BLASTX nr result

ID: Jatropha_contig00013394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00013394
         (237 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [...    72   9e-11
dbj|BAG15857.1| glycine-rich protein [Bruguiera gymnorhiza]            72   9e-11
emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]    72   9e-11
gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus...    69   8e-10
gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x...    68   1e-09
gb|ERP62303.1| hypothetical protein POPTR_0004s16260g [Populus t...    67   2e-09
dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]       67   2e-09
ref|XP_002305429.1| predicted protein [Populus trichocarpa] gi|1...    67   2e-09
ref|XP_004289674.1| PREDICTED: uncharacterized protein LOC101299...    67   3e-09
ref|XP_004289673.1| PREDICTED: uncharacterized protein LOC101299...    67   3e-09
gb|EOX98019.1| Glycine-rich RNA-binding protein 7 [Theobroma cacao]    66   4e-09
gb|EMJ18708.1| hypothetical protein PRUPE_ppa025004mg, partial [...    66   4e-09
emb|CBI32594.3| unnamed protein product [Vitis vinifera]               66   4e-09
gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsu...    66   4e-09
ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein ...    66   4e-09
gb|ERN16113.1| hypothetical protein AMTR_s00030p00195240 [Ambore...    66   5e-09
gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]      66   5e-09
dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana s...    65   7e-09
ref|XP_002313795.1| predicted protein [Populus trichocarpa]            65   9e-09
gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]       65   9e-09

>ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 166

 Score = 71.6 bits (174), Expect = 9e-11
 Identities = 35/37 (94%), Positives = 35/37 (94%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS
Sbjct: 50  GFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 86


>dbj|BAG15857.1| glycine-rich protein [Bruguiera gymnorhiza]
          Length = 163

 Score = 71.6 bits (174), Expect = 9e-11
 Identities = 35/37 (94%), Positives = 35/37 (94%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS
Sbjct: 53  GFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 89


>emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
          Length = 165

 Score = 71.6 bits (174), Expect = 9e-11
 Identities = 35/37 (94%), Positives = 35/37 (94%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS
Sbjct: 50  GFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 86


>gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
          Length = 178

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 33/37 (89%), Positives = 35/37 (94%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTF+NEK+MRDAIEGMNGQNLDGRNITVNEAQS
Sbjct: 50  GFGFVTFSNEKAMRDAIEGMNGQNLDGRNITVNEAQS 86


>gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
           gi|2267569|gb|AAB63582.1| glycine-rich RNA binding
           protein 2 [Pelargonium x hortorum]
          Length = 166

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTF+NEKSM DAIEGMNGQNLDGRNITVNEAQS
Sbjct: 50  GFGFVTFSNEKSMNDAIEGMNGQNLDGRNITVNEAQS 86


>gb|ERP62303.1| hypothetical protein POPTR_0004s16260g [Populus trichocarpa]
          Length = 158

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTFNNEK+MRDAI+GMNGQ+LDGRNITVNEAQS
Sbjct: 49  GFGFVTFNNEKAMRDAIDGMNGQDLDGRNITVNEAQS 85


>dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
          Length = 167

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTF +EKSMRDAIEGMNGQNLDGRNITVNEAQS
Sbjct: 50  GFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQS 86


>ref|XP_002305429.1| predicted protein [Populus trichocarpa] gi|118481826|gb|ABK92850.1|
           unknown [Populus trichocarpa]
           gi|222848393|gb|EEE85940.1| glycine-rich RNA-binding
           family protein [Populus trichocarpa]
          Length = 165

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTFNNEK+MRDAI+GMNGQ+LDGRNITVNEAQS
Sbjct: 49  GFGFVTFNNEKAMRDAIDGMNGQDLDGRNITVNEAQS 85


>ref|XP_004289674.1| PREDICTED: uncharacterized protein LOC101299909 isoform 2 [Fragaria
           vesca subsp. vesca]
          Length = 161

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTF+NEK+MRDAIEGMNGQ+LDGRNITVNEAQS
Sbjct: 34  GFGFVTFSNEKAMRDAIEGMNGQDLDGRNITVNEAQS 70


>ref|XP_004289673.1| PREDICTED: uncharacterized protein LOC101299909 isoform 1 [Fragaria
           vesca subsp. vesca]
          Length = 177

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTF+NEK+MRDAIEGMNGQ+LDGRNITVNEAQS
Sbjct: 50  GFGFVTFSNEKAMRDAIEGMNGQDLDGRNITVNEAQS 86


>gb|EOX98019.1| Glycine-rich RNA-binding protein 7 [Theobroma cacao]
          Length = 168

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 32/37 (86%), Positives = 34/37 (91%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTF +EK+MRDAIEGMNGQNLDGRNITVNEAQS
Sbjct: 50  GFGFVTFRDEKAMRDAIEGMNGQNLDGRNITVNEAQS 86


>gb|EMJ18708.1| hypothetical protein PRUPE_ppa025004mg, partial [Prunus persica]
          Length = 91

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 30/33 (90%), Positives = 33/33 (100%)
 Frame = -2

Query: 191 VTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           VTFNNEK+MRDAIEG+NGQNLDGRNIT+NEAQS
Sbjct: 48  VTFNNEKAMRDAIEGINGQNLDGRNITINEAQS 80


>emb|CBI32594.3| unnamed protein product [Vitis vinifera]
          Length = 121

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTF++E+SMRDAIEGMNGQNLDGRNITVNEAQS
Sbjct: 50  GFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVNEAQS 86


>gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
          Length = 168

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 32/37 (86%), Positives = 34/37 (91%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTF +EK+MRDAIEGMNGQNLDGRNITVNEAQS
Sbjct: 50  GFGFVTFRDEKAMRDAIEGMNGQNLDGRNITVNEAQS 86


>ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
           vinifera]
          Length = 162

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTF++E+SMRDAIEGMNGQNLDGRNITVNEAQS
Sbjct: 50  GFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVNEAQS 86


>gb|ERN16113.1| hypothetical protein AMTR_s00030p00195240 [Amborella trichopoda]
          Length = 154

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 32/37 (86%), Positives = 34/37 (91%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTF+NE+SMRDAIEGMNGQ LDGRNITVNEAQS
Sbjct: 50  GFGFVTFSNEQSMRDAIEGMNGQTLDGRNITVNEAQS 86


>gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
          Length = 164

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 32/37 (86%), Positives = 33/37 (89%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTFNNEKSMRDAI+GMN Q LDGRNITVNEAQS
Sbjct: 49  GFGFVTFNNEKSMRDAIQGMNSQELDGRNITVNEAQS 85


>dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
          Length = 165

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/37 (86%), Positives = 34/37 (91%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTF +EKSMRDAIEGMNGQ+LDGRNITVNEAQS
Sbjct: 48  GFGFVTFGDEKSMRDAIEGMNGQDLDGRNITVNEAQS 84


>ref|XP_002313795.1| predicted protein [Populus trichocarpa]
          Length = 128

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTF NEK+MRDAI+GMNGQ+LDGRNITVNEAQS
Sbjct: 48  GFGFVTFGNEKAMRDAIDGMNGQDLDGRNITVNEAQS 84


>gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 171

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = -2

Query: 203 G*GSVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 93
           G G VTF NEK+MRDAI+GMNGQ+LDGRNITVNEAQS
Sbjct: 49  GFGFVTFGNEKAMRDAIDGMNGQDLDGRNITVNEAQS 85


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