BLASTX nr result

ID: Jatropha_contig00014030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00014030
         (613 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530313.1| pentatricopeptide repeat-containing protein,...   112   1e-22
ref|XP_004230378.1| PREDICTED: pentatricopeptide repeat-containi...    63   7e-08
gb|ERN03219.1| hypothetical protein AMTR_s00003p00166290 [Ambore...    62   1e-07
ref|XP_006358504.1| PREDICTED: pentatricopeptide repeat-containi...    62   2e-07
gb|EOY17477.1| Tetratricopeptide repeat-like superfamily protein...    60   5e-07
gb|EMJ06797.1| hypothetical protein PRUPE_ppa008917mg [Prunus pe...    58   2e-06

>ref|XP_002530313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530169|gb|EEF32080.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 328

 Score =  112 bits (279), Expect = 1e-22
 Identities = 66/148 (44%), Positives = 66/148 (44%)
 Frame = +1

Query: 169 MQMEVLAMSQAXXXXXXXXXXXXXXXXXXXXXXXXXXPGPLCXXXXXXXXXXXXXXXXXX 348
           MQMEVLAMSQA                          PGPLC                  
Sbjct: 1   MQMEVLAMSQATRLRLFLKRSLLSKLSFTSTATSKATPGPLCPPWLLRLVRSSPSRLPPQ 60

Query: 349 XXXXXNALAYLQHQNQLRSFCXXXXXXXXXXXXXXXXXVNFXXXXXXXXXXXXXXXXKNK 528
                NALAYLQHQNQLRSFC                 VNF                KNK
Sbjct: 61  QPPVLNALAYLQHQNQLRSFCSKPTSEKETTKTITNTKVNFSLSDSDSDSDLDSEDSKNK 120

Query: 529 EIDKTKLPPPYDPFNKKPVIEEPDDPNN 612
           EIDKTKLPPPYDPFNKKPVIEEPDDPNN
Sbjct: 121 EIDKTKLPPPYDPFNKKPVIEEPDDPNN 148


>ref|XP_004230378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like [Solanum lycopersicum]
          Length = 323

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +1

Query: 526 KEIDKTKLPPPYDPFNKKPVIEEPDDPNN 612
           KEIDK+KLPPPYDPFNKKPVIEEP+DP N
Sbjct: 112 KEIDKSKLPPPYDPFNKKPVIEEPEDPTN 140


>gb|ERN03219.1| hypothetical protein AMTR_s00003p00166290 [Amborella trichopoda]
          Length = 323

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = +1

Query: 520 KNKEIDKTKLPPPYDPFNKKPVIEEPDDPNN 612
           KNK IDK+KLPPPYDPF+KKPV+EEP+DP N
Sbjct: 115 KNKVIDKSKLPPPYDPFSKKPVVEEPEDPKN 145


>ref|XP_006358504.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like [Solanum tuberosum]
          Length = 322

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +1

Query: 526 KEIDKTKLPPPYDPFNKKPVIEEPDDPNN 612
           K+IDK+KLPPPYDPFNKKPVIEEP+DP N
Sbjct: 111 KQIDKSKLPPPYDPFNKKPVIEEPEDPTN 139


>gb|EOY17477.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 314

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 23/31 (74%), Positives = 28/31 (90%)
 Frame = +1

Query: 520 KNKEIDKTKLPPPYDPFNKKPVIEEPDDPNN 612
           + +E+DK+KLPPPYDPFNKKP+IEEP DP N
Sbjct: 103 RKQELDKSKLPPPYDPFNKKPIIEEPQDPKN 133


>gb|EMJ06797.1| hypothetical protein PRUPE_ppa008917mg [Prunus persica]
          Length = 314

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +1

Query: 526 KEIDKTKLPPPYDPFNKKPVIEEPDDPNN 612
           KEIDK+KLPPPYDPFNKKP IE+P+DP +
Sbjct: 114 KEIDKSKLPPPYDPFNKKPAIEDPEDPKD 142


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