BLASTX nr result

ID: Jatropha_contig00013624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00013624
         (298 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago ...    79   8e-13
ref|NP_054927.1| hypothetical protein SpolCp017 [Spinacia olerac...    62   1e-07
gb|AFK48586.1| unknown [Medicago truncatula]                           59   8e-07
ref|XP_003605618.1| Photosystem II reaction center protein M [Me...    46   6e-06

>ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago truncatula]
           gi|355518112|gb|AES99735.1| hypothetical protein
           MTR_5g084150 [Medicago truncatula]
          Length = 187

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 43/79 (54%), Positives = 45/79 (56%)
 Frame = -3

Query: 239 FRENKGVISFHGGSVNYWAELDLNQRRHIANEFTVRPH*PLGHRPRKNQFQTY**SMINF 60
           F+  K VIS HGGSVN+WAELDLNQRRHIANEFT                          
Sbjct: 5   FKNTKWVISLHGGSVNFWAELDLNQRRHIANEFT-------------------------- 38

Query: 59  LS*YPTPRGSRIPAASLKE 3
              YPTPRGSRIP ASLKE
Sbjct: 39  ---YPTPRGSRIPVASLKE 54


>ref|NP_054927.1| hypothetical protein SpolCp017 [Spinacia oleracea]
           gi|7636100|emb|CAB88720.1| hypothetical protein
           [Spinacia oleracea]
          Length = 83

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/46 (73%), Positives = 36/46 (78%)
 Frame = +3

Query: 111 MPERLMGTDCKFVGNMSTLVQIQLGPIIH*SAMK*YNPLVLSKYLI 248
           MPERLMGTDCKFVGNMSTLVQIQLGPII  S ++     VL K LI
Sbjct: 1   MPERLMGTDCKFVGNMSTLVQIQLGPIISSSIIE-MKVFVLPKRLI 45


>gb|AFK48586.1| unknown [Medicago truncatula]
          Length = 29

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +3

Query: 111 MPERLMGTDCKFVGNMSTLVQIQLGPIIH 197
           MPERLMGTDCKFVGNMSTLVQIQLGP I+
Sbjct: 1   MPERLMGTDCKFVGNMSTLVQIQLGPKIY 29


>ref|XP_003605618.1| Photosystem II reaction center protein M [Medicago truncatula]
           gi|355506673|gb|AES87815.1| Photosystem II reaction
           center protein M [Medicago truncatula]
          Length = 164

 Score = 46.2 bits (108), Expect(2) = 6e-06
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = +3

Query: 120 RLMGTDCKFVGNMSTLVQIQLGPII 194
           RLMGTDCKFVGNMSTLVQIQL  ++
Sbjct: 71  RLMGTDCKFVGNMSTLVQIQLVQLV 95



 Score = 29.3 bits (64), Expect(2) = 6e-06
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 1  LSFKEAAGIRLPLG 42
          LSFKEA GIRLPLG
Sbjct: 57 LSFKEATGIRLPLG 70


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