BLASTX nr result
ID: Jatropha_contig00014050
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00014050
(563 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520128.1| conserved hypothetical protein [Ricinus comm... 333 2e-89
gb|EOY02047.1| SsDNA-binding transcriptional regulator isoform 3... 187 1e-45
gb|EOY02045.1| SsDNA-binding transcriptional regulator isoform 1... 187 1e-45
ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253... 187 1e-45
ref|XP_004297331.1| PREDICTED: single-stranded DNA-binding prote... 183 3e-44
gb|ADL36850.1| WHY domain class transcription factor [Malus dome... 177 2e-42
gb|EMJ23674.1| hypothetical protein PRUPE_ppa009776mg [Prunus pe... 176 3e-42
gb|EEF01964.2| hypothetical protein POPTR_0010s10260g [Populus t... 174 2e-41
gb|ESR51867.1| hypothetical protein CICLE_v10032427mg [Citrus cl... 172 4e-41
ref|XP_002311601.1| predicted protein [Populus trichocarpa] gi|1... 171 1e-40
ref|NP_001077872.1| single-stranded DNA-binding protein WHY3 [Ar... 168 7e-40
ref|NP_178377.2| single-stranded DNA-binding protein WHY3 [Arabi... 168 7e-40
ref|XP_006303274.1| hypothetical protein CARUB_v10010024mg [Caps... 168 9e-40
ref|XP_002875143.1| ATWHY3/PTAC11 [Arabidopsis lyrata subsp. lyr... 166 3e-39
ref|XP_006357267.1| PREDICTED: DNA-binding protein p24 [Solanum ... 166 4e-39
dbj|BAF02013.1| hypothetical protein [Arabidopsis thaliana] 166 5e-39
ref|XP_006291681.1| hypothetical protein CARUB_v10017841mg [Caps... 164 1e-38
ref|XP_002892804.1| ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyra... 164 2e-38
ref|XP_004238773.1| PREDICTED: single-stranded DNA-bindig protei... 163 2e-38
gb|ESQ33048.1| hypothetical protein EUTSA_v10004763mg [Eutrema s... 163 3e-38
>ref|XP_002520128.1| conserved hypothetical protein [Ricinus communis]
gi|223540620|gb|EEF42183.1| conserved hypothetical
protein [Ricinus communis]
Length = 271
Score = 333 bits (854), Expect = 2e-89
Identities = 169/176 (96%), Positives = 169/176 (96%)
Frame = +3
Query: 36 MLSSPVTSTQNPKLWTPNTFSSLQSFRTTSTTFIHTISAPRRLSTNTNRAVKCRQSEFYD 215
MLSSPVTSTQNPKLWTPNTFSSLQSFRTTSTTFIHTISAPRRLSTNTNRAVKCRQSEFYD
Sbjct: 1 MLSSPVTSTQNPKLWTPNTFSSLQSFRTTSTTFIHTISAPRRLSTNTNRAVKCRQSEFYD 60
Query: 216 XXXXXXXKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIYKGKAALTVEPRAPEFAALDSG 395
KYNPSRPSSNDSSFASQSPAAVPRVYVGHSIYKGKAALTVEPRAPEFAALDSG
Sbjct: 61 QQQQ---KYNPSRPSSNDSSFASQSPAAVPRVYVGHSIYKGKAALTVEPRAPEFAALDSG 117
Query: 396 AFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHDP 563
AFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHDP
Sbjct: 118 AFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHDP 173
>gb|EOY02047.1| SsDNA-binding transcriptional regulator isoform 3 [Theobroma cacao]
Length = 211
Score = 187 bits (476), Expect = 1e-45
Identities = 110/184 (59%), Positives = 127/184 (69%), Gaps = 5/184 (2%)
Frame = +3
Query: 27 QRNMLSSPVTSTQ--NPKLWTPNTFSSLQSFRTTSTTFIHTISA-PRRLSTNTNR-AVKC 194
Q LSSP S Q NP T N SS S ++T T H P L+ ++ ++KC
Sbjct: 3 QLQFLSSPPLSAQSLNPNSNT-NLLSSFSSLKSTQT---HAFKLNPLSLTPKPSKFSLKC 58
Query: 195 RQSEFYDXXXXXXXKYNPSRPSSNDSSFASQSPAAVP-RVYVGHSIYKGKAALTVEPRAP 371
RQSE++D + SN SS AS + +P R YVGHS+YKGKAALTVEPRAP
Sbjct: 59 RQSEYFDQ----------QQRFSNSSSTASPPASGLPPRFYVGHSVYKGKAALTVEPRAP 108
Query: 372 EFAALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEF 551
EF LDSGAFK++REGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIG +ISLGAR+SCEF
Sbjct: 109 EFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGALISLGARESCEF 168
Query: 552 FHDP 563
FHDP
Sbjct: 169 FHDP 172
>gb|EOY02045.1| SsDNA-binding transcriptional regulator isoform 1 [Theobroma cacao]
Length = 270
Score = 187 bits (476), Expect = 1e-45
Identities = 110/184 (59%), Positives = 127/184 (69%), Gaps = 5/184 (2%)
Frame = +3
Query: 27 QRNMLSSPVTSTQ--NPKLWTPNTFSSLQSFRTTSTTFIHTISA-PRRLSTNTNR-AVKC 194
Q LSSP S Q NP T N SS S ++T T H P L+ ++ ++KC
Sbjct: 3 QLQFLSSPPLSAQSLNPNSNT-NLLSSFSSLKSTQT---HAFKLNPLSLTPKPSKFSLKC 58
Query: 195 RQSEFYDXXXXXXXKYNPSRPSSNDSSFASQSPAAVP-RVYVGHSIYKGKAALTVEPRAP 371
RQSE++D + SN SS AS + +P R YVGHS+YKGKAALTVEPRAP
Sbjct: 59 RQSEYFDQ----------QQRFSNSSSTASPPASGLPPRFYVGHSVYKGKAALTVEPRAP 108
Query: 372 EFAALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEF 551
EF LDSGAFK++REGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIG +ISLGAR+SCEF
Sbjct: 109 EFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGALISLGARESCEF 168
Query: 552 FHDP 563
FHDP
Sbjct: 169 FHDP 172
>ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253653 [Vitis vinifera]
gi|296086421|emb|CBI32010.3| unnamed protein product
[Vitis vinifera]
Length = 268
Score = 187 bits (475), Expect = 1e-45
Identities = 107/181 (59%), Positives = 127/181 (70%), Gaps = 4/181 (2%)
Frame = +3
Query: 33 NMLSSPVTSTQNPKLWTPNTFSSLQSFRTTSTTFIHTISAPRRLSTNTN----RAVKCRQ 200
++LSS T QNP+L ++ SSL S S+ T P LST + R+++CRQ
Sbjct: 5 HLLSSSFT-IQNPRLCPNHSLSSLHS----SSPLSFTSRTPLLLSTTRHFRKKRSLQCRQ 59
Query: 201 SEFYDXXXXXXXKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIYKGKAALTVEPRAPEFA 380
S+++ R NDSSF A PRV+VGHSIYKGKAALTVEP+APEF
Sbjct: 60 SDYFQQQNITR------RQPPNDSSFGG---ALQPRVFVGHSIYKGKAALTVEPKAPEFT 110
Query: 381 ALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHD 560
LDSGAFKV++EGFVLLQFAPAAGVRQYDW RKQVFSLSVTEIG++ISLGAR+SCEFFHD
Sbjct: 111 PLDSGAFKVSKEGFVLLQFAPAAGVRQYDWGRKQVFSLSVTEIGSLISLGARESCEFFHD 170
Query: 561 P 563
P
Sbjct: 171 P 171
>ref|XP_004297331.1| PREDICTED: single-stranded DNA-binding protein WHY1,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 270
Score = 183 bits (464), Expect = 3e-44
Identities = 110/180 (61%), Positives = 125/180 (69%), Gaps = 5/180 (2%)
Frame = +3
Query: 39 LSSPVTSTQNPKLWTPNTFSSLQSFRTTSTTFIHTISAPRRLSTNTNR-AVKCRQSEFYD 215
LSSPV + QNP + S + F T S F AP S R A+KCRQSE++D
Sbjct: 8 LSSPV-AVQNPN---HSVSSKARVFSTNSFGF-----APNSTSFRKRRLALKCRQSEYFD 58
Query: 216 XXXXXXXKYNPSRPSSNDSSFASQSPAAVP----RVYVGHSIYKGKAALTVEPRAPEFAA 383
P+ PS+ S A QSPA R YVGHSIYKGKAALTVEP+APEF A
Sbjct: 59 QQRLTA----PNPPSTAAS--APQSPAGASAGPARFYVGHSIYKGKAALTVEPKAPEFTA 112
Query: 384 LDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHDP 563
LDSGAFK++REGFVLLQFAPAAGVR YDWSRKQVFSLSVTEIG+I+SLGA++SCEFFHDP
Sbjct: 113 LDSGAFKMSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSIVSLGAKESCEFFHDP 172
>gb|ADL36850.1| WHY domain class transcription factor [Malus domestica]
Length = 276
Score = 177 bits (448), Expect = 2e-42
Identities = 99/178 (55%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Frame = +3
Query: 33 NMLSSPVTSTQNPKLWTPNTFSSLQSFRTTSTTFIHTIS-APRRLSTNTNRAVKCRQSEF 209
++LSSP T+ Q P P+ F S Q +T AP + + ++KCRQSE+
Sbjct: 5 HLLSSPATA-QKPNQ-NPSQFLSSQLLSRARVFSTNTFGFAPSPILSRKRLSLKCRQSEY 62
Query: 210 YDXXXXXXXKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIYKGKAALTVEPRAPEFAALD 389
+D +P++PS + A + A PR YVGHSIYKGKAALTVEP+APEF LD
Sbjct: 63 FDQQRTSTAA-SPNKPSPAPPTPAGATGMA-PRFYVGHSIYKGKAALTVEPKAPEFTPLD 120
Query: 390 SGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHDP 563
SGAFK++REGFVLLQFAPAAGVR YDWSRKQVFSLSVTEIG+++SLG+++S EFFHDP
Sbjct: 121 SGAFKLSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSLVSLGSKESLEFFHDP 178
>gb|EMJ23674.1| hypothetical protein PRUPE_ppa009776mg [Prunus persica]
Length = 278
Score = 176 bits (447), Expect = 3e-42
Identities = 95/175 (54%), Positives = 116/175 (66%)
Frame = +3
Query: 39 LSSPVTSTQNPKLWTPNTFSSLQSFRTTSTTFIHTISAPRRLSTNTNRAVKCRQSEFYDX 218
LSSP + QNP +S S R + AP S+ ++KCRQSE++D
Sbjct: 7 LSSPAVAAQNPNQNPKQCLASELSSRARVFSTNSFGFAPSLSSSRKRLSLKCRQSEYFDQ 66
Query: 219 XXXXXXKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIYKGKAALTVEPRAPEFAALDSGA 398
P++PS + PR +VGHSIYKGKAALTVEP+APEF ALDSGA
Sbjct: 67 QRASTASA-PNKPSPPAPQTPAGGTGLPPRFFVGHSIYKGKAALTVEPKAPEFTALDSGA 125
Query: 399 FKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHDP 563
FK++REGFVLLQFAPAAGVR YDWSRKQVFSLSVTEIG+++ LG+++S EFFHDP
Sbjct: 126 FKLSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSLVCLGSKESIEFFHDP 180
>gb|EEF01964.2| hypothetical protein POPTR_0010s10260g [Populus trichocarpa]
Length = 271
Score = 174 bits (440), Expect = 2e-41
Identities = 95/179 (53%), Positives = 125/179 (69%)
Frame = +3
Query: 27 QRNMLSSPVTSTQNPKLWTPNTFSSLQSFRTTSTTFIHTISAPRRLSTNTNRAVKCRQSE 206
Q N +S ++TQNP LW P S+ QS + +S +IS + +T + + + +
Sbjct: 3 QLNSVSWLSSTTQNPMLWLPQ--SNSQSSQDSSA--FSSISNSKTSNTKKKKKLSVKY-Q 57
Query: 207 FYDXXXXXXXKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIYKGKAALTVEPRAPEFAAL 386
+YD + SRPSS+ + +SP P+V+VGHSIYKGKAALT+EPRAPEF+ L
Sbjct: 58 YYDHQQKSFT--SSSRPSSSSAPPVGESP---PKVFVGHSIYKGKAALTIEPRAPEFSPL 112
Query: 387 DSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHDP 563
+SGA+K+ +EGFVL QFAPA+ RQYDW+RKQVFSLSVTEIG ++SLGARDSCEFFHDP
Sbjct: 113 ESGAYKLVKEGFVLSQFAPASSARQYDWTRKQVFSLSVTEIGHLVSLGARDSCEFFHDP 171
>gb|ESR51867.1| hypothetical protein CICLE_v10032427mg [Citrus clementina]
Length = 267
Score = 172 bits (437), Expect = 4e-41
Identities = 97/176 (55%), Positives = 120/176 (68%), Gaps = 6/176 (3%)
Frame = +3
Query: 54 TSTQNPKLWTPNTFSSLQ-----SFRTTSTTFIHTISAPRRLSTNTNRAVKCRQSEFYDX 218
+ T NPKL ++ S+ + SF T +T I VKCRQSE+Y+
Sbjct: 10 SQTLNPKLCPFHSLSNSKGNGFGSFSVTESTSIK----------KKKLYVKCRQSEYYEQ 59
Query: 219 XXXXXXKYNPSRPSSNDSSFASQSPAAVP-RVYVGHSIYKGKAALTVEPRAPEFAALDSG 395
K + PS++ + + +P RVYVGHSIYKGKAALTVEPR PEF +LDSG
Sbjct: 60 ------KSFSASPSNSSYAPTDVAVGTLPTRVYVGHSIYKGKAALTVEPRGPEFVSLDSG 113
Query: 396 AFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHDP 563
A K++REGFV+LQFAPAAGVRQYDWSRKQVFSLSVTEIG++++LGAR+SCEFFHDP
Sbjct: 114 AVKLSREGFVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSLVALGARESCEFFHDP 169
>ref|XP_002311601.1| predicted protein [Populus trichocarpa] gi|118485247|gb|ABK94483.1|
unknown [Populus trichocarpa]
gi|222851421|gb|EEE88968.1| hypothetical protein
POPTR_0008s14840g [Populus trichocarpa]
Length = 265
Score = 171 bits (433), Expect = 1e-40
Identities = 99/181 (54%), Positives = 120/181 (66%), Gaps = 2/181 (1%)
Frame = +3
Query: 27 QRNMLSSPVTSTQNPKLWTP--NTFSSLQSFRTTSTTFIHTISAPRRLSTNTNRAVKCRQ 200
Q N +S +S QNPKLW P N+ S +S S T S+ + T VKC
Sbjct: 3 QLNSVSRVSSSPQNPKLWLPQYNSLCSTKSISLNSKT-----SSTEKKKT---LGVKC-- 52
Query: 201 SEFYDXXXXXXXKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIYKGKAALTVEPRAPEFA 380
++YD + S PSS +SP P+V+VGHSIYKGKAALTVEPR+PEF+
Sbjct: 53 -QYYDQQHKTFTTSSRSSPSSAPP--VGESP---PKVFVGHSIYKGKAALTVEPRSPEFS 106
Query: 381 ALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHD 560
LDSGA+K+ +EGFVLLQFAPAA VRQYDW+RKQVFSLSVTEIG ++SL A+ SCEFFHD
Sbjct: 107 PLDSGAYKLVKEGFVLLQFAPAASVRQYDWTRKQVFSLSVTEIGHLVSLDAKGSCEFFHD 166
Query: 561 P 563
P
Sbjct: 167 P 167
>ref|NP_001077872.1| single-stranded DNA-binding protein WHY3 [Arabidopsis thaliana]
gi|330250525|gb|AEC05619.1| single-stranded DNA-binding
protein WHY3 [Arabidopsis thaliana]
Length = 267
Score = 168 bits (426), Expect = 7e-40
Identities = 83/137 (60%), Positives = 101/137 (73%)
Frame = +3
Query: 153 PRRLSTNTNRAVKCRQSEFYDXXXXXXXKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIY 332
P + + VK RQS++++ + DSS + + + PR YVGHSIY
Sbjct: 45 PLKPTARLKLTVKSRQSDYFE------------KQRFGDSSSSQNAEVSSPRFYVGHSIY 92
Query: 333 KGKAALTVEPRAPEFAALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIG 512
KGKAALT+EPRAPEF AL+SGAFK+ +EGF+LLQFAPAAGVRQYDWSRKQVFSLSVTEIG
Sbjct: 93 KGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIG 152
Query: 513 TIISLGARDSCEFFHDP 563
++SLG R+SCEFFHDP
Sbjct: 153 NLVSLGPRESCEFFHDP 169
>ref|NP_178377.2| single-stranded DNA-binding protein WHY3 [Arabidopsis thaliana]
gi|75115367|sp|Q66GR6.1|WHY3_ARATH RecName:
Full=Single-stranded DNA-binding protein WHY3,
chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 11; AltName: Full=Protein
WHIRLY 3; Short=AtWHY3; Flags: Precursor
gi|51536442|gb|AAU05459.1| At2g02740 [Arabidopsis
thaliana] gi|51972072|gb|AAU15140.1| At2g02740
[Arabidopsis thaliana] gi|330250524|gb|AEC05618.1|
single-stranded DNA-binding protein WHY3 [Arabidopsis
thaliana]
Length = 268
Score = 168 bits (426), Expect = 7e-40
Identities = 83/137 (60%), Positives = 101/137 (73%)
Frame = +3
Query: 153 PRRLSTNTNRAVKCRQSEFYDXXXXXXXKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIY 332
P + + VK RQS++++ + DSS + + + PR YVGHSIY
Sbjct: 45 PLKPTARLKLTVKSRQSDYFE------------KQRFGDSSSSQNAEVSSPRFYVGHSIY 92
Query: 333 KGKAALTVEPRAPEFAALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIG 512
KGKAALT+EPRAPEF AL+SGAFK+ +EGF+LLQFAPAAGVRQYDWSRKQVFSLSVTEIG
Sbjct: 93 KGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIG 152
Query: 513 TIISLGARDSCEFFHDP 563
++SLG R+SCEFFHDP
Sbjct: 153 NLVSLGPRESCEFFHDP 169
>ref|XP_006303274.1| hypothetical protein CARUB_v10010024mg [Capsella rubella]
gi|482571985|gb|EOA36172.1| hypothetical protein
CARUB_v10010024mg [Capsella rubella]
Length = 266
Score = 168 bits (425), Expect = 9e-40
Identities = 84/127 (66%), Positives = 102/127 (80%)
Frame = +3
Query: 183 AVKCRQSEFYDXXXXXXXKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIYKGKAALTVEP 362
+VK RQ+++++ +PS S N A SPA R YVGHSIYKGKAALTVEP
Sbjct: 49 SVKSRQTDYFEKQRFGDSSSSPSYSSQN----AEGSPA---RFYVGHSIYKGKAALTVEP 101
Query: 363 RAPEFAALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDS 542
RAPEF ALDSGAFK++++GF+LLQFAP+AGVRQYDWS+KQVFSLSVTEIGT++SLG ++S
Sbjct: 102 RAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPKES 161
Query: 543 CEFFHDP 563
CEFFHDP
Sbjct: 162 CEFFHDP 168
>ref|XP_002875143.1| ATWHY3/PTAC11 [Arabidopsis lyrata subsp. lyrata]
gi|297320981|gb|EFH51402.1| ATWHY3/PTAC11 [Arabidopsis
lyrata subsp. lyrata]
Length = 268
Score = 166 bits (421), Expect = 3e-39
Identities = 81/127 (63%), Positives = 98/127 (77%)
Frame = +3
Query: 183 AVKCRQSEFYDXXXXXXXKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIYKGKAALTVEP 362
+VK RQ ++++ + DSS + + + PR YVGHSIYKGKAALT+EP
Sbjct: 55 SVKSRQDDYFE------------KQRFGDSSSSQNAEGSSPRFYVGHSIYKGKAALTIEP 102
Query: 363 RAPEFAALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDS 542
RAPEF AL+SGAFK+ +EGF+LLQFAPAAGVRQYDWSRKQVFSLSVTEIG ++SLG R+S
Sbjct: 103 RAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRES 162
Query: 543 CEFFHDP 563
CEFFHDP
Sbjct: 163 CEFFHDP 169
>ref|XP_006357267.1| PREDICTED: DNA-binding protein p24 [Solanum tuberosum]
gi|75174555|sp|Q9LL85.1|WHY1_SOLTU RecName:
Full=Single-stranded DNA-binding protein WHY1,
chloroplastic; AltName: Full=DNA-binding protein p24;
AltName: Full=PR-10a binding factor 2; Short=PBF-2;
AltName: Full=Protein WHIRLY 1; Short=StWhy1; Flags:
Precursor gi|9651810|gb|AAF91282.1|AF233342_1
DNA-binding protein p24 [Solanum tuberosum]
Length = 274
Score = 166 bits (420), Expect = 4e-39
Identities = 91/159 (57%), Positives = 111/159 (69%), Gaps = 2/159 (1%)
Frame = +3
Query: 93 FSSLQSFRTTSTTFI-HTISAPRRLSTNTNRAVKCRQSEFYDXXXXXXXKYNPSRPSSND 269
F+ L S T S + + H + PR LS + CR S++++ P
Sbjct: 37 FAPLSSNTTKSFSGLTHKAALPRNLS------LTCRHSDYFE-------------PQQQQ 77
Query: 270 SSFASQSP-AAVPRVYVGHSIYKGKAALTVEPRAPEFAALDSGAFKVAREGFVLLQFAPA 446
Q A+ P+V+VG+SIYKGKAALTVEPR+PEF+ LDSGAFK++REG V+LQFAPA
Sbjct: 78 QQQQQQPQGASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMVMLQFAPA 137
Query: 447 AGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHDP 563
AGVRQYDWSRKQVFSLSVTEIG+IISLGA+DSCEFFHDP
Sbjct: 138 AGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFHDP 176
>dbj|BAF02013.1| hypothetical protein [Arabidopsis thaliana]
Length = 268
Score = 166 bits (419), Expect = 5e-39
Identities = 81/137 (59%), Positives = 101/137 (73%)
Frame = +3
Query: 153 PRRLSTNTNRAVKCRQSEFYDXXXXXXXKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIY 332
P + + VK RQS++++ + DSS + + + PR YVGHSIY
Sbjct: 45 PLKPTARLKLTVKSRQSDYFE------------KQRFGDSSSSQNAEVSSPRFYVGHSIY 92
Query: 333 KGKAALTVEPRAPEFAALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIG 512
KGKAALT+EPRAPEF AL+SGAFK+ +EGF+LLQFAPAAGVRQYDWS+K+VFSLSVTEIG
Sbjct: 93 KGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSKKRVFSLSVTEIG 152
Query: 513 TIISLGARDSCEFFHDP 563
++SLG R+SCEFFHDP
Sbjct: 153 NLVSLGPRESCEFFHDP 169
>ref|XP_006291681.1| hypothetical protein CARUB_v10017841mg [Capsella rubella]
gi|482560388|gb|EOA24579.1| hypothetical protein
CARUB_v10017841mg [Capsella rubella]
Length = 269
Score = 164 bits (415), Expect = 1e-38
Identities = 83/137 (60%), Positives = 99/137 (72%)
Frame = +3
Query: 153 PRRLSTNTNRAVKCRQSEFYDXXXXXXXKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIY 332
P + + VK RQ ++++ + + SS + + PR YVGHSIY
Sbjct: 45 PLKPTARLKLTVKSRQGDYFE-----------KQRFGDSSSPPQNTEGSSPRFYVGHSIY 93
Query: 333 KGKAALTVEPRAPEFAALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIG 512
KGKAALTVEPRAPEF AL+SGAFK+ +EGF+LLQFAPAAGVRQYDWSRKQVFSLSVTEIG
Sbjct: 94 KGKAALTVEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIG 153
Query: 513 TIISLGARDSCEFFHDP 563
+ISLG R+SCEFFHDP
Sbjct: 154 NLISLGPRESCEFFHDP 170
>ref|XP_002892804.1| ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyrata]
gi|297338646|gb|EFH69063.1| ATWHY1/PTAC1 [Arabidopsis
lyrata subsp. lyrata]
Length = 264
Score = 164 bits (414), Expect = 2e-38
Identities = 81/128 (63%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Frame = +3
Query: 183 AVKCRQSEFYDXXXXXXXKYNPSRPSSNDSSFASQSPAAVP-RVYVGHSIYKGKAALTVE 359
+VK RQ+++++ + + SS +SQ+ +P R YVGHSIYKGKAALT+E
Sbjct: 50 SVKSRQTDYFE-----------KQRFGDSSSSSSQNAEGLPARFYVGHSIYKGKAALTME 98
Query: 360 PRAPEFAALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARD 539
PRAPEF ALDSGAFK++++GF+LLQFAP+AGVRQYDWS+KQVFSLSVTEIGT++SLG R+
Sbjct: 99 PRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRE 158
Query: 540 SCEFFHDP 563
SCEFFHDP
Sbjct: 159 SCEFFHDP 166
>ref|XP_004238773.1| PREDICTED: single-stranded DNA-bindig protein WHY1,
chloroplastic-like [Solanum lycopersicum]
Length = 268
Score = 163 bits (413), Expect = 2e-38
Identities = 93/175 (53%), Positives = 116/175 (66%), Gaps = 15/175 (8%)
Frame = +3
Query: 84 PNTFSSLQSFRTTSTTFIHTISAPRRLSTNT---------------NRAVKCRQSEFYDX 218
P SS SF ++ I+TI AP L++NT N ++ CR S++++
Sbjct: 18 PTKTSSYLSFSSS----INTIFAP--LTSNTTKSFSGLTYKAALPRNLSLTCRHSDYFE- 70
Query: 219 XXXXXXKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIYKGKAALTVEPRAPEFAALDSGA 398
P A+ P+V+VG+SIYKGKAALTVEPR+PEF+ LDSGA
Sbjct: 71 ------------PQQQQQQLQG---ASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGA 115
Query: 399 FKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHDP 563
FK+++EG V+LQFAPAAGVRQYDWSRKQVFSLSVTEIG+IISLGA+DSCEFFHDP
Sbjct: 116 FKLSKEGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFHDP 170
>gb|ESQ33048.1| hypothetical protein EUTSA_v10004763mg [Eutrema salsugineum]
Length = 273
Score = 163 bits (412), Expect = 3e-38
Identities = 93/181 (51%), Positives = 117/181 (64%), Gaps = 5/181 (2%)
Frame = +3
Query: 36 MLSSPVTSTQNPKLW-----TPNTFSSLQSFRTTSTTFIHTISAPRRLSTNTNRAVKCRQ 200
+LSSP + N K++ T + F + SF F +A +LS VK RQ
Sbjct: 8 LLSSPPMAA-NSKIFINHRFTDSRFLTAGSFSGKRDGFAVKPTARVKLS------VKSRQ 60
Query: 201 SEFYDXXXXXXXKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIYKGKAALTVEPRAPEFA 380
++++ +P N + + PR YVGHSIYKGKAALT+EPRAPEF
Sbjct: 61 EDYFEKQRFGDSSSSPPYSPQN-------AEGSSPRYYVGHSIYKGKAALTIEPRAPEFV 113
Query: 381 ALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHD 560
AL+SGAFK+++EGF+LLQFAPAAGVRQYDWSRKQVFSLSV EIG ++SLG R+SCEFFHD
Sbjct: 114 ALESGAFKLSKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVPEIGNLVSLGPRESCEFFHD 173
Query: 561 P 563
P
Sbjct: 174 P 174