BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00014110
         (706 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520330.1| replication factor C / DNA polymerase III ga...   397   e-108
ref|XP_002307456.1| predicted protein [Populus trichocarpa] gi|2...   389   e-106
ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is...   389   e-106
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]   389   e-106
gb|ESR47496.1| hypothetical protein CICLE_v10001485mg [Citrus cl...   386   e-105
gb|ESR47495.1| hypothetical protein CICLE_v10001485mg [Citrus cl...   386   e-105
ref|XP_004502518.1| PREDICTED: replication factor C subunit 4-li...   386   e-105
gb|AFK40832.1| unknown [Lotus japonicus]                              385   e-105
ref|XP_003602047.1| Replication factor C subunit [Medicago trunc...   384   e-104
gb|EOY16376.1| ATPase family associated with various cellular ac...   383   e-104
ref|XP_004290901.1| PREDICTED: replication factor C subunit 4-li...   381   e-103
ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-li...   380   e-103
ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-li...   380   e-103
ref|NP_001185061.1| protein embryo defective 1968 [Arabidopsis t...   377   e-102
ref|NP_564148.1| protein embryo defective 1968 [Arabidopsis thal...   377   e-102
ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [S...   377   e-102
ref|XP_004142636.1| PREDICTED: replication factor C subunit 4-li...   376   e-102
ref|XP_002441912.1| hypothetical protein SORBIDRAFT_08g004780 [S...   375   e-102
gb|ESQ34629.1| hypothetical protein EUTSA_v10008129mg [Eutrema s...   375   e-102
gb|EMT17871.1| Replication factor C subunit 4 [Aegilops tauschii]     374   e-101

>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223540549|gb|EEF42116.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 342

 Score =  397 bits (1019), Expect = e-108
 Identities = 199/235 (84%), Positives = 215/235 (91%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+ALAIA QLFGPELYKSRV+ELNASDDRGI
Sbjct: 28  EVVRVLTNTLETSNCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIK+F              YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT
Sbjct: 88  NVVRTKIKNFAAVAVGSGQRAGG-YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 146

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFFLCNYISRIIEPLASRCAKFRFKPLSE+IMS R+L+IC+EEGLN+DAEALSTLS +S
Sbjct: 147 RFFFLCNYISRIIEPLASRCAKFRFKPLSEEIMSSRVLHICREEGLNLDAEALSTLSYVS 206

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQGAARL+GSTISSKDLISVSGVIP+E +GA YAAC+SGDFD+AN
Sbjct: 207 QGDLRRAITYLQGAARLYGSTISSKDLISVSGVIPQEAVGALYAACRSGDFDMAN 261


>ref|XP_002307456.1| predicted protein [Populus trichocarpa] gi|222856905|gb|EEE94452.1|
           replication factor C 37 kDa family protein [Populus
           trichocarpa]
          Length = 342

 Score =  389 bits (999), Expect = e-106
 Identities = 196/235 (83%), Positives = 210/235 (89%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+ALAIA QL+GPELYKSRV+ELNASDDRGI
Sbjct: 28  EVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLYGPELYKSRVLELNASDDRGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIKDF              YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT
Sbjct: 88  NVVRTKIKDFAAVAVGSGQRQGV-YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 146

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPLASRCAKFRFKPL E+IMS+RIL+IC EEGL +D EALSTLSS+S
Sbjct: 147 RFFFICNYISRIIEPLASRCAKFRFKPLPEEIMSNRILHICNEEGLTLDTEALSTLSSVS 206

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQGAARLFGS+ISSKDLISVSG IP+E   A YAACK+GDFDLAN
Sbjct: 207 QGDLRRAITYLQGAARLFGSSISSKDLISVSGAIPREVTEAIYAACKNGDFDLAN 261


>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis
           vinifera] gi|302141781|emb|CBI18984.3| unnamed protein
           product [Vitis vinifera]
          Length = 341

 Score =  389 bits (999), Expect = e-106
 Identities = 198/235 (84%), Positives = 211/235 (89%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+ALAIA QLFGPELYKSRV+ELNASDDRGI
Sbjct: 28  EVVRVLTNTLETTNCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIKDF              YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT
Sbjct: 88  NVVRTKIKDFAAVAVGSGHRQGG-YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 146

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPLASRCAKFRFKPLSE+IMS RIL+ICKEE LN+D+EALSTLSSIS
Sbjct: 147 RFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSRILHICKEEELNLDSEALSTLSSIS 206

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQGAARLFGS ISSKDLISVSGV+P+  + A +AACKSGDFD AN
Sbjct: 207 QGDLRRAITYLQGAARLFGSIISSKDLISVSGVVPQHVVQALFAACKSGDFDSAN 261


>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
          Length = 341

 Score =  389 bits (999), Expect = e-106
 Identities = 199/235 (84%), Positives = 212/235 (90%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+ALAIA QLFGPELYKSRV+ELNASDDRGI
Sbjct: 28  EVVRVLTNTLETTNCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIKDF              YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT
Sbjct: 88  NVVRTKIKDFAXVAVGSGHRQGG-YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 146

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPLASRCAKFRFKPLSE+IMS RIL+ICKEE LN+D+EALSTLSSIS
Sbjct: 147 RFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSRILHICKEEELNLDSEALSTLSSIS 206

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQGAARLFGS ISSKDLISVSGV+P+  + A +AACKSGDFD AN
Sbjct: 207 QGDLRRAITYLQGAARLFGSIISSKDLISVSGVVPQHVVQALFAACKSGDFDSAN 261


>gb|ESR47496.1| hypothetical protein CICLE_v10001485mg [Citrus clementina]
          Length = 382

 Score =  386 bits (991), Expect = e-105
 Identities = 194/235 (82%), Positives = 209/235 (88%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+ALAIA QLFGPELYKSRV+ELNASDDRGI
Sbjct: 68  EVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 127

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIK F              YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT
Sbjct: 128 NVVRTKIKTFAAVAVGSGQRRGG-YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 186

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPLASRCAKFRFKPLSE++MS R+L+IC EEGLN+DAEALSTLSSIS
Sbjct: 187 RFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSIS 246

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
            GDLRRAITYLQGAARLFGS+I+SKDLISVSGVIP E +   +A C+SGDFDLAN
Sbjct: 247 HGDLRRAITYLQGAARLFGSSITSKDLISVSGVIPPEVVEGLFAVCRSGDFDLAN 301


>gb|ESR47495.1| hypothetical protein CICLE_v10001485mg [Citrus clementina]
          Length = 337

 Score =  386 bits (991), Expect = e-105
 Identities = 194/235 (82%), Positives = 209/235 (88%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+ALAIA QLFGPELYKSRV+ELNASDDRGI
Sbjct: 68  EVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 127

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIK F              YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT
Sbjct: 128 NVVRTKIKTFAAVAVGSGQRRGG-YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 186

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPLASRCAKFRFKPLSE++MS R+L+IC EEGLN+DAEALSTLSSIS
Sbjct: 187 RFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSIS 246

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
            GDLRRAITYLQGAARLFGS+I+SKDLISVSGVIP E +   +A C+SGDFDLAN
Sbjct: 247 HGDLRRAITYLQGAARLFGSSITSKDLISVSGVIPPEVVEGLFAVCRSGDFDLAN 301


>ref|XP_004502518.1| PREDICTED: replication factor C subunit 4-like [Cicer arietinum]
          Length = 341

 Score =  386 bits (991), Expect = e-105
 Identities = 195/235 (82%), Positives = 208/235 (88%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EV+RVLTNT+ETG CPHMLFYGPPGTGKTT+ALAIA QLFGPELYKSRV+ELNASDDRGI
Sbjct: 28  EVIRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIKDF              YPCPPYKII+LDEADSMTEDAQNALRRTMETYSKVT
Sbjct: 88  NVVRTKIKDFAAVAVGTNQRKNG-YPCPPYKIIVLDEADSMTEDAQNALRRTMETYSKVT 146

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPLASRCAKFRFKPL+E+IMS RILYICKEEGL +DAE LS LSSIS
Sbjct: 147 RFFFICNYISRIIEPLASRCAKFRFKPLTEEIMSSRILYICKEEGLYLDAEGLSALSSIS 206

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQ AARLFGS+ISSKDLISVSGV+P E + A   ACKSG+FDLAN
Sbjct: 207 QGDLRRAITYLQSAARLFGSSISSKDLISVSGVVPAEVVEALLKACKSGNFDLAN 261


>gb|AFK40832.1| unknown [Lotus japonicus]
          Length = 342

 Score =  385 bits (989), Expect = e-105
 Identities = 195/235 (82%), Positives = 208/235 (88%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT+ETG CPHMLFYGPPGTGKTT+ALAIA QLFGPELYKSRV+ELNASDDRGI
Sbjct: 28  EVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIKDF              YPCPPYKII+LDEADSMTEDAQNALRRTMETYSKVT
Sbjct: 88  NVVRTKIKDFAAVAVGTNPKKGG-YPCPPYKIIVLDEADSMTEDAQNALRRTMETYSKVT 146

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPLASRCAKFRFKPLSE+IMS RILYIC EEGL++DAE LSTLSSIS
Sbjct: 147 RFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSRILYICNEEGLHLDAEGLSTLSSIS 206

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQ +ARLFGS ISSKDLISVSGV+P+  + A   ACKSG+FDLAN
Sbjct: 207 QGDLRRAITYLQSSARLFGSHISSKDLISVSGVVPENVVEAILKACKSGNFDLAN 261


>ref|XP_003602047.1| Replication factor C subunit [Medicago truncatula]
           gi|357520353|ref|XP_003630465.1| Replication factor C
           subunit [Medicago truncatula]
           gi|217073528|gb|ACJ85124.1| unknown [Medicago
           truncatula] gi|355491095|gb|AES72298.1| Replication
           factor C subunit [Medicago truncatula]
           gi|355524487|gb|AET04941.1| Replication factor C subunit
           [Medicago truncatula] gi|388492316|gb|AFK34224.1|
           unknown [Medicago truncatula]
          Length = 339

 Score =  384 bits (985), Expect = e-104
 Identities = 192/235 (81%), Positives = 209/235 (88%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT+ETG CPHMLFYGPPGTGKTT+ALAIA QLFGPELYKSRV+ELNASDDRGI
Sbjct: 28  EVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIKDF              YPCPPYKII+LDEADSMTEDAQNALRRTMETYSKVT
Sbjct: 88  NVVRTKIKDFAAVAVGTNKPKNG-YPCPPYKIIVLDEADSMTEDAQNALRRTMETYSKVT 146

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPLASRCAKFRFKPL+E+IMS RI+YICKEEG+ +DAE LSTLS+IS
Sbjct: 147 RFFFICNYISRIIEPLASRCAKFRFKPLTEEIMSSRIVYICKEEGIYLDAEGLSTLSNIS 206

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQ AARLFGS+ISSKDLISVSG++P E + A   AC+SG+FDLAN
Sbjct: 207 QGDLRRAITYLQSAARLFGSSISSKDLISVSGIVPAEVVEALLKACRSGNFDLAN 261


>gb|EOY16376.1| ATPase family associated with various cellular activities (AAA)
           [Theobroma cacao]
          Length = 345

 Score =  383 bits (984), Expect = e-104
 Identities = 196/238 (82%), Positives = 214/238 (89%), Gaps = 3/238 (1%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+ALAIA QLFGPELYKSRV+ELNASD+RGI
Sbjct: 28  EVVRVLTNTLETSNCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDERGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQ---NALRRTMETYS 352
           NVVRTKIKDF              YPCPP+KIIILDEADSMTEDAQ   NALRRTMETYS
Sbjct: 88  NVVRTKIKDFAAVAVGSGQRQGG-YPCPPFKIIILDEADSMTEDAQACLNALRRTMETYS 146

Query: 353 KVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLS 532
           KVTRFFF+CNYISRIIEPLASRCAKFRFK LSE+IMS+R+L+IC EEGL++D+EALSTLS
Sbjct: 147 KVTRFFFICNYISRIIEPLASRCAKFRFKALSEEIMSNRVLHICNEEGLHLDSEALSTLS 206

Query: 533 SISQGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           SISQGDLRRAITYLQGAARLFGSTISSKDL+SVSGVIP+E + A YAACKSG+FDLAN
Sbjct: 207 SISQGDLRRAITYLQGAARLFGSTISSKDLLSVSGVIPQEVVEALYAACKSGNFDLAN 264


>ref|XP_004290901.1| PREDICTED: replication factor C subunit 4-like [Fragaria vesca
           subsp. vesca]
          Length = 339

 Score =  381 bits (979), Expect = e-103
 Identities = 191/235 (81%), Positives = 213/235 (90%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+ALAIARQLFGPELYKSRV+ELNASDDRGI
Sbjct: 28  EVVRVLTNTLETSNCPHMLFYGPPGTGKTTTALAIARQLFGPELYKSRVLELNASDDRGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           N+VRTKIKDF              YPCPP+KIIILDEADSMTEDAQNALRRTMETYS+ +
Sbjct: 88  NIVRTKIKDFAAVAVKSCKGQGG-YPCPPFKIIILDEADSMTEDAQNALRRTMETYSRGS 146

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM  R+L+IC+EEGL+++ EALSTLSSIS
Sbjct: 147 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMITRVLHICQEEGLDLEPEALSTLSSIS 206

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQ AARLFGS+I+SKDLISVSGVIP+E + +F+AAC+SG+FDLAN
Sbjct: 207 QGDLRRAITYLQSAARLFGSSITSKDLISVSGVIPQEVVDSFFAACRSGNFDLAN 261


>ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-like [Solanum
           lycopersicum]
          Length = 339

 Score =  380 bits (977), Expect = e-103
 Identities = 191/235 (81%), Positives = 211/235 (89%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+ALAIA QLFGPELYKSRV+ELNASDDRGI
Sbjct: 28  EVVRVLTNTLETSNCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIK+F              YPCPP+KIIILDEADSMT+DAQNALRRTMETYSKVT
Sbjct: 88  NVVRTKIKNFAAVAVGSNRQSG--YPCPPFKIIILDEADSMTQDAQNALRRTMETYSKVT 145

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPLASRCAKFRFKPL E+IM  RIL+ICKEEGLN+D+EALSTLSSIS
Sbjct: 146 RFFFICNYISRIIEPLASRCAKFRFKPLPEEIMGSRILHICKEEGLNLDSEALSTLSSIS 205

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQ AARLFGS+IS+K+LISVSGVIP E + A ++AC+SG+FDLAN
Sbjct: 206 QGDLRRAITYLQSAARLFGSSISAKELISVSGVIPNEVVQAIFSACRSGNFDLAN 260


>ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
          Length = 339

 Score =  380 bits (976), Expect = e-103
 Identities = 190/235 (80%), Positives = 211/235 (89%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+ALAIA QLFGPELYKSRV+ELNASDDRGI
Sbjct: 28  EVVRVLTNTLETSNCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIK+F              YPCPP+KIIILDEADSMT+DAQNALRRTMETYSKVT
Sbjct: 88  NVVRTKIKNFAAVAVGSNRQSG--YPCPPFKIIILDEADSMTQDAQNALRRTMETYSKVT 145

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPLASRCAKFRFKPL E++M  RIL+ICKEEGLN+D+EALSTLSSIS
Sbjct: 146 RFFFICNYISRIIEPLASRCAKFRFKPLPEEVMGSRILHICKEEGLNLDSEALSTLSSIS 205

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQ AARLFGS+IS+K+LISVSGVIP E + A ++AC+SG+FDLAN
Sbjct: 206 QGDLRRAITYLQSAARLFGSSISAKELISVSGVIPNEVVQAMFSACRSGNFDLAN 260


>ref|NP_001185061.1| protein embryo defective 1968 [Arabidopsis thaliana]
           gi|332192021|gb|AEE30142.1| protein embryo defective
           1968 [Arabidopsis thaliana]
          Length = 341

 Score =  377 bits (969), Expect = e-102
 Identities = 188/235 (80%), Positives = 207/235 (88%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT++T DCPHMLFYGPPGTGKTT+ALAIA QLFGPELYKSRV+ELNASDDRGI
Sbjct: 28  EVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIKDF              YPCP +KIIILDEADSMTEDAQNALRRTMETYSKVT
Sbjct: 88  NVVRTKIKDFAAVAVGSNHRQSG-YPCPSFKIIILDEADSMTEDAQNALRRTMETYSKVT 146

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPLASRCAKFRFKPLSE++MS+RIL+IC EEGL++D EALSTLSSIS
Sbjct: 147 RFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSIS 206

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQ A RLFGSTI+S DL++VSGV+P E +   + ACKSGDFD+AN
Sbjct: 207 QGDLRRAITYLQSATRLFGSTITSTDLLNVSGVVPLEVVNKLFTACKSGDFDIAN 261


>ref|NP_564148.1| protein embryo defective 1968 [Arabidopsis thaliana]
           gi|75163839|sp|Q93ZX1.1|RFC4_ARATH RecName:
           Full=Replication factor C subunit 4; Short=AtRFC4;
           AltName: Full=Activator 1 subunit 4; AltName:
           Full=Protein EMBRYO DEFECTIVE 1968
           gi|15810343|gb|AAL07059.1| putative replication factor
           [Arabidopsis thaliana] gi|17065122|gb|AAL32715.1|
           Similar replication factor C, 37-kDa subunit
           [Arabidopsis thaliana] gi|21536935|gb|AAM61276.1|
           putative replication factor [Arabidopsis thaliana]
           gi|34098857|gb|AAQ56811.1| At1g21690 [Arabidopsis
           thaliana] gi|332192018|gb|AEE30139.1| protein embryo
           defective 1968 [Arabidopsis thaliana]
          Length = 339

 Score =  377 bits (969), Expect = e-102
 Identities = 188/235 (80%), Positives = 207/235 (88%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT++T DCPHMLFYGPPGTGKTT+ALAIA QLFGPELYKSRV+ELNASDDRGI
Sbjct: 28  EVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIKDF              YPCP +KIIILDEADSMTEDAQNALRRTMETYSKVT
Sbjct: 88  NVVRTKIKDFAAVAVGSNHRQSG-YPCPSFKIIILDEADSMTEDAQNALRRTMETYSKVT 146

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPLASRCAKFRFKPLSE++MS+RIL+IC EEGL++D EALSTLSSIS
Sbjct: 147 RFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSIS 206

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQ A RLFGSTI+S DL++VSGV+P E +   + ACKSGDFD+AN
Sbjct: 207 QGDLRRAITYLQSATRLFGSTITSTDLLNVSGVVPLEVVNKLFTACKSGDFDIAN 261


>ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [Sorghum bicolor]
           gi|241922268|gb|EER95412.1| hypothetical protein
           SORBIDRAFT_01g045530 [Sorghum bicolor]
          Length = 339

 Score =  377 bits (968), Expect = e-102
 Identities = 188/235 (80%), Positives = 210/235 (89%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EV+RVLTNT++T D PHMLFYGPPGTGKTT+ALAIA QL+GPELYKSRV+ELNASDDRGI
Sbjct: 28  EVIRVLTNTLQTADLPHMLFYGPPGTGKTTTALAIAYQLYGPELYKSRVLELNASDDRGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIKDF              YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT
Sbjct: 88  NVVRTKIKDFAAVAVGTARKAG--YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 145

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPLASRCAKFRFKPLSE++MS RI++IC EEGLN+DA+ALSTLS+IS
Sbjct: 146 RFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSSRIMHICNEEGLNLDAQALSTLSAIS 205

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQ AARLFGS++SS DLISVSGVIP++ + +  AACKSG+FD+AN
Sbjct: 206 QGDLRRAITYLQSAARLFGSSLSSSDLISVSGVIPEDVVKSLLAACKSGEFDVAN 260


>ref|XP_004142636.1| PREDICTED: replication factor C subunit 4-like [Cucumis sativus]
          Length = 336

 Score =  376 bits (965), Expect = e-102
 Identities = 189/235 (80%), Positives = 209/235 (88%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+ALAIA QLFGPELYKSRV+ELNASDDRGI
Sbjct: 28  EVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIKDF              YPCPP+KIIILDEADSMTEDAQNALRRTMET+SKVT
Sbjct: 88  NVVRTKIKDFAGVAVSSGQRQGG-YPCPPFKIIILDEADSMTEDAQNALRRTMETHSKVT 146

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPLASRCAKFRFKPLSE++MS RIL+I  EEGL++D EALSTLSSIS
Sbjct: 147 RFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHIGNEEGLSLDGEALSTLSSIS 206

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQ AARLFGS+ISSKDL++VSG+IP+E + A + ACKSG+FD AN
Sbjct: 207 QGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPQEVVDALFVACKSGNFDTAN 261


>ref|XP_002441912.1| hypothetical protein SORBIDRAFT_08g004780 [Sorghum bicolor]
           gi|241942605|gb|EES15750.1| hypothetical protein
           SORBIDRAFT_08g004780 [Sorghum bicolor]
          Length = 339

 Score =  375 bits (964), Expect = e-102
 Identities = 187/235 (79%), Positives = 210/235 (89%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EV+RVLTNT++T D PHMLFYGPPGTGKTT+ALAIA QL+GPELYKSRV+ELNASDDRGI
Sbjct: 28  EVIRVLTNTLQTADLPHMLFYGPPGTGKTTTALAIAYQLYGPELYKSRVLELNASDDRGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIKDF              YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT
Sbjct: 88  NVVRTKIKDFAAVAVGTARKAG--YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 145

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPL SRCAKFRFKPLSE++MS+RI++IC EEGLN+DA+ALSTLS+IS
Sbjct: 146 RFFFICNYISRIIEPLVSRCAKFRFKPLSEEVMSNRIMHICNEEGLNLDAQALSTLSAIS 205

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQ AARLFGS+ISS DLISVSGVIP++ + +  AAC+SG+FD+AN
Sbjct: 206 QGDLRRAITYLQSAARLFGSSISSSDLISVSGVIPEDVVKSLLAACRSGEFDVAN 260


>gb|ESQ34629.1| hypothetical protein EUTSA_v10008129mg [Eutrema salsugineum]
          Length = 339

 Score =  375 bits (963), Expect = e-102
 Identities = 188/235 (80%), Positives = 206/235 (87%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+ALAIA QLFGPELYKSRV+ELNASDDRGI
Sbjct: 28  EVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIKDF              YPCP +KIIILDEADSMTEDAQNALRRTMETYSKVT
Sbjct: 88  NVVRTKIKDFAAVAVGSNNRQGG-YPCPSFKIIILDEADSMTEDAQNALRRTMETYSKVT 146

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPLASRCAKFRFKPLSE++M++RIL+IC EEGLN+  EALSTLSSIS
Sbjct: 147 RFFFICNYISRIIEPLASRCAKFRFKPLSEEVMTNRILHICNEEGLNLGGEALSTLSSIS 206

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQ AARLFGSTI+S DL+ VSGV+P E +   + ACKSGDFD+AN
Sbjct: 207 QGDLRRAITYLQSAARLFGSTITSTDLLDVSGVVPLEVVKRLFTACKSGDFDIAN 261


>gb|EMT17871.1| Replication factor C subunit 4 [Aegilops tauschii]
          Length = 339

 Score =  374 bits (961), Expect = e-101
 Identities = 188/235 (80%), Positives = 208/235 (88%)
 Frame = +2

Query: 2   EVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFGPELYKSRVMELNASDDRGI 181
           EVVRVLTNT+ET D PHMLFYGPPGTGKTT+ALAIA QL+GPELYKSRV+ELNASD+RGI
Sbjct: 28  EVVRVLTNTLETADLPHMLFYGPPGTGKTTTALAIAYQLYGPELYKSRVLELNASDERGI 87

Query: 182 NVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 361
           NVVRTKIKDF              YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT
Sbjct: 88  NVVRTKIKDFAAVAVGSARKGG--YPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVT 145

Query: 362 RFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMSDRILYICKEEGLNIDAEALSTLSSIS 541
           RFFF+CNYISRIIEPLASRCAKFRFKPLSED+MS+RIL+IC EEGL +DA+ALSTLS+IS
Sbjct: 146 RFFFICNYISRIIEPLASRCAKFRFKPLSEDVMSNRILHICNEEGLTLDAQALSTLSAIS 205

Query: 542 QGDLRRAITYLQGAARLFGSTISSKDLISVSGVIPKEFLGAFYAACKSGDFDLAN 706
           QGDLRRAITYLQ AARLFGS+IS+ DLISVSG IP++ + +   ACKSG+FD+AN
Sbjct: 206 QGDLRRAITYLQSAARLFGSSISASDLISVSGAIPEDIVKSLLVACKSGEFDVAN 260