BLASTX nr result

ID: Jatropha_contig00012868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00012868
         (512 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ERP60743.1| hypothetical protein POPTR_0005s09300g [Populus t...    57   2e-06
gb|ERP60742.1| hypothetical protein POPTR_0005s09300g [Populus t...    57   2e-06
ref|XP_002521533.1| ring finger protein, putative [Ricinus commu...    57   2e-06

>gb|ERP60743.1| hypothetical protein POPTR_0005s09300g [Populus trichocarpa]
          Length = 316

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/75 (45%), Positives = 41/75 (54%)
 Frame = +2

Query: 287 NNPKLGSGEAKSIGXXXXXXXXXXXXXXXXXLNLGSANDNNGDEEEQEAQPPRQSSRRTP 466
           +N KLGSGE+K+                      G   + +G+ E     P RQ+SRRTP
Sbjct: 11  SNTKLGSGESKNNNSEQQEENPNLSSN-------GEQQEGDGEREGGGGGPQRQTSRRTP 63

Query: 467 FTNLSQVDADLALAR 511
           FTNLSQVDADLALAR
Sbjct: 64  FTNLSQVDADLALAR 78


>gb|ERP60742.1| hypothetical protein POPTR_0005s09300g [Populus trichocarpa]
          Length = 314

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/75 (45%), Positives = 41/75 (54%)
 Frame = +2

Query: 287 NNPKLGSGEAKSIGXXXXXXXXXXXXXXXXXLNLGSANDNNGDEEEQEAQPPRQSSRRTP 466
           +N KLGSGE+K+                      G   + +G+ E     P RQ+SRRTP
Sbjct: 11  SNTKLGSGESKNNNSEQQEENPNLSSN-------GEQQEGDGEREGGGGGPQRQTSRRTP 63

Query: 467 FTNLSQVDADLALAR 511
           FTNLSQVDADLALAR
Sbjct: 64  FTNLSQVDADLALAR 78


>ref|XP_002521533.1| ring finger protein, putative [Ricinus communis]
           gi|223539211|gb|EEF40804.1| ring finger protein,
           putative [Ricinus communis]
          Length = 316

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 41/76 (53%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
 Frame = +2

Query: 296 KLGSGEAKSIGXXXXXXXXXXXXXXXXX-LNLGSAND--NNGDEEEQEAQPPRQSS-RRT 463
           KLG GEAKS                    LNLGS+     NG++E+    PPRQSS RRT
Sbjct: 5   KLGLGEAKSNNNSSSSSTKEAEKEEEKANLNLGSSPSATENGEQED----PPRQSSSRRT 60

Query: 464 PFTNLSQVDADLALAR 511
           PFTNLSQVDADLALAR
Sbjct: 61  PFTNLSQVDADLALAR 76


Top