BLASTX nr result

ID: Jatropha_contig00013696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00013696
         (345 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein A...    56   5e-06

>ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 407

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 33/106 (31%), Positives = 55/106 (51%)
 Frame = +2

Query: 14  GSNLCSWASIALGLFSIGSAYRLDKTGANEVLNRIWSWVHKLPVAQKVCMFLWIFQHQRL 193
           GS+   W + A G F + SAY       +  LN  W+++ ++ +  K+  FLW F H++L
Sbjct: 263 GSDTLIWGATANGKFFVKSAYN-SLFDMSAPLNPQWNYIWRMKIPPKLKTFLWTFLHKKL 321

Query: 194 MANQERCRSGFIDCSLCPHAAGEMETSVLLSVDWFKVFVLIFSTFI 331
           + N +R   GF   +LCP      E+ + L  D  +  VLI++ F+
Sbjct: 322 LTNMQRVTRGFTASALCPICQSADESFLHLFRDCPR-SVLIWNAFV 366


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