BLASTX nr result

ID: Jatropha_contig00013953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00013953
         (315 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE89551.2| hypothetical protein POPTR_0008s07350g [Populus t...    68   1e-09
ref|XP_002312184.1| chromatin remodeling complex subunit [Populu...    68   1e-09
ref|XP_002520793.1| ATP-dependent helicase, putative [Ricinus co...    65   9e-09
gb|EEF01305.2| hypothetical protein POPTR_0010s19110g [Populus t...    60   4e-07
ref|XP_002315133.1| hypothetical protein POPTRDRAFT_567215 [Popu...    60   4e-07

>gb|EEE89551.2| hypothetical protein POPTR_0008s07350g [Populus trichocarpa]
          Length = 1234

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = -2

Query: 143 ICGFVSTEVKYVTAPFMEYVGWTAENRPWNVEDSDGKPGEEDG 15
           ICGFV TE+KYV+APFME+ GWTAE++P N ED + KP E++G
Sbjct: 579 ICGFVKTEIKYVSAPFMEHTGWTAESKPQNEEDLELKPDEDEG 621



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = +1

Query: 136 PHIVDQWEQFKAKTCTGQSEKMGPPATEDDGETSETEMLWR 258
           P I+DQWE+FKAK  + Q EKM P + +DDGE+SETEMLWR
Sbjct: 504 PRIIDQWEEFKAKHSSDQKEKMEPSSVKDDGESSETEMLWR 544


>ref|XP_002312184.1| chromatin remodeling complex subunit [Populus trichocarpa]
          Length = 1234

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = -2

Query: 143 ICGFVSTEVKYVTAPFMEYVGWTAENRPWNVEDSDGKPGEEDG 15
           ICGFV TE+KYV+APFME+ GWTAE++P N ED + KP E++G
Sbjct: 579 ICGFVKTEIKYVSAPFMEHTGWTAESKPQNEEDLELKPDEDEG 621



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = +1

Query: 136 PHIVDQWEQFKAKTCTGQSEKMGPPATEDDGETSETEMLWR 258
           P I+DQWE+FKAK  + Q EKM P + +DDGE+SETEMLWR
Sbjct: 504 PRIIDQWEEFKAKHSSDQKEKMEPSSVKDDGESSETEMLWR 544


>ref|XP_002520793.1| ATP-dependent helicase, putative [Ricinus communis]
           gi|223539924|gb|EEF41502.1| ATP-dependent helicase,
           putative [Ricinus communis]
          Length = 1246

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = -2

Query: 143 ICGFVSTEVKYVTAPFMEYVGWTAENRPWNVEDSDGKPGEEDG 15
           +CGFVSTEVK+V+APF+EYVGWTAE+RP   EDS   PGE++G
Sbjct: 594 LCGFVSTEVKFVSAPFVEYVGWTAESRPCIDEDS-RNPGEDEG 635



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/42 (69%), Positives = 32/42 (76%)
 Frame = +1

Query: 133 KPHIVDQWEQFKAKTCTGQSEKMGPPATEDDGETSETEMLWR 258
           +P I+DQWEQFKAK  T QS+K     TEDDGE SETEMLWR
Sbjct: 506 EPDIIDQWEQFKAKRHTVQSDKKELSPTEDDGEESETEMLWR 547


>gb|EEF01305.2| hypothetical protein POPTR_0010s19110g [Populus trichocarpa]
          Length = 1240

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/39 (66%), Positives = 30/39 (76%)
 Frame = +1

Query: 142 IVDQWEQFKAKTCTGQSEKMGPPATEDDGETSETEMLWR 258
           I+DQWE+FKAK  + Q E M P   EDDGE+SETEMLWR
Sbjct: 546 IIDQWEEFKAKHSSDQKETMEPSLVEDDGESSETEMLWR 584


>ref|XP_002315133.1| hypothetical protein POPTRDRAFT_567215 [Populus trichocarpa]
          Length = 239

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/39 (66%), Positives = 30/39 (76%)
 Frame = +1

Query: 142 IVDQWEQFKAKTCTGQSEKMGPPATEDDGETSETEMLWR 258
           I+DQWE+FKAK  + Q E M P   EDDGE+SETEMLWR
Sbjct: 153 IIDQWEEFKAKHSSDQKETMEPSLVEDDGESSETEMLWR 191


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