BLASTX nr result

ID: Jatropha_contig00012638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00012638
         (301 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC78944.1| hypothetical protein (mitochondrion) [Vicia faba]       79   6e-13
ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat...    62   2e-11

>gb|AGC78944.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 134

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 50/87 (57%), Positives = 52/87 (59%), Gaps = 16/87 (18%)
 Frame = -2

Query: 264 HLQDKAKNWTLLNKREK--------------PXXXXXXXXXXXXAIFLKRTLESAS--KG 133
           HLQ+KAKNWTLLNKRE                            AI  +RTLESAS  KG
Sbjct: 14  HLQEKAKNWTLLNKRENFLFSKATSKGLSCAKAAFAHPFSCSLAAIKKQRTLESASNSKG 73

Query: 132 AGSPLTDSTATCWHSISSAGTSLGSPA 52
           AGS LTDSTATCWHSISSAG SLGS A
Sbjct: 74  AGSLLTDSTATCWHSISSAGASLGSSA 100


>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
           gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
           [Medicago truncatula]
          Length = 1116

 Score = 62.0 bits (149), Expect(2) = 2e-11
 Identities = 33/39 (84%), Positives = 34/39 (87%), Gaps = 2/39 (5%)
 Frame = -2

Query: 162 KRTLESAS--KGAGSPLTDSTATCWHSISSAGTSLGSPA 52
           +RTLESAS  KGAGS LTDSTATCWHSISSAG SLGS A
Sbjct: 772 QRTLESASNSKGAGSLLTDSTATCWHSISSAGASLGSSA 810



 Score = 32.3 bits (72), Expect(2) = 2e-11
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = -3

Query: 299 RVFLRRQLDVVVTCK 255
           RVFLRRQLDVV+TCK
Sbjct: 731 RVFLRRQLDVVLTCK 745


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