BLASTX nr result

ID: Jatropha_contig00014131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00014131
         (572 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517272.1| conserved hypothetical protein [Ricinus comm...    70   4e-10
emb|CAB45815.1| putative protein [Arabidopsis thaliana] gi|72688...    68   2e-09
gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi]             64   2e-09
gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor] gi|43780...    62   2e-09
ref|XP_004292078.1| PREDICTED: uncharacterized protein LOC101292...    61   2e-09
gb|ERM96088.1| hypothetical protein AMTR_s04653p00000520, partia...    65   5e-09
gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Jap...    59   1e-08
gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Jap...    59   2e-08
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...    58   2e-08
gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subc...    58   3e-08
gb|AAP53721.1| retrotransposon protein, putative, Ty3-gypsy subc...    58   3e-08
gb|ABF97503.1| retrotransposon protein, putative, unclassified [...    58   4e-08
gb|AAT81681.1| putative retrotransposon protein [Oryza sativa Ja...    58   4e-08
gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subc...    57   4e-08
gb|AAO23086.1| putative gag-pol precursor [Oryza sativa Japonica...    56   5e-08
ref|NP_001050456.1| Os03g0439900 [Oryza sativa Japonica Group] g...    56   5e-08
gb|ABF96839.1| retrotransposon protein, putative, Ty3-gypsy subc...    56   5e-08
ref|XP_002332728.1| predicted protein [Populus trichocarpa] gi|5...    63   6e-08
gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subc...    57   6e-08
gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group...    57   7e-08

>ref|XP_002517272.1| conserved hypothetical protein [Ricinus communis]
           gi|223543535|gb|EEF45065.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 127

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 38/112 (33%), Positives = 64/112 (57%)
 Frame = +1

Query: 97  RKRHAREIYSI*AEILAESLYRPIIISEEDA*YVHFPHSDALVIEGVMENYKIRRILVDD 276
           RK+  R +YSI         +  I  S+ ++  +   H+DALV++  + N+ +R IL+DD
Sbjct: 16  RKQAVRSVYSIAISREPRKNFGLIKFSDANSQGILNSHNDALVVKAYINNFLVRWILIDD 75

Query: 277 SSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDG 432
            SS+++ T+ VF ++ L    L  V  P +GL G+ +  E SI + ++LGDG
Sbjct: 76  KSSINMITMPVFLSMGLKHNHLTLVSTPFIGLGGKTILVEGSIHLDVELGDG 127


>emb|CAB45815.1| putative protein [Arabidopsis thaliana] gi|7268845|emb|CAB79049.1|
           putative protein [Arabidopsis thaliana]
          Length = 853

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
 Frame = +1

Query: 91  STRKRHAREIYSI*AEILAESLYR-PIIISEEDA*YVHFPHSDALVIEGVMENYKIRRIL 267
           S  K+ AR++ S+     AE L + PII + EDA  +  PH+DALVI+ VME++ + RIL
Sbjct: 437 SALKKRARQVCSVRVAPEAEPLSQEPIIFTSEDASGIQHPHNDALVIKLVMEDFDVERIL 496

Query: 268 VDDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLG 426
           +D  SSV+L  L+    + +  +K+ P   P+ G  G    +   I++ +++G
Sbjct: 497 IDTGSSVNLMFLKTLFKMGISESKIMPKIRPMTGYDGEAKMSIGEIKLQVQVG 549


>gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi]
          Length = 1902

 Score = 63.9 bits (154), Expect(2) = 2e-09
 Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
 Frame = +1

Query: 97  RKRHAREIYSI*AE---ILAESLYRPIIISEEDA*YVHFPHSDALVIEGVMENYKIRRIL 267
           RK HAR ++ +  E         + PI     D     +PH+DA+VIE  +  + + +IL
Sbjct: 619 RKEHARRVHHVAVEGPHKFGRWSHIPITFDSRDMKLRDYPHTDAMVIETNLAGWTVTKIL 678

Query: 268 VDDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTRA 447
           VD  SS  +     F ++KLD   L+P   PL G  G+ V A   I + +  GD  + R 
Sbjct: 679 VDTGSSADILFASTFDSMKLDRNLLQPADNPLYGFGGQQVRAVGKISLPVTFGDQINCRT 738

Query: 448 KTLS 459
           + ++
Sbjct: 739 EHIT 742



 Score = 23.5 bits (49), Expect(2) = 2e-09
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 459 FVVIDIPFPYNAILNR 506
           F V+D+ +PYNAI  R
Sbjct: 743 FDVVDMFYPYNAIFGR 758


>gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor] gi|4378066|gb|AAD19359.1| polyprotein
           [Sorghum bicolor]
          Length = 1877

 Score = 62.4 bits (150), Expect(2) = 2e-09
 Identities = 32/96 (33%), Positives = 51/96 (53%)
 Frame = +1

Query: 163 PIIISEEDA*YVHFPHSDALVIEGVMENYKIRRILVDDSSSVHLTTLEVFKALKLDVTKL 342
           PI  +EED     +PH+DALVI   +  + + RILVD  SS  +     F  +KL  ++L
Sbjct: 619 PITFTEEDLRLESYPHTDALVITTNVAGWGVSRILVDSGSSADIIFAGTFDQMKLSRSQL 678

Query: 343 KPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTRAK 450
           +P   PL+G  G+ + A   + + +  G  E+ R +
Sbjct: 679 QPSESPLIGFGGKQIHALGKVALPVSFGTTENARTE 714



 Score = 25.0 bits (53), Expect(2) = 2e-09
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 459 FVVIDIPFPYNAILNRHCSTPWVPARQSGIL 551
           F V+D+ +PYNAI  R     +  A   G L
Sbjct: 718 FDVVDLHYPYNAIFGRGFLNKFNAAAHMGYL 748


>ref|XP_004292078.1| PREDICTED: uncharacterized protein LOC101292967 [Fragaria vesca
           subsp. vesca]
          Length = 257

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
 Frame = +1

Query: 76  RRRYYSTRKRHAREIYSI*AEILAESLYRP-----IIISEEDA*YVHFPHSDALVIEGVM 240
           R R    R+   R + +I  E+  E+  RP     I  S++DA  V F H DALV+   +
Sbjct: 55  RLRSEIRREEKIRRVCAIEKEVNLEA--RPGQELVISFSKQDAVGVQFSHRDALVVSVQV 112

Query: 241 ENYKIRRILVDDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIK 420
            N  +RR+++D+ SS  +  L+ F+ LKL    +KP R PL G  G        I +++ 
Sbjct: 113 ANCLMRRVMIDEGSSAEVMFLDAFRQLKLGDNHIKPSRAPLTGFEGTETWPMGEITLLVT 172

Query: 421 LGD 429
           + D
Sbjct: 173 IAD 175



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 456 EFVVIDIPFPYNAILNR 506
           +FVV+D P  YNAIL R
Sbjct: 181 DFVVVDRPSSYNAILGR 197


>gb|ERM96088.1| hypothetical protein AMTR_s04653p00000520, partial [Amborella
           trichopoda]
          Length = 563

 Score = 64.7 bits (156), Expect(2) = 5e-09
 Identities = 37/98 (37%), Positives = 56/98 (57%)
 Frame = +1

Query: 166 IIISEEDA*YVHFPHSDALVIEGVMENYKIRRILVDDSSSVHLTTLEVFKALKLDVTKLK 345
           I+  E DA +VH PHSDALVI   +    + RILVD+ SSV+L   + FK + L    L+
Sbjct: 257 IVFMESDARWVHHPHSDALVIVANIGGDNVHRILVDNGSSVNLLNFQAFKQMGLQEKDLR 316

Query: 346 PVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTRAKTLS 459
           P+   + G  G  ++ +  I++ I LG    T AK+++
Sbjct: 317 PMTSSIYGFTGDVIAIKGMIKLPITLGTAPIT-AKSMA 353



 Score = 21.6 bits (44), Expect(2) = 5e-09
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 453 AEFVVIDIPFPYNAILNR 506
           A+F VID    YNA++ R
Sbjct: 353 ADFAVIDQYSAYNAVIGR 370


>gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Japonica Group]
           gi|31431922|gb|AAP53628.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 1292

 Score = 59.3 bits (142), Expect(2) = 1e-08
 Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
 Frame = +1

Query: 88  YSTRKRHAREIYSI*A--EILAESLYRPIIISEEDA*YVHFPHSDALVIEGVMENYKIRR 261
           +  +K   R ++SI +  E   + L + I    EDA  V FPH D LVI   +  +++RR
Sbjct: 317 HKKKKMQTRMVHSITSAGEGAPQYLNQLISFGPEDAEGVIFPHQDPLVISAEIAGFEVRR 376

Query: 262 ILVDDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHT 441
           ILVD  SS  +   E +  + L    L P  + L G  G  V       ++I  G GE+ 
Sbjct: 377 ILVDGGSSADVIFAEAYAKMGLPTQALTPAPVSLRGFGGEAVQVLGQTLLLIAFGSGENR 436

Query: 442 RAKTL 456
           R + +
Sbjct: 437 REEQI 441



 Score = 25.4 bits (54), Expect(2) = 1e-08
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 459 FVVIDIPFPYNAILNR 506
           F V+DIP+ YNAI  R
Sbjct: 443 FDVVDIPYNYNAIFGR 458


>gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1291

 Score = 58.9 bits (141), Expect(2) = 2e-08
 Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
 Frame = +1

Query: 97  RKRHAREIYSI*A--EILAESLYRPIIISEEDA*YVHFPHSDALVIEGVMENYKIRRILV 270
           +K   R ++SI +  E   + L + I    EDA  V FPH D LVI   +  +++RRILV
Sbjct: 387 KKMQTRMVHSITSAGEGAPQYLNQLISFGPEDAEGVIFPHQDPLVISAEIAGFEVRRILV 446

Query: 271 DDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTRAK 450
           D  SS  +   E +  + L    L P  + L G  G  V       ++I  G GE+ R +
Sbjct: 447 DGGSSADVIFAEAYAKMGLPTQALTPAPVSLRGFGGEAVQVLGQTLLLIAFGSGENRREE 506

Query: 451 TL 456
            +
Sbjct: 507 QI 508



 Score = 25.4 bits (54), Expect(2) = 2e-08
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 459 FVVIDIPFPYNAILNR 506
           F V+DIP+ YNAI  R
Sbjct: 510 FDVVDIPYNYNAIFGR 525


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score = 57.8 bits (138), Expect(2) = 2e-08
 Identities = 33/127 (25%), Positives = 62/127 (48%)
 Frame = +1

Query: 76   RRRYYSTRKRHAREIYSI*AEILAESLYRPIIISEEDA*YVHFPHSDALVIEGVMENYKI 255
            +R+ Y  +  H   IY     + ++++   I    EDA  + FPH D LV+   +   ++
Sbjct: 710  QRKAYVRQVNHVGTIYQSKPPVYSKTV---ISFGPEDAEGILFPHQDPLVVSVEIAQCEV 766

Query: 256  RRILVDDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGE 435
            +R+L+D  SS  +   + FK +++   +L    +PL G  G+ V A   I + +  G G 
Sbjct: 767  QRVLIDGGSSADVLFYDAFKKMQIPEDRLTNAGVPLQGFGGQQVHAIGKISLQVVFGKGT 826

Query: 436  HTRAKTL 456
            + R + +
Sbjct: 827  NVRKEEI 833



 Score = 26.2 bits (56), Expect(2) = 2e-08
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 459 FVVIDIPFPYNAILNR 506
           F V+D+P+ YNAIL R
Sbjct: 835 FDVVDMPYQYNAILGR 850


>gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 2035

 Score = 58.2 bits (139), Expect(2) = 3e-08
 Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
 Frame = +1

Query: 97   RKRHAREIYSI*A--EILAESLYRPIIISEEDA*YVHFPHSDALVIEGVMENYKIRRILV 270
            +K   R ++SI +  E   + L + I    EDA  V FPH D LVI   +  +++RRILV
Sbjct: 824  KKMQIRMVHSITSAGEGAPQYLNQLISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILV 883

Query: 271  DDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTRAK 450
            D  SS  +   E +  + L    L P    L G  G  V       ++I  G GE+ R +
Sbjct: 884  DGGSSADVIFAEAYATMGLPTQSLTPAPTSLHGFGGEAVQVLGQALLLIAFGSGENRREE 943

Query: 451  TL 456
             +
Sbjct: 944  QI 945



 Score = 25.4 bits (54), Expect(2) = 3e-08
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 459 FVVIDIPFPYNAILNR 506
           F V+DIP+ YNAI  R
Sbjct: 947 FDVVDIPYNYNAIFGR 962


>gb|AAP53721.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1260

 Score = 58.2 bits (139), Expect(2) = 3e-08
 Identities = 33/97 (34%), Positives = 47/97 (48%)
 Frame = +1

Query: 154 LYRPIIISEEDA*YVHFPHSDALVIEGVMENYKIRRILVDDSSSVHLTTLEVFKALKLDV 333
           L + I    EDA  V FPH D LVI   +  +++RRILVD  SS  +   E +  + L  
Sbjct: 384 LNQQISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPT 443

Query: 334 TKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTR 444
             L P    L G  G+ V      ++++  G GE+ R
Sbjct: 444 LALTPAPASLRGFGGKAVQVLGQAQLLVAFGTGENRR 480



 Score = 25.4 bits (54), Expect(2) = 3e-08
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 459 FVVIDIPFPYNAILNR 506
           F V+DIP+ YNAI  R
Sbjct: 486 FDVVDIPYNYNAIFGR 501


>gb|ABF97503.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1172

 Score = 57.8 bits (138), Expect(2) = 4e-08
 Identities = 31/89 (34%), Positives = 44/89 (49%)
 Frame = +1

Query: 178 EEDA*YVHFPHSDALVIEGVMENYKIRRILVDDSSSVHLTTLEVFKALKLDVTKLKPVRI 357
           +EDA  V FPH D LVI   +  +++RRILVD  SS  +   E +  + L    L P   
Sbjct: 361 QEDAEGVTFPHQDPLVISAEIAGFEVRRILVDGGSSTDVIFAEAYAKMGLTTQALTPAPT 420

Query: 358 PLVGLAGR*VSAEASIEIVIKLGDGEHTR 444
            L G  G  V      ++++  G GE+ R
Sbjct: 421 SLRGFGGEAVQVLGQAQLIVAFGTGENRR 449



 Score = 25.4 bits (54), Expect(2) = 4e-08
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 459 FVVIDIPFPYNAILNR 506
           F V+DIP+ YNAI  R
Sbjct: 455 FDVVDIPYNYNAIFGR 470


>gb|AAT81681.1| putative retrotransposon protein [Oryza sativa Japonica Group]
          Length = 1168

 Score = 57.8 bits (138), Expect(2) = 4e-08
 Identities = 31/89 (34%), Positives = 44/89 (49%)
 Frame = +1

Query: 178 EEDA*YVHFPHSDALVIEGVMENYKIRRILVDDSSSVHLTTLEVFKALKLDVTKLKPVRI 357
           +EDA  V FPH D LVI   +  +++RRILVD  SS  +   E +  + L    L P   
Sbjct: 357 QEDAEGVTFPHQDPLVISAEIAGFEVRRILVDGGSSTDVIFAEAYAKMGLTTQALTPAPT 416

Query: 358 PLVGLAGR*VSAEASIEIVIKLGDGEHTR 444
            L G  G  V      ++++  G GE+ R
Sbjct: 417 SLRGFGGEAVQVLGQAQLIVAFGTGENRR 445



 Score = 25.4 bits (54), Expect(2) = 4e-08
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 459 FVVIDIPFPYNAILNR 506
           F V+DIP+ YNAI  R
Sbjct: 451 FDVVDIPYNYNAIFGR 466


>gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 504

 Score = 57.0 bits (136), Expect(2) = 4e-08
 Identities = 32/93 (34%), Positives = 48/93 (51%)
 Frame = +1

Query: 166 IIISEEDA*YVHFPHSDALVIEGVMENYKIRRILVDDSSSVHLTTLEVFKALKLDVTKLK 345
           I    EDA  + FPH D LVI   +   +++R+LVD  SS  +   + FK +++   +L 
Sbjct: 88  ISFGPEDAEGILFPHQDPLVISVEITQCEVQRVLVDGGSSADVLFYDAFKKMQIPEDRLT 147

Query: 346 PVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTR 444
              IPL G  G+ V A   I + +  G GE+ R
Sbjct: 148 HAGIPLQGFGGQQVHAIGKISLQVVFGGGENKR 180



 Score = 26.2 bits (56), Expect(2) = 4e-08
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 459 FVVIDIPFPYNAILNR 506
           F V+D+P+ YNAIL R
Sbjct: 186 FDVVDMPYQYNAILGR 201


>gb|AAO23086.1| putative gag-pol precursor [Oryza sativa Japonica Group]
          Length = 971

 Score = 55.8 bits (133), Expect(2) = 5e-08
 Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
 Frame = +1

Query: 97   RKRHAREIYSI*AEILAESLYRPIIIS--EEDA*YVHFPHSDALVIEGVMENYKIRRILV 270
            +K H R ++SI +       Y   +IS   EDA  V FPH D LVI   +  +++ RILV
Sbjct: 690  KKMHIRAVHSITSAGKRAPQYVNQLISFGPEDAEGVMFPHQDPLVISAEIAGFEVWRILV 749

Query: 271  DDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTR 444
            D  SS  +  +E +  + L    L P    + G  G  V       ++I  G GE+ R
Sbjct: 750  DGGSSADVIFVEAYAKMGLPTQALTPAPASIRGFGGEAVQVLGQALLLIAFGSGENRR 807



 Score = 26.9 bits (58), Expect(2) = 5e-08
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +3

Query: 459 FVVIDIPFPYNAILNR 506
           F V+DIP+ YNAIL R
Sbjct: 813 FDVVDIPYNYNAILGR 828


>ref|NP_001050456.1| Os03g0439900 [Oryza sativa Japonica Group]
           gi|113548927|dbj|BAF12370.1| Os03g0439900, partial
           [Oryza sativa Japonica Group]
          Length = 420

 Score = 55.8 bits (133), Expect(2) = 5e-08
 Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
 Frame = +1

Query: 97  RKRHAREIYSI*AEILAESLYRPIIIS--EEDA*YVHFPHSDALVIEGVMENYKIRRILV 270
           +K H R ++SI +       Y   +IS   EDA  V FPH D LVI   +  +++ RILV
Sbjct: 139 KKMHIRAVHSITSAGKRAPQYVNQLISFGPEDAEGVMFPHQDPLVISAEIAGFEVWRILV 198

Query: 271 DDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTR 444
           D  SS  +  +E +  + L    L P    + G  G  V       ++I  G GE+ R
Sbjct: 199 DGGSSADVIFVEAYAKMGLPTQALTPAPASIRGFGGEAVQVLGQALLLIAFGSGENRR 256



 Score = 26.9 bits (58), Expect(2) = 5e-08
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +3

Query: 459 FVVIDIPFPYNAILNR 506
           F V+DIP+ YNAIL R
Sbjct: 262 FDVVDIPYNYNAILGR 277


>gb|ABF96839.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 406

 Score = 55.8 bits (133), Expect(2) = 5e-08
 Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
 Frame = +1

Query: 97  RKRHAREIYSI*AEILAESLYRPIIIS--EEDA*YVHFPHSDALVIEGVMENYKIRRILV 270
           +K H R ++SI +       Y   +IS   EDA  V FPH D LVI   +  +++ RILV
Sbjct: 125 KKMHIRAVHSITSAGKRAPQYVNQLISFGPEDAEGVMFPHQDPLVISAEIAGFEVWRILV 184

Query: 271 DDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTR 444
           D  SS  +  +E +  + L    L P    + G  G  V       ++I  G GE+ R
Sbjct: 185 DGGSSADVIFVEAYAKMGLPTQALTPAPASIRGFGGEAVQVLGQALLLIAFGSGENRR 242



 Score = 26.9 bits (58), Expect(2) = 5e-08
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +3

Query: 459 FVVIDIPFPYNAILNR 506
           F V+DIP+ YNAIL R
Sbjct: 248 FDVVDIPYNYNAILGR 263


>ref|XP_002332728.1| predicted protein [Populus trichocarpa] gi|550336505|gb|ERP59548.1|
           hypothetical protein POPTR_0006s17660g [Populus
           trichocarpa]
          Length = 150

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 36/117 (30%), Positives = 61/117 (52%)
 Frame = +1

Query: 151 SLYRPIIISEEDA*YVHFPHSDALVIEGVMENYKIRRILVDDSSSVHLTTLEVFKALKLD 330
           S + PI  +  D   + +PH DALVI  VME +++ + LVDD S +++ + E    + +D
Sbjct: 24  SWHEPITFTPADGQGIKYPHEDALVISTVMEGHRVHKTLVDDDSLMNILSAEAMTKIGMD 83

Query: 331 VTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTRAKTLSL***IFHSHTTPSS 501
             ++  V  PL+G+ G  V  + +  +++ +G          +L   I  SHTTP S
Sbjct: 84  AFRMTIVPTPLIGIEGSAVLMKGAEGLIVTMGTAPCCVTLQQTLWLLIPISHTTPLS 140


>gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1767

 Score = 57.0 bits (136), Expect(2) = 6e-08
 Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
 Frame = +1

Query: 97   RKRHAREIYSI*A--EILAESLYRPIIISEEDA*YVHFPHSDALVIEGVMENYKIRRILV 270
            RK   R ++SI +  E   + + + I    EDA  V FPH D LVI   +  +++RRILV
Sbjct: 658  RKMQIRMVHSITSAGEGAPQYVNQLISFGPEDAEGVLFPHQDPLVISAEIAGFEVRRILV 717

Query: 271  DDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTRAK 450
            D  SS  +   E +  + L    L P    L G  G  V       ++I  G GE+ R +
Sbjct: 718  DGGSSADVIFAEAYAKMGLPTQTLAPAPTSLRGFGGEAVQVLGQALLLIAFGSGENRREE 777

Query: 451  TL 456
             +
Sbjct: 778  QI 779



 Score = 25.4 bits (54), Expect(2) = 6e-08
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 459 FVVIDIPFPYNAILNR 506
           F V+DIP+ YNAI  R
Sbjct: 781 FDVVDIPYNYNAIFGR 796


>gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|46981311|gb|AAT07629.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1459

 Score = 56.6 bits (135), Expect(2) = 7e-08
 Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
 Frame = +1

Query: 97  RKRHAREIYSI*AEILA-ESLYRPIIIS--EEDA*YVHFPHSDALVIEGVMENYKIRRIL 267
           RK + R+I+ +     +    Y   +IS   EDA  + FPH D LVI   +   +++R+L
Sbjct: 228 RKAYVRQIHHVGTSYQSVPPAYSNTVISFGPEDAEGILFPHQDPLVISVEIAQCEVQRVL 287

Query: 268 VDDSSSVHLTTLEVFKALKLDVTKLKPVRIPLVGLAGR*VSAEASIEIVIKLGDGEHTR 444
           VD  SS  +   + FK +++   +L    IPL G  G  V     I + +  G GE+ R
Sbjct: 288 VDGGSSADVLFYDAFKKMQIPEDRLTHAGIPLQGFGGHQVHTIGKISLQVVFGGGENKR 346



 Score = 25.8 bits (55), Expect(2) = 7e-08
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 459 FVVIDIPFPYNAILNR 506
           F V+D+P+ YNA+L R
Sbjct: 352 FDVVDMPYQYNAVLGR 367


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