BLASTX nr result
ID: Jatropha_contig00012838
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00012838
(306 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|... 77 3e-12
ref|XP_002262798.2| PREDICTED: transcription initiation factor I... 73 4e-11
emb|CBI33123.3| unnamed protein product [Vitis vinifera] 73 4e-11
emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera] 73 4e-11
ref|XP_003546179.1| PREDICTED: transcription initiation factor I... 71 1e-10
ref|XP_003534809.1| PREDICTED: transcription initiation factor I... 70 4e-10
ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis] gi|... 70 4e-10
gb|ESW19654.1| hypothetical protein PHAVU_006G143600g [Phaseolus... 67 2e-09
gb|ESR63096.1| hypothetical protein CICLE_v10014841mg [Citrus cl... 65 9e-09
gb|ESR63094.1| hypothetical protein CICLE_v10014841mg [Citrus cl... 65 9e-09
gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus... 65 1e-08
ref|XP_006352367.1| PREDICTED: transcription initiation factor I... 64 2e-08
ref|XP_006352364.1| PREDICTED: transcription initiation factor I... 64 2e-08
ref|XP_004250258.1| PREDICTED: transcription initiation factor I... 64 2e-08
gb|ESQ38193.1| hypothetical protein EUTSA_v10028564mg [Eutrema s... 63 3e-08
gb|EEF04299.2| transcription initiation factor IIF alpha subunit... 63 3e-08
ref|XP_006290188.1| hypothetical protein CARUB_v10003868mg, part... 63 3e-08
ref|XP_002872663.1| mutant TFIIF-alpha [Arabidopsis lyrata subsp... 63 3e-08
gb|ERP58675.1| hypothetical protein POPTR_0006s01070g [Populus t... 62 7e-08
ref|XP_002308775.1| predicted protein [Populus trichocarpa] gi|2... 62 7e-08
>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis]
gi|223541454|gb|EEF43004.1| tfiif-alpha, putative
[Ricinus communis]
Length = 533
Score = 76.6 bits (187), Expect = 3e-12
Identities = 47/93 (50%), Positives = 50/93 (53%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
NRLGLNKR GDDDE G R G H DWEHE+IFTDDDEAVGN
Sbjct: 253 NRLGLNKRGGDDDEEGPRGGDHDIDDDDIEKGDDWEHEEIFTDDDEAVGNDREEREDLAP 312
Query: 124 XXXXXXEINQXXXXXXXXXXEGGLSKSGKELEE 26
EI Q EGGLSKSGKEL++
Sbjct: 313 EVPAPPEIKQDEDDEDEENEEGGLSKSGKELKK 345
>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Vitis vinifera]
Length = 534
Score = 72.8 bits (177), Expect = 4e-11
Identities = 47/94 (50%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
NRLGLNKR GDDDE G R G H DWEHE+IFTDDDEAVGN
Sbjct: 249 NRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLAP 308
Query: 124 XXXXXXEINQ-XXXXXXXXXXEGGLSKSGKELEE 26
EI Q EGGLSKSGKEL++
Sbjct: 309 EVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKK 342
>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 72.8 bits (177), Expect = 4e-11
Identities = 47/94 (50%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
NRLGLNKR GDDDE G R G H DWEHE+IFTDDDEAVGN
Sbjct: 254 NRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLAP 313
Query: 124 XXXXXXEINQ-XXXXXXXXXXEGGLSKSGKELEE 26
EI Q EGGLSKSGKEL++
Sbjct: 314 EVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKK 347
>emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]
Length = 435
Score = 72.8 bits (177), Expect = 4e-11
Identities = 47/94 (50%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
NRLGLNKR GDDDE G R G H DWEHE+IFTDDDEAVGN
Sbjct: 150 NRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLAP 209
Query: 124 XXXXXXEINQ-XXXXXXXXXXEGGLSKSGKELEE 26
EI Q EGGLSKSGKEL++
Sbjct: 210 EVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKK 243
>ref|XP_003546179.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Glycine max]
Length = 539
Score = 71.2 bits (173), Expect = 1e-10
Identities = 45/94 (47%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
+RLGLNKR GDDDE G R G H DWEHE+IFTDDDEAVGN
Sbjct: 251 SRLGLNKRAGDDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFTDDDEAVGNDPEEREDLAP 310
Query: 124 XXXXXXEINQ-XXXXXXXXXXEGGLSKSGKELEE 26
EI Q GGLSKSGKEL++
Sbjct: 311 EVPAPPEIKQDEEEEDEDNEEGGGLSKSGKELKK 344
>ref|XP_003534809.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Glycine max]
Length = 541
Score = 69.7 bits (169), Expect = 4e-10
Identities = 45/94 (47%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
+RLGLNKR G+DDE G R G H DWEHE+IFTDDDEAVGN
Sbjct: 251 SRLGLNKRAGEDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFTDDDEAVGNDPEEREDLAP 310
Query: 124 XXXXXXEINQXXXXXXXXXXEG-GLSKSGKELEE 26
EI Q EG GLSKSGKEL++
Sbjct: 311 EVPAPPEIKQDEEEEDEDNEEGEGLSKSGKELKK 344
>ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis]
gi|223530933|gb|EEF32792.1| tfiif-alpha, putative
[Ricinus communis]
Length = 584
Score = 69.7 bits (169), Expect = 4e-10
Identities = 43/92 (46%), Positives = 48/92 (52%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
NRLGLN++ G DD+ G R G H DWEHE+IFTDDDEAVGN
Sbjct: 297 NRLGLNRQGGGDDDEGPRGGDHDMDDDDVEKGDDWEHEEIFTDDDEAVGNDPEERQDLGP 356
Query: 124 XXXXXXEINQXXXXXXXXXXEGGLSKSGKELE 29
EI Q EGGLSKSGKEL+
Sbjct: 357 ELPAPPEIKQDEDDEDEENEEGGLSKSGKELK 388
>gb|ESW19654.1| hypothetical protein PHAVU_006G143600g [Phaseolus vulgaris]
Length = 540
Score = 67.0 bits (162), Expect = 2e-09
Identities = 44/94 (46%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
NRLGL KR DDDE G R G H DWEHE+IFTDDDEAVGN
Sbjct: 251 NRLGLYKRPADDDEEGPRGGDHDLEDDDVEKGDDWEHEEIFTDDDEAVGNDPEEREDLAP 310
Query: 124 XXXXXXEINQ-XXXXXXXXXXEGGLSKSGKELEE 26
EI Q GGLSKSGKEL++
Sbjct: 311 EVPAPPEIKQDEEEEDEDNEEGGGLSKSGKELKK 344
>gb|ESR63096.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
Length = 420
Score = 65.1 bits (157), Expect = 9e-09
Identities = 45/93 (48%), Positives = 48/93 (51%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
NRLGLNKR DDDE G R G DWEHE+IFTDDDEAVGN
Sbjct: 134 NRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVGNDPEEREDLAP 193
Query: 124 XXXXXXEINQXXXXXXXXXXEGGLSKSGKELEE 26
EI Q EGGLSKSGKEL++
Sbjct: 194 EVPAPPEIKQ-DEEDEDEEEEGGLSKSGKELKK 225
>gb|ESR63094.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
gi|557552466|gb|ESR63095.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
Length = 538
Score = 65.1 bits (157), Expect = 9e-09
Identities = 45/93 (48%), Positives = 48/93 (51%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
NRLGLNKR DDDE G R G DWEHE+IFTDDDEAVGN
Sbjct: 252 NRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVGNDPEEREDLAP 311
Query: 124 XXXXXXEINQXXXXXXXXXXEGGLSKSGKELEE 26
EI Q EGGLSKSGKEL++
Sbjct: 312 EVPAPPEIKQ-DEEDEDEEEEGGLSKSGKELKK 343
>gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
Length = 540
Score = 64.7 bits (156), Expect = 1e-08
Identities = 43/94 (45%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
+RLGLNK+ GDDDE G R G DWEHE+IFTDDDEAVGN
Sbjct: 252 SRLGLNKKGGDDDEEGPRGGDLDQDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLAP 311
Query: 124 XXXXXXEINQ-XXXXXXXXXXEGGLSKSGKELEE 26
EI Q GGLSKSGKEL++
Sbjct: 312 EVPAPPEIKQDDEDEDEDNEEGGGLSKSGKELKK 345
>ref|XP_006352367.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X4 [Solanum tuberosum]
Length = 535
Score = 63.9 bits (154), Expect = 2e-08
Identities = 44/94 (46%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
NRLGLNKR DDDE G R G DWEHE+IFTDDDEAVGN
Sbjct: 251 NRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLAP 310
Query: 124 XXXXXXEINQ-XXXXXXXXXXEGGLSKSGKELEE 26
EI Q GGLSKSGKEL++
Sbjct: 311 EIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKK 344
>ref|XP_006352364.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Solanum tuberosum]
gi|565371548|ref|XP_006352365.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X2 [Solanum tuberosum]
gi|565371550|ref|XP_006352366.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X3 [Solanum tuberosum]
Length = 538
Score = 63.9 bits (154), Expect = 2e-08
Identities = 44/94 (46%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
NRLGLNKR DDDE G R G DWEHE+IFTDDDEAVGN
Sbjct: 251 NRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLAP 310
Query: 124 XXXXXXEINQ-XXXXXXXXXXEGGLSKSGKELEE 26
EI Q GGLSKSGKEL++
Sbjct: 311 EIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKK 344
>ref|XP_004250258.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Solanum lycopersicum]
Length = 534
Score = 63.9 bits (154), Expect = 2e-08
Identities = 44/94 (46%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
NRLGLNKR DDDE G R G DWEHE+IFTDDDEAVGN
Sbjct: 251 NRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLAP 310
Query: 124 XXXXXXEINQ-XXXXXXXXXXEGGLSKSGKELEE 26
EI Q GGLSKSGKEL++
Sbjct: 311 EIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKK 344
>gb|ESQ38193.1| hypothetical protein EUTSA_v10028564mg [Eutrema salsugineum]
Length = 542
Score = 63.2 bits (152), Expect = 3e-08
Identities = 43/94 (45%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGN-XXXXXXXXX 128
+RLGLNK+ DDDE G R G DWEHE+IFTDDDEAVGN
Sbjct: 253 SRLGLNKKSNDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLLA 312
Query: 127 XXXXXXXEINQXXXXXXXXXXEGGLSKSGKELEE 26
EI Q EGGLSKSGKEL++
Sbjct: 313 PEIPAPPEIKQDDDDEENEEEEGGLSKSGKELKK 346
>gb|EEF04299.2| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa]
Length = 540
Score = 63.2 bits (152), Expect = 3e-08
Identities = 42/93 (45%), Positives = 47/93 (50%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
+RLGLNK+ GDDDE G R G DWEHE+IFTDDDEAV
Sbjct: 255 SRLGLNKQGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVAIDPEEREDLAP 314
Query: 124 XXXXXXEINQXXXXXXXXXXEGGLSKSGKELEE 26
EI Q EGGLSKSGKEL++
Sbjct: 315 EVPAPPEIKQDEDDEDEENEEGGLSKSGKELKK 347
>ref|XP_006290188.1| hypothetical protein CARUB_v10003868mg, partial [Capsella rubella]
gi|482558894|gb|EOA23086.1| hypothetical protein
CARUB_v10003868mg, partial [Capsella rubella]
Length = 394
Score = 63.2 bits (152), Expect = 3e-08
Identities = 43/94 (45%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGN-XXXXXXXXX 128
+RLGLNK+ DDDE G R G DWEHE+IFTDDDEAVGN
Sbjct: 109 SRLGLNKKSNDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLLA 168
Query: 127 XXXXXXXEINQXXXXXXXXXXEGGLSKSGKELEE 26
EI Q EGGLSKSGKEL++
Sbjct: 169 PEIPAPPEIKQDEDDEENEEEEGGLSKSGKELKK 202
>ref|XP_002872663.1| mutant TFIIF-alpha [Arabidopsis lyrata subsp. lyrata]
gi|297318500|gb|EFH48922.1| mutant TFIIF-alpha
[Arabidopsis lyrata subsp. lyrata]
Length = 619
Score = 63.2 bits (152), Expect = 3e-08
Identities = 43/94 (45%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGN-XXXXXXXXX 128
+RLGLNK+ DDDE G R G DWEHE+IFTDDDEAVGN
Sbjct: 252 SRLGLNKKSNDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLLA 311
Query: 127 XXXXXXXEINQXXXXXXXXXXEGGLSKSGKELEE 26
EI Q EGGLSKSGKEL++
Sbjct: 312 PEIPAPPEIKQDEDDEENEEEEGGLSKSGKELKK 345
>gb|ERP58675.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
Length = 536
Score = 62.0 bits (149), Expect = 7e-08
Identities = 42/93 (45%), Positives = 46/93 (49%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
+RLGLNK GDDDE G R G DWEHE+IFTDDDEAV
Sbjct: 255 SRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVAIDPEEREDLAP 314
Query: 124 XXXXXXEINQXXXXXXXXXXEGGLSKSGKELEE 26
EI Q EGGLSKSGKEL++
Sbjct: 315 EVPAPPEIKQDEEDEDEENEEGGLSKSGKELKK 347
>ref|XP_002308775.1| predicted protein [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 541
Score = 62.0 bits (149), Expect = 7e-08
Identities = 42/93 (45%), Positives = 46/93 (49%)
Frame = -3
Query: 304 NRLGLNKRIGDDDE*GLRVGVHXXXXXXXXXXXDWEHEDIFTDDDEAVGNXXXXXXXXXX 125
+RLGLNK GDDDE G R G DWEHE+IFTDDDEAV
Sbjct: 255 SRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVAIDPEEREDLAP 314
Query: 124 XXXXXXEINQXXXXXXXXXXEGGLSKSGKELEE 26
EI Q EGGLSKSGKEL++
Sbjct: 315 EVPAPPEIKQDEEDEDEENEEGGLSKSGKELKK 347