BLASTX nr result
ID: Jatropha_contig00014131
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00014131
(572 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517272.1| conserved hypothetical protein [Ricinus comm... 70 4e-10
emb|CAB45815.1| putative protein [Arabidopsis thaliana] gi|72688... 68 2e-09
gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi] 64 2e-09
gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor] gi|43780... 62 2e-09
ref|XP_004292078.1| PREDICTED: uncharacterized protein LOC101292... 61 2e-09
gb|ERM96088.1| hypothetical protein AMTR_s04653p00000520, partia... 65 5e-09
gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Jap... 59 1e-08
gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Jap... 59 2e-08
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc... 58 2e-08
gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subc... 58 3e-08
gb|AAP53721.1| retrotransposon protein, putative, Ty3-gypsy subc... 58 3e-08
gb|ABF97503.1| retrotransposon protein, putative, unclassified [... 58 4e-08
gb|AAT81681.1| putative retrotransposon protein [Oryza sativa Ja... 58 4e-08
gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subc... 57 4e-08
gb|AAO23086.1| putative gag-pol precursor [Oryza sativa Japonica... 56 5e-08
ref|NP_001050456.1| Os03g0439900 [Oryza sativa Japonica Group] g... 56 5e-08
gb|ABF96839.1| retrotransposon protein, putative, Ty3-gypsy subc... 56 5e-08
ref|XP_002332728.1| predicted protein [Populus trichocarpa] gi|5... 63 6e-08
gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subc... 57 6e-08
gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group... 57 7e-08
>ref|XP_002517272.1| conserved hypothetical protein [Ricinus communis]
gi|223543535|gb|EEF45065.1| conserved hypothetical
protein [Ricinus communis]
Length = 127
Score = 70.1 bits (170), Expect = 4e-10
Identities = 38/112 (33%), Positives = 64/112 (57%)
Frame = +1
Query: 97 RKRHAREIYSI*AEILAESLYRPIIISEEDA*YVHFPHSDALVIEGVMENYKIRRILVDD 276
RK+ R +YSI + I S+ ++ + H+DALV++ + N+ +R IL+DD
Sbjct: 16 RKQAVRSVYSIAISREPRKNFGLIKFSDANSQGILNSHNDALVVKAYINNFLVRWILIDD 75
Query: 277 SSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDG 432
SS+++ T+ VF ++ L L V P +GL G+ + E SI + ++LGDG
Sbjct: 76 KSSINMITMPVFLSMGLKHNHLTLVSTPFIGLGGKTILVEGSIHLDVELGDG 127
>emb|CAB45815.1| putative protein [Arabidopsis thaliana] gi|7268845|emb|CAB79049.1|
putative protein [Arabidopsis thaliana]
Length = 853
Score = 67.8 bits (164), Expect = 2e-09
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Frame = +1
Query: 91 STRKRHAREIYSI*AEILAESLYR-PIIISEEDA*YVHFPHSDALVIEGVMENYKIRRIL 267
S K+ AR++ S+ AE L + PII + EDA + PH+DALVI+ VME++ + RIL
Sbjct: 437 SALKKRARQVCSVRVAPEAEPLSQEPIIFTSEDASGIQHPHNDALVIKLVMEDFDVERIL 496
Query: 268 VDDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLG 426
+D SSV+L L+ + + +K+ P P+ G G + I++ +++G
Sbjct: 497 IDTGSSVNLMFLKTLFKMGISESKIMPKIRPMTGYDGEAKMSIGEIKLQVQVG 549
>gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi]
Length = 1902
Score = 63.9 bits (154), Expect(2) = 2e-09
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Frame = +1
Query: 97 RKRHAREIYSI*AE---ILAESLYRPIIISEEDA*YVHFPHSDALVIEGVMENYKIRRIL 267
RK HAR ++ + E + PI D +PH+DA+VIE + + + +IL
Sbjct: 619 RKEHARRVHHVAVEGPHKFGRWSHIPITFDSRDMKLRDYPHTDAMVIETNLAGWTVTKIL 678
Query: 268 VDDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTRA 447
VD SS + F ++KLD L+P PL G G+ V A I + + GD + R
Sbjct: 679 VDTGSSADILFASTFDSMKLDRNLLQPADNPLYGFGGQQVRAVGKISLPVTFGDQINCRT 738
Query: 448 KTLS 459
+ ++
Sbjct: 739 EHIT 742
Score = 23.5 bits (49), Expect(2) = 2e-09
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 459 FVVIDIPFPYNAILNR 506
F V+D+ +PYNAI R
Sbjct: 743 FDVVDMFYPYNAIFGR 758
>gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor] gi|4378066|gb|AAD19359.1| polyprotein
[Sorghum bicolor]
Length = 1877
Score = 62.4 bits (150), Expect(2) = 2e-09
Identities = 32/96 (33%), Positives = 51/96 (53%)
Frame = +1
Query: 163 PIIISEEDA*YVHFPHSDALVIEGVMENYKIRRILVDDSSSVHLTTLEVFKALKLDVTKL 342
PI +EED +PH+DALVI + + + RILVD SS + F +KL ++L
Sbjct: 619 PITFTEEDLRLESYPHTDALVITTNVAGWGVSRILVDSGSSADIIFAGTFDQMKLSRSQL 678
Query: 343 KPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTRAK 450
+P PL+G G+ + A + + + G E+ R +
Sbjct: 679 QPSESPLIGFGGKQIHALGKVALPVSFGTTENARTE 714
Score = 25.0 bits (53), Expect(2) = 2e-09
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 459 FVVIDIPFPYNAILNRHCSTPWVPARQSGIL 551
F V+D+ +PYNAI R + A G L
Sbjct: 718 FDVVDLHYPYNAIFGRGFLNKFNAAAHMGYL 748
>ref|XP_004292078.1| PREDICTED: uncharacterized protein LOC101292967 [Fragaria vesca
subsp. vesca]
Length = 257
Score = 61.2 bits (147), Expect(2) = 2e-09
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Frame = +1
Query: 76 RRRYYSTRKRHAREIYSI*AEILAESLYRP-----IIISEEDA*YVHFPHSDALVIEGVM 240
R R R+ R + +I E+ E+ RP I S++DA V F H DALV+ +
Sbjct: 55 RLRSEIRREEKIRRVCAIEKEVNLEA--RPGQELVISFSKQDAVGVQFSHRDALVVSVQV 112
Query: 241 ENYKIRRILVDDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIK 420
N +RR+++D+ SS + L+ F+ LKL +KP R PL G G I +++
Sbjct: 113 ANCLMRRVMIDEGSSAEVMFLDAFRQLKLGDNHIKPSRAPLTGFEGTETWPMGEITLLVT 172
Query: 421 LGD 429
+ D
Sbjct: 173 IAD 175
Score = 26.2 bits (56), Expect(2) = 2e-09
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 456 EFVVIDIPFPYNAILNR 506
+FVV+D P YNAIL R
Sbjct: 181 DFVVVDRPSSYNAILGR 197
>gb|ERM96088.1| hypothetical protein AMTR_s04653p00000520, partial [Amborella
trichopoda]
Length = 563
Score = 64.7 bits (156), Expect(2) = 5e-09
Identities = 37/98 (37%), Positives = 56/98 (57%)
Frame = +1
Query: 166 IIISEEDA*YVHFPHSDALVIEGVMENYKIRRILVDDSSSVHLTTLEVFKALKLDVTKLK 345
I+ E DA +VH PHSDALVI + + RILVD+ SSV+L + FK + L L+
Sbjct: 257 IVFMESDARWVHHPHSDALVIVANIGGDNVHRILVDNGSSVNLLNFQAFKQMGLQEKDLR 316
Query: 346 PVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTRAKTLS 459
P+ + G G ++ + I++ I LG T AK+++
Sbjct: 317 PMTSSIYGFTGDVIAIKGMIKLPITLGTAPIT-AKSMA 353
Score = 21.6 bits (44), Expect(2) = 5e-09
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 453 AEFVVIDIPFPYNAILNR 506
A+F VID YNA++ R
Sbjct: 353 ADFAVIDQYSAYNAVIGR 370
>gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Japonica Group]
gi|31431922|gb|AAP53628.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1292
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Frame = +1
Query: 88 YSTRKRHAREIYSI*A--EILAESLYRPIIISEEDA*YVHFPHSDALVIEGVMENYKIRR 261
+ +K R ++SI + E + L + I EDA V FPH D LVI + +++RR
Sbjct: 317 HKKKKMQTRMVHSITSAGEGAPQYLNQLISFGPEDAEGVIFPHQDPLVISAEIAGFEVRR 376
Query: 262 ILVDDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHT 441
ILVD SS + E + + L L P + L G G V ++I G GE+
Sbjct: 377 ILVDGGSSADVIFAEAYAKMGLPTQALTPAPVSLRGFGGEAVQVLGQTLLLIAFGSGENR 436
Query: 442 RAKTL 456
R + +
Sbjct: 437 REEQI 441
Score = 25.4 bits (54), Expect(2) = 1e-08
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 459 FVVIDIPFPYNAILNR 506
F V+DIP+ YNAI R
Sbjct: 443 FDVVDIPYNYNAIFGR 458
>gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Japonica Group]
Length = 1291
Score = 58.9 bits (141), Expect(2) = 2e-08
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +1
Query: 97 RKRHAREIYSI*A--EILAESLYRPIIISEEDA*YVHFPHSDALVIEGVMENYKIRRILV 270
+K R ++SI + E + L + I EDA V FPH D LVI + +++RRILV
Sbjct: 387 KKMQTRMVHSITSAGEGAPQYLNQLISFGPEDAEGVIFPHQDPLVISAEIAGFEVRRILV 446
Query: 271 DDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTRAK 450
D SS + E + + L L P + L G G V ++I G GE+ R +
Sbjct: 447 DGGSSADVIFAEAYAKMGLPTQALTPAPVSLRGFGGEAVQVLGQTLLLIAFGSGENRREE 506
Query: 451 TL 456
+
Sbjct: 507 QI 508
Score = 25.4 bits (54), Expect(2) = 2e-08
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 459 FVVIDIPFPYNAILNR 506
F V+DIP+ YNAI R
Sbjct: 510 FDVVDIPYNYNAIFGR 525
>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1980
Score = 57.8 bits (138), Expect(2) = 2e-08
Identities = 33/127 (25%), Positives = 62/127 (48%)
Frame = +1
Query: 76 RRRYYSTRKRHAREIYSI*AEILAESLYRPIIISEEDA*YVHFPHSDALVIEGVMENYKI 255
+R+ Y + H IY + ++++ I EDA + FPH D LV+ + ++
Sbjct: 710 QRKAYVRQVNHVGTIYQSKPPVYSKTV---ISFGPEDAEGILFPHQDPLVVSVEIAQCEV 766
Query: 256 RRILVDDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGE 435
+R+L+D SS + + FK +++ +L +PL G G+ V A I + + G G
Sbjct: 767 QRVLIDGGSSADVLFYDAFKKMQIPEDRLTNAGVPLQGFGGQQVHAIGKISLQVVFGKGT 826
Query: 436 HTRAKTL 456
+ R + +
Sbjct: 827 NVRKEEI 833
Score = 26.2 bits (56), Expect(2) = 2e-08
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 459 FVVIDIPFPYNAILNR 506
F V+D+P+ YNAIL R
Sbjct: 835 FDVVDMPYQYNAILGR 850
>gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2035
Score = 58.2 bits (139), Expect(2) = 3e-08
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Frame = +1
Query: 97 RKRHAREIYSI*A--EILAESLYRPIIISEEDA*YVHFPHSDALVIEGVMENYKIRRILV 270
+K R ++SI + E + L + I EDA V FPH D LVI + +++RRILV
Sbjct: 824 KKMQIRMVHSITSAGEGAPQYLNQLISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILV 883
Query: 271 DDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTRAK 450
D SS + E + + L L P L G G V ++I G GE+ R +
Sbjct: 884 DGGSSADVIFAEAYATMGLPTQSLTPAPTSLHGFGGEAVQVLGQALLLIAFGSGENRREE 943
Query: 451 TL 456
+
Sbjct: 944 QI 945
Score = 25.4 bits (54), Expect(2) = 3e-08
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 459 FVVIDIPFPYNAILNR 506
F V+DIP+ YNAI R
Sbjct: 947 FDVVDIPYNYNAIFGR 962
>gb|AAP53721.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1260
Score = 58.2 bits (139), Expect(2) = 3e-08
Identities = 33/97 (34%), Positives = 47/97 (48%)
Frame = +1
Query: 154 LYRPIIISEEDA*YVHFPHSDALVIEGVMENYKIRRILVDDSSSVHLTTLEVFKALKLDV 333
L + I EDA V FPH D LVI + +++RRILVD SS + E + + L
Sbjct: 384 LNQQISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPT 443
Query: 334 TKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTR 444
L P L G G+ V ++++ G GE+ R
Sbjct: 444 LALTPAPASLRGFGGKAVQVLGQAQLLVAFGTGENRR 480
Score = 25.4 bits (54), Expect(2) = 3e-08
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 459 FVVIDIPFPYNAILNR 506
F V+DIP+ YNAI R
Sbjct: 486 FDVVDIPYNYNAIFGR 501
>gb|ABF97503.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1172
Score = 57.8 bits (138), Expect(2) = 4e-08
Identities = 31/89 (34%), Positives = 44/89 (49%)
Frame = +1
Query: 178 EEDA*YVHFPHSDALVIEGVMENYKIRRILVDDSSSVHLTTLEVFKALKLDVTKLKPVRI 357
+EDA V FPH D LVI + +++RRILVD SS + E + + L L P
Sbjct: 361 QEDAEGVTFPHQDPLVISAEIAGFEVRRILVDGGSSTDVIFAEAYAKMGLTTQALTPAPT 420
Query: 358 PLVGLAGR*VSAEASIEIVIKLGDGEHTR 444
L G G V ++++ G GE+ R
Sbjct: 421 SLRGFGGEAVQVLGQAQLIVAFGTGENRR 449
Score = 25.4 bits (54), Expect(2) = 4e-08
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 459 FVVIDIPFPYNAILNR 506
F V+DIP+ YNAI R
Sbjct: 455 FDVVDIPYNYNAIFGR 470
>gb|AAT81681.1| putative retrotransposon protein [Oryza sativa Japonica Group]
Length = 1168
Score = 57.8 bits (138), Expect(2) = 4e-08
Identities = 31/89 (34%), Positives = 44/89 (49%)
Frame = +1
Query: 178 EEDA*YVHFPHSDALVIEGVMENYKIRRILVDDSSSVHLTTLEVFKALKLDVTKLKPVRI 357
+EDA V FPH D LVI + +++RRILVD SS + E + + L L P
Sbjct: 357 QEDAEGVTFPHQDPLVISAEIAGFEVRRILVDGGSSTDVIFAEAYAKMGLTTQALTPAPT 416
Query: 358 PLVGLAGR*VSAEASIEIVIKLGDGEHTR 444
L G G V ++++ G GE+ R
Sbjct: 417 SLRGFGGEAVQVLGQAQLIVAFGTGENRR 445
Score = 25.4 bits (54), Expect(2) = 4e-08
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 459 FVVIDIPFPYNAILNR 506
F V+DIP+ YNAI R
Sbjct: 451 FDVVDIPYNYNAIFGR 466
>gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 504
Score = 57.0 bits (136), Expect(2) = 4e-08
Identities = 32/93 (34%), Positives = 48/93 (51%)
Frame = +1
Query: 166 IIISEEDA*YVHFPHSDALVIEGVMENYKIRRILVDDSSSVHLTTLEVFKALKLDVTKLK 345
I EDA + FPH D LVI + +++R+LVD SS + + FK +++ +L
Sbjct: 88 ISFGPEDAEGILFPHQDPLVISVEITQCEVQRVLVDGGSSADVLFYDAFKKMQIPEDRLT 147
Query: 346 PVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTR 444
IPL G G+ V A I + + G GE+ R
Sbjct: 148 HAGIPLQGFGGQQVHAIGKISLQVVFGGGENKR 180
Score = 26.2 bits (56), Expect(2) = 4e-08
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 459 FVVIDIPFPYNAILNR 506
F V+D+P+ YNAIL R
Sbjct: 186 FDVVDMPYQYNAILGR 201
>gb|AAO23086.1| putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 971
Score = 55.8 bits (133), Expect(2) = 5e-08
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Frame = +1
Query: 97 RKRHAREIYSI*AEILAESLYRPIIIS--EEDA*YVHFPHSDALVIEGVMENYKIRRILV 270
+K H R ++SI + Y +IS EDA V FPH D LVI + +++ RILV
Sbjct: 690 KKMHIRAVHSITSAGKRAPQYVNQLISFGPEDAEGVMFPHQDPLVISAEIAGFEVWRILV 749
Query: 271 DDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTR 444
D SS + +E + + L L P + G G V ++I G GE+ R
Sbjct: 750 DGGSSADVIFVEAYAKMGLPTQALTPAPASIRGFGGEAVQVLGQALLLIAFGSGENRR 807
Score = 26.9 bits (58), Expect(2) = 5e-08
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 459 FVVIDIPFPYNAILNR 506
F V+DIP+ YNAIL R
Sbjct: 813 FDVVDIPYNYNAILGR 828
>ref|NP_001050456.1| Os03g0439900 [Oryza sativa Japonica Group]
gi|113548927|dbj|BAF12370.1| Os03g0439900, partial
[Oryza sativa Japonica Group]
Length = 420
Score = 55.8 bits (133), Expect(2) = 5e-08
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Frame = +1
Query: 97 RKRHAREIYSI*AEILAESLYRPIIIS--EEDA*YVHFPHSDALVIEGVMENYKIRRILV 270
+K H R ++SI + Y +IS EDA V FPH D LVI + +++ RILV
Sbjct: 139 KKMHIRAVHSITSAGKRAPQYVNQLISFGPEDAEGVMFPHQDPLVISAEIAGFEVWRILV 198
Query: 271 DDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTR 444
D SS + +E + + L L P + G G V ++I G GE+ R
Sbjct: 199 DGGSSADVIFVEAYAKMGLPTQALTPAPASIRGFGGEAVQVLGQALLLIAFGSGENRR 256
Score = 26.9 bits (58), Expect(2) = 5e-08
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 459 FVVIDIPFPYNAILNR 506
F V+DIP+ YNAIL R
Sbjct: 262 FDVVDIPYNYNAILGR 277
>gb|ABF96839.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 406
Score = 55.8 bits (133), Expect(2) = 5e-08
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Frame = +1
Query: 97 RKRHAREIYSI*AEILAESLYRPIIIS--EEDA*YVHFPHSDALVIEGVMENYKIRRILV 270
+K H R ++SI + Y +IS EDA V FPH D LVI + +++ RILV
Sbjct: 125 KKMHIRAVHSITSAGKRAPQYVNQLISFGPEDAEGVMFPHQDPLVISAEIAGFEVWRILV 184
Query: 271 DDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTR 444
D SS + +E + + L L P + G G V ++I G GE+ R
Sbjct: 185 DGGSSADVIFVEAYAKMGLPTQALTPAPASIRGFGGEAVQVLGQALLLIAFGSGENRR 242
Score = 26.9 bits (58), Expect(2) = 5e-08
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 459 FVVIDIPFPYNAILNR 506
F V+DIP+ YNAIL R
Sbjct: 248 FDVVDIPYNYNAILGR 263
>ref|XP_002332728.1| predicted protein [Populus trichocarpa] gi|550336505|gb|ERP59548.1|
hypothetical protein POPTR_0006s17660g [Populus
trichocarpa]
Length = 150
Score = 62.8 bits (151), Expect = 6e-08
Identities = 36/117 (30%), Positives = 61/117 (52%)
Frame = +1
Query: 151 SLYRPIIISEEDA*YVHFPHSDALVIEGVMENYKIRRILVDDSSSVHLTTLEVFKALKLD 330
S + PI + D + +PH DALVI VME +++ + LVDD S +++ + E + +D
Sbjct: 24 SWHEPITFTPADGQGIKYPHEDALVISTVMEGHRVHKTLVDDDSLMNILSAEAMTKIGMD 83
Query: 331 VTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTRAKTLSL***IFHSHTTPSS 501
++ V PL+G+ G V + + +++ +G +L I SHTTP S
Sbjct: 84 AFRMTIVPTPLIGIEGSAVLMKGAEGLIVTMGTAPCCVTLQQTLWLLIPISHTTPLS 140
>gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1767
Score = 57.0 bits (136), Expect(2) = 6e-08
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Frame = +1
Query: 97 RKRHAREIYSI*A--EILAESLYRPIIISEEDA*YVHFPHSDALVIEGVMENYKIRRILV 270
RK R ++SI + E + + + I EDA V FPH D LVI + +++RRILV
Sbjct: 658 RKMQIRMVHSITSAGEGAPQYVNQLISFGPEDAEGVLFPHQDPLVISAEIAGFEVRRILV 717
Query: 271 DDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTRAK 450
D SS + E + + L L P L G G V ++I G GE+ R +
Sbjct: 718 DGGSSADVIFAEAYAKMGLPTQTLAPAPTSLRGFGGEAVQVLGQALLLIAFGSGENRREE 777
Query: 451 TL 456
+
Sbjct: 778 QI 779
Score = 25.4 bits (54), Expect(2) = 6e-08
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 459 FVVIDIPFPYNAILNR 506
F V+DIP+ YNAI R
Sbjct: 781 FDVVDIPYNYNAIFGR 796
>gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981311|gb|AAT07629.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1459
Score = 56.6 bits (135), Expect(2) = 7e-08
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Frame = +1
Query: 97 RKRHAREIYSI*AEILA-ESLYRPIIIS--EEDA*YVHFPHSDALVIEGVMENYKIRRIL 267
RK + R+I+ + + Y +IS EDA + FPH D LVI + +++R+L
Sbjct: 228 RKAYVRQIHHVGTSYQSVPPAYSNTVISFGPEDAEGILFPHQDPLVISVEIAQCEVQRVL 287
Query: 268 VDDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTR 444
VD SS + + FK +++ +L IPL G G V I + + G GE+ R
Sbjct: 288 VDGGSSADVLFYDAFKKMQIPEDRLTHAGIPLQGFGGHQVHTIGKISLQVVFGGGENKR 346
Score = 25.8 bits (55), Expect(2) = 7e-08
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 459 FVVIDIPFPYNAILNR 506
F V+D+P+ YNA+L R
Sbjct: 352 FDVVDMPYQYNAVLGR 367