BLASTX nr result

ID: Jatropha_contig00012738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00012738
         (153 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003563812.1| PREDICTED: photosystem II reaction center pr...    64   2e-08
ref|NP_001045001.1| Os01g0881600 [Oryza sativa Japonica Group] g...    61   1e-07
ref|XP_004987319.1| PREDICTED: photosystem II reaction center pr...    60   2e-07

>ref|XP_003563812.1| PREDICTED: photosystem II reaction center protein J-like
           [Brachypodium distachyon]
           gi|357149895|ref|XP_003575269.1| PREDICTED: photosystem
           II reaction center protein J-like [Brachypodium
           distachyon] gi|357166338|ref|XP_003580677.1| PREDICTED:
           photosystem II reaction center protein J-like
           [Brachypodium distachyon]
          Length = 47

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = +1

Query: 58  MWRKVGEMADTTGRIPLWLVGTVTGIPVI 144
           MWRKVGEMADTTGRIPLWL+GTVTGIPVI
Sbjct: 1   MWRKVGEMADTTGRIPLWLIGTVTGIPVI 29


>ref|NP_001045001.1| Os01g0881600 [Oryza sativa Japonica Group]
           gi|113534532|dbj|BAF06915.1| Os01g0881600 [Oryza sativa
           Japonica Group]
          Length = 47

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +1

Query: 58  MWRKVGEMADTTGRIPLWLVGTVTGIPVI 144
           MWRKVGEMADTTGRIPLWL+GTVTGI VI
Sbjct: 1   MWRKVGEMADTTGRIPLWLIGTVTGIAVI 29


>ref|XP_004987319.1| PREDICTED: photosystem II reaction center protein J-like [Setaria
           italica] gi|514825363|ref|XP_004987335.1| PREDICTED:
           photosystem II reaction center protein J-like [Setaria
           italica]
          Length = 47

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +1

Query: 58  MWRKVGEMADTTGRIPLWLVGTVTGIPVI 144
           MWRKVGEMADTTGRIPLWL+GTVTGI VI
Sbjct: 1   MWRKVGEMADTTGRIPLWLIGTVTGILVI 29


Top