSVEF L+AKC+TDQTLDVTS Sbjct: 113 NDEFIAHRLGLIPLTSERAMSMRLSRDCDSCDGDGQCEFCSVEFRLQAKCVTDQTLDVTS 172 Query: 406 KDLYSSDHTVIPVDFS--DSGYESNEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKWSP 579 +DLYS+D TV PVDF+ SG +S+EQRGIIIVKLRRGQEL+L+AIARK IGKDHAKWSP Sbjct: 173 RDLYSTDPTVTPVDFTLDSSGTDSSEQRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSP 232 Query: 580 AATVTFMYEPDIHIN 624 A+TVTFMYEPDI+IN Sbjct: 233 ASTVTFMYEPDININ 247 >ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Glycine max] Length = 320 Score = 331 bits (849), Expect = 8e-89 Identities = 168/195 (86%), Positives = 179/195 (91%), Gaps = 2/195 (1%) Frame = +1 Query: 46 GASYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSSVL 225 G SY R P+VKIRELKDDY KF L DTD+S+ANALRRVMIAEVPT+AIDLVEIEVNSSVL Sbjct: 4 GVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNSSVL 63 Query: 226 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDVTS 405 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEFHLR KC+TDQTLDVTS Sbjct: 64 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDVTS 123 Query: 406 KDLYSSDHTVIPVDFSD-SGYES-NEQRGIIIVKLRRGQELRLKAIARKWIGKDHAKWSP 579 KDLYSSD TV PVDFSD S +S + RGIIIVKLRRGQEL+L+AIARK IGKDHAKWSP Sbjct: 124 KDLYSSDPTVSPVDFSDPSATDSPDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSP 183 Query: 580 AATVTFMYEPDIHIN 624 AATVTFMYEP+IHIN Sbjct: 184 AATVTFMYEPEIHIN 198