BLASTX nr result

ID: Jatropha_contig00012947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00012947
         (625 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW30804.1| hypothetical protein PHAVU_002G183800g [Phaseolus...    68   2e-09
ref|XP_004515984.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_004236404.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_006343099.1| PREDICTED: putative pentatricopeptide repeat...    60   6e-07
ref|XP_006343098.1| PREDICTED: putative pentatricopeptide repeat...    60   6e-07
gb|EOY06179.1| Tetratricopeptide repeat-like superfamily protein...    58   2e-06
gb|ESR33580.1| hypothetical protein CICLE_v10004631mg [Citrus cl...    57   3e-06

>gb|ESW30804.1| hypothetical protein PHAVU_002G183800g [Phaseolus vulgaris]
          Length = 573

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 48/115 (41%), Positives = 64/115 (55%), Gaps = 11/115 (9%)
 Frame = +1

Query: 94  DWRHERMEEIYSTLA---AEIEKLGYVPVWDEMLNDV*QKRR-------TREIGKNFGIT 243
           DW+HER +EIY  LA    +IEKLGYVPVWDE+L++V +++R       + ++   FG+ 
Sbjct: 455 DWKHERSKEIYQKLAELMGDIEKLGYVPVWDEVLHNVREEKRKEALWYHSEKLAVAFGML 514

Query: 244 VRR*LLHSV*LTEWPYLRGIEDCXXXXXXXXXA*IVFKYFSNV-EREIIVRDVNR 405
                L    L     LR  +DC           + FKY + V EREIIVRDVNR
Sbjct: 515 CGS-ALPGKPLRIVKNLRICKDCH----------VAFKYMTRVLEREIIVRDVNR 558


>ref|XP_004515984.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cicer arietinum]
          Length = 566

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 47/115 (40%), Positives = 62/115 (53%), Gaps = 11/115 (9%)
 Frame = +1

Query: 94  DWRHERMEEIY---STLAAEIEKLGYVPVWDEMLNDV*QKRR-------TREIGKNFGIT 243
           DW+HER  EIY   S L  +IEKLGYVPVWDE+L++V +++R       + ++   FG+ 
Sbjct: 448 DWKHERSVEIYQKLSELMGDIEKLGYVPVWDELLHNVGEEKRKEALWYHSEKLAVAFGVL 507

Query: 244 VRR*LLHSV*LTEWPYLRGIEDCXXXXXXXXXA*IVFKYFSNV-EREIIVRDVNR 405
               +     L     LR  +DC             FKY + V EREIIVRDVNR
Sbjct: 508 CGS-VPQGKPLRIVKNLRICKDCHE----------AFKYMTRVLEREIIVRDVNR 551


>ref|XP_004236404.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Solanum lycopersicum]
          Length = 655

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 48/114 (42%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
 Frame = +1

Query: 94  DWRHERMEEIYSTLAA---EIEKLGYVPVWDEMLNDV*QKRRTREIGKNF-GITVRR*LL 261
           D RHER +EIY+ L     EIEKLGYVPVW EML++V +K + + +  +   + +   LL
Sbjct: 446 DRRHERTDEIYAKLTELMEEIEKLGYVPVWTEMLHEVEEKEKKKSLWHHSEKLALAFGLL 505

Query: 262 HSV-----*LTEWPYLRGIEDCXXXXXXXXXA*IVFKYFSN-VEREIIVRDVNR 405
           +        L     LR   DC             FKY S  VEREIIVRDVNR
Sbjct: 506 NGTAPPGKALRIVKNLRICRDCHE----------AFKYISRLVEREIIVRDVNR 549


>ref|XP_006343099.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like isoform X2 [Solanum tuberosum]
          Length = 563

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 48/114 (42%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
 Frame = +1

Query: 94  DWRHERMEEIYSTLAA---EIEKLGYVPVWDEMLNDV*QKRRTREIGKNF-GITVRR*LL 261
           D RHER  EIY+ L     EIEKLGYVPVW EML++V +K + + +  +   + +   LL
Sbjct: 446 DRRHERTNEIYAKLTELMEEIEKLGYVPVWTEMLHEVEEKEKKKSLWHHSEKLALAFGLL 505

Query: 262 HSV-----*LTEWPYLRGIEDCXXXXXXXXXA*IVFKYFSN-VEREIIVRDVNR 405
           +        L     LR   DC             FKY S  VEREIIVRDVNR
Sbjct: 506 NGTAPPGKALRIVKNLRICRDCHE----------AFKYISRLVEREIIVRDVNR 549


>ref|XP_006343098.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like isoform X1 [Solanum tuberosum]
          Length = 564

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 48/114 (42%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
 Frame = +1

Query: 94  DWRHERMEEIYSTLAA---EIEKLGYVPVWDEMLNDV*QKRRTREIGKNF-GITVRR*LL 261
           D RHER  EIY+ L     EIEKLGYVPVW EML++V +K + + +  +   + +   LL
Sbjct: 446 DRRHERTNEIYAKLTELMEEIEKLGYVPVWTEMLHEVEEKEKKKSLWHHSEKLALAFGLL 505

Query: 262 HSV-----*LTEWPYLRGIEDCXXXXXXXXXA*IVFKYFSN-VEREIIVRDVNR 405
           +        L     LR   DC             FKY S  VEREIIVRDVNR
Sbjct: 506 NGTAPPGKALRIVKNLRICRDCHE----------AFKYISRLVEREIIVRDVNR 549


>gb|EOY06179.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 572

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 50/115 (43%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
 Frame = +1

Query: 94  DWRHERMEEIYSTLAA---EIEKLGYVPVWDEMLNDV--*QKR-----RTREIGKNFGIT 243
           D +HER EEIY+ LA    EIEKLGY PVWDEML++V   +KR      + ++   +GI 
Sbjct: 454 DRKHERTEEIYAKLAELMEEIEKLGYKPVWDEMLHEVGKGEKREALWYHSEKLALAYGI- 512

Query: 244 VRR*LLHSV*LTEWPYLRGIEDCXXXXXXXXXA*IVFKYFSNV-EREIIVRDVNR 405
           V         L     LR  +DC             FKY S V E+EIIVRDVNR
Sbjct: 513 VSDAAPPGKPLRIIKNLRICKDCHE----------AFKYISRVIEKEIIVRDVNR 557


>gb|ESR33580.1| hypothetical protein CICLE_v10004631mg [Citrus clementina]
          Length = 575

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 44/115 (38%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
 Frame = +1

Query: 94  DWRHERMEEIYSTLAA---EIEKLGYVPVWDEMLNDV*QKRR-------TREIGKNFGIT 243
           D  HER E+IY+ LA    E E+LGYVPVWDEML++V  + +       + ++   FG+ 
Sbjct: 458 DRMHERTEDIYAKLAELMEECERLGYVPVWDEMLHNVGDREKKEALWYHSEKLALAFGLV 517

Query: 244 VRR*LLHSV*LTEWPYLRGIEDCXXXXXXXXXA*IVFKYFSN-VEREIIVRDVNR 405
                  ++ + +   LR   DC             FKY S  VEREI+VRDVNR
Sbjct: 518 SGAPRGKTLRIVK--NLRICRDCHES----------FKYISRVVEREIVVRDVNR 560


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