BLASTX nr result
ID: Jatropha_contig00012516
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00012516
(612 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABC55432.1| FLC-like 1 splice variant 4 [Beta vulgaris subsp.... 93 6e-17
gb|ABC55429.1| FLC-like 1 splice variant 2 [Beta vulgaris] gi|12... 93 6e-17
gb|ABC55435.1| FLC-like 1 splice variant 1 [Beta vulgaris subsp.... 93 6e-17
gb|ABC55434.1| FLC-like 1 splice variant 2 [Beta vulgaris subsp.... 93 6e-17
gb|ABC55428.1| FLC-like 1 splice variant 1 [Beta vulgaris] gi|12... 93 6e-17
gb|ABC55430.1| FLC-like 1 splice variant 3 [Beta vulgaris] gi|12... 93 6e-17
gb|ABC55431.1| FLC-like 1 splice variant 4 [Beta vulgaris] gi|12... 93 6e-17
gb|ABC55433.1| FLC-like 1 splice variant 3 [Beta vulgaris subsp.... 93 6e-17
gb|EOX99786.1| Flowering locus C, putative isoform 2 [Theobroma ... 91 2e-16
gb|EOX99785.1| Flowering locus C, putative isoform 1 [Theobroma ... 91 2e-16
emb|CAN67450.1| hypothetical protein VITISV_031401 [Vitis vinifera] 91 3e-16
gb|AEG19540.1| flowering locus C-like protein [Vitis labrusca x ... 90 4e-16
ref|XP_002299316.1| predicted protein [Populus trichocarpa] gi|2... 90 5e-16
gb|AGC94569.1| flowering locus C [Betula platyphylla] 89 1e-15
emb|CCO61905.1| FLC-like, partial [Cichorium intybus] 88 2e-15
ref|NP_001268057.1| flowering locus C [Vitis vinifera] gi|269116... 88 2e-15
gb|AFO10123.1| MADS-box domain protein [Camellia sinensis] 88 2e-15
gb|EPS71515.1| hypothetical protein M569_03244 [Genlisea aurea] 87 3e-15
gb|AFX72878.1| MADS-box protein SEP2B [Aquilegia coerulea] 87 3e-15
gb|ACF85469.1| unknown [Zea mays] gi|413949237|gb|AFW81886.1| pu... 87 3e-15
>gb|ABC55432.1| FLC-like 1 splice variant 4 [Beta vulgaris subsp. maritima]
Length = 214
Score = 92.8 bits (229), Expect = 6e-17
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSSGRS 238
RK+EMKRIED+SSR VTFSKRR+GLIKKAREL ILCDV++ V+VFS GRLYEF +S S
Sbjct: 4 RKIEMKRIEDKSSRQVTFSKRRSGLIKKARELSILCDVDVAVLVFSNRGRLYEFVNSSSS 63
>gb|ABC55429.1| FLC-like 1 splice variant 2 [Beta vulgaris]
gi|124298195|gb|ABN04206.1| FLC-like 1 splice variant 2
[Beta vulgaris subsp. vulgaris]
Length = 201
Score = 92.8 bits (229), Expect = 6e-17
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSSGRS 238
RK+EMKRIED+SSR VTFSKRR+GLIKKAREL ILCDV++ V+VFS GRLYEF +S S
Sbjct: 4 RKIEMKRIEDKSSRQVTFSKRRSGLIKKARELSILCDVDVAVLVFSNRGRLYEFVNSSSS 63
>gb|ABC55435.1| FLC-like 1 splice variant 1 [Beta vulgaris subsp. maritima]
Length = 215
Score = 92.8 bits (229), Expect = 6e-17
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSSGRS 238
RK+EMKRIED+SSR VTFSKRR+GLIKKAREL ILCDV++ V+VFS GRLYEF +S S
Sbjct: 4 RKIEMKRIEDKSSRQVTFSKRRSGLIKKARELSILCDVDVAVLVFSNRGRLYEFVNSSSS 63
>gb|ABC55434.1| FLC-like 1 splice variant 2 [Beta vulgaris subsp. maritima]
Length = 201
Score = 92.8 bits (229), Expect = 6e-17
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSSGRS 238
RK+EMKRIED+SSR VTFSKRR+GLIKKAREL ILCDV++ V+VFS GRLYEF +S S
Sbjct: 4 RKIEMKRIEDKSSRQVTFSKRRSGLIKKARELSILCDVDVAVLVFSNRGRLYEFVNSSSS 63
>gb|ABC55428.1| FLC-like 1 splice variant 1 [Beta vulgaris]
gi|124298194|gb|ABN04205.1| FLC-like 1 splice variant 1
[Beta vulgaris subsp. vulgaris]
Length = 215
Score = 92.8 bits (229), Expect = 6e-17
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSSGRS 238
RK+EMKRIED+SSR VTFSKRR+GLIKKAREL ILCDV++ V+VFS GRLYEF +S S
Sbjct: 4 RKIEMKRIEDKSSRQVTFSKRRSGLIKKARELSILCDVDVAVLVFSNRGRLYEFVNSSSS 63
>gb|ABC55430.1| FLC-like 1 splice variant 3 [Beta vulgaris]
gi|124298196|gb|ABN04207.1| FLC-like 1 splice variant 3
[Beta vulgaris subsp. vulgaris]
Length = 200
Score = 92.8 bits (229), Expect = 6e-17
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSSGRS 238
RK+EMKRIED+SSR VTFSKRR+GLIKKAREL ILCDV++ V+VFS GRLYEF +S S
Sbjct: 4 RKIEMKRIEDKSSRQVTFSKRRSGLIKKARELSILCDVDVAVLVFSNRGRLYEFVNSSSS 63
>gb|ABC55431.1| FLC-like 1 splice variant 4 [Beta vulgaris]
gi|124298197|gb|ABN04208.1| FLC-like 1 splice variant 4
[Beta vulgaris subsp. vulgaris]
Length = 214
Score = 92.8 bits (229), Expect = 6e-17
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSSGRS 238
RK+EMKRIED+SSR VTFSKRR+GLIKKAREL ILCDV++ V+VFS GRLYEF +S S
Sbjct: 4 RKIEMKRIEDKSSRQVTFSKRRSGLIKKARELSILCDVDVAVLVFSNRGRLYEFVNSSSS 63
>gb|ABC55433.1| FLC-like 1 splice variant 3 [Beta vulgaris subsp. maritima]
Length = 200
Score = 92.8 bits (229), Expect = 6e-17
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSSGRS 238
RK+EMKRIED+SSR VTFSKRR+GLIKKAREL ILCDV++ V+VFS GRLYEF +S S
Sbjct: 4 RKIEMKRIEDKSSRQVTFSKRRSGLIKKARELSILCDVDVAVLVFSNRGRLYEFVNSSSS 63
>gb|EOX99786.1| Flowering locus C, putative isoform 2 [Theobroma cacao]
Length = 199
Score = 91.3 bits (225), Expect = 2e-16
Identities = 43/57 (75%), Positives = 52/57 (91%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSS 229
RKV+MKRIED+SSR VTFSKRR+GLIKKAREL +LCDVEI +++FS+ GRLYEF S+
Sbjct: 4 RKVQMKRIEDKSSRQVTFSKRRSGLIKKARELSVLCDVEIALVIFSSRGRLYEFSSA 60
>gb|EOX99785.1| Flowering locus C, putative isoform 1 [Theobroma cacao]
Length = 198
Score = 91.3 bits (225), Expect = 2e-16
Identities = 43/57 (75%), Positives = 52/57 (91%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSS 229
RKV+MKRIED+SSR VTFSKRR+GLIKKAREL +LCDVEI +++FS+ GRLYEF S+
Sbjct: 4 RKVQMKRIEDKSSRQVTFSKRRSGLIKKARELSVLCDVEIALVIFSSRGRLYEFSSA 60
>emb|CAN67450.1| hypothetical protein VITISV_031401 [Vitis vinifera]
Length = 123
Score = 90.5 bits (223), Expect = 3e-16
Identities = 43/72 (59%), Positives = 56/72 (77%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSSGRS 238
+KVE+KRIED+SSR VTFSKRRNGLIKKAREL +LCDV++ V+VFS+ G+LYE+ +
Sbjct: 4 KKVELKRIEDKSSRQVTFSKRRNGLIKKARELSVLCDVDVAVLVFSSRGKLYEYANGNSG 63
Query: 239 EKACTVGYSVFF 274
C+ +FF
Sbjct: 64 SVDCS---QIFF 72
>gb|AEG19540.1| flowering locus C-like protein [Vitis labrusca x Vitis vinifera]
Length = 210
Score = 90.1 bits (222), Expect = 4e-16
Identities = 43/60 (71%), Positives = 54/60 (90%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSSGRS 238
+KVE+KRIED+SSR VTFSKRRNGLIKKAREL +LCDV++ V+VFS+ G+LYE C++G S
Sbjct: 4 KKVELKRIEDKSSRQVTFSKRRNGLIKKARELSVLCDVDVAVLVFSSRGKLYE-CANGNS 62
>ref|XP_002299316.1| predicted protein [Populus trichocarpa] gi|222846574|gb|EEE84121.1|
hypothetical protein POPTR_0001s13660g [Populus
trichocarpa]
Length = 81
Score = 89.7 bits (221), Expect = 5e-16
Identities = 41/59 (69%), Positives = 51/59 (86%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSSGR 235
+KVE+KRIE++SSR VTFSKRRNGLIKKA EL +LCDV++ ++ FS GG+LYEF S GR
Sbjct: 4 KKVELKRIENKSSRQVTFSKRRNGLIKKAHELSVLCDVQVALLTFSNGGKLYEFSSVGR 62
>gb|AGC94569.1| flowering locus C [Betula platyphylla]
Length = 208
Score = 88.6 bits (218), Expect = 1e-15
Identities = 41/56 (73%), Positives = 51/56 (91%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCS 226
+KV +KRIED+SSR VTFSKRRNGL+KKAREL ILCDV++ +IVFS+ G+LYE+CS
Sbjct: 4 KKVLLKRIEDKSSRQVTFSKRRNGLMKKARELSILCDVQVALIVFSSRGKLYEYCS 59
>emb|CCO61905.1| FLC-like, partial [Cichorium intybus]
Length = 207
Score = 88.2 bits (217), Expect = 2e-15
Identities = 44/76 (57%), Positives = 56/76 (73%), Gaps = 9/76 (11%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSS--- 229
RK+E+KRIE++SSR VTFSKRR GLI+KAR+L +LCD ++ VIVFS GG+LYEFC+
Sbjct: 1 RKLEIKRIENKSSRLVTFSKRRTGLIEKARQLSLLCDADVAVIVFSAGGKLYEFCNGSTN 60
Query: 230 ------GRSEKACTVG 259
R EK+C G
Sbjct: 61 SMENLLSRYEKSCLQG 76
>ref|NP_001268057.1| flowering locus C [Vitis vinifera] gi|269116066|gb|ACZ26524.1|
flowering locus C [Vitis vinifera]
Length = 210
Score = 88.2 bits (217), Expect = 2e-15
Identities = 40/56 (71%), Positives = 51/56 (91%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCS 226
+KVE+KRIED+SSR VTFSKRRNGLIKKAREL +LCDV++ V+VFS+ G+LYE+ +
Sbjct: 4 KKVELKRIEDKSSRQVTFSKRRNGLIKKARELSVLCDVDVAVLVFSSRGKLYEYAN 59
>gb|AFO10123.1| MADS-box domain protein [Camellia sinensis]
Length = 237
Score = 87.8 bits (216), Expect = 2e-15
Identities = 42/61 (68%), Positives = 50/61 (81%)
Frame = +2
Query: 62 KVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSSGRSE 241
KV++KRIED++SR VTFSKRR GLIKKAREL ILCDVEI +IVFS G+LY+FC+
Sbjct: 5 KVQLKRIEDKNSRQVTFSKRRTGLIKKARELSILCDVEIALIVFSARGKLYQFCTGDSLR 64
Query: 242 K 244
K
Sbjct: 65 K 65
>gb|EPS71515.1| hypothetical protein M569_03244 [Genlisea aurea]
Length = 178
Score = 87.4 bits (215), Expect = 3e-15
Identities = 36/59 (61%), Positives = 52/59 (88%)
Frame = +2
Query: 59 RKVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSSGR 235
+K+E+KRIED+S+R TF+KRRNGL+KKA+EL +LCDV++GVI+FST G+ Y +C++ R
Sbjct: 4 KKLEIKRIEDKSARQATFTKRRNGLLKKAKELSVLCDVDVGVIIFSTRGKFYHYCNTSR 62
>gb|AFX72878.1| MADS-box protein SEP2B [Aquilegia coerulea]
Length = 85
Score = 87.0 bits (214), Expect = 3e-15
Identities = 39/74 (52%), Positives = 56/74 (75%)
Frame = +2
Query: 62 KVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSSGRSE 241
KVE+KRIE++ +R VTF+KRRNGL+KKA EL +LCD E+ +I+FST G+LYEFCS+ R
Sbjct: 5 KVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCSTSRYS 64
Query: 242 KACTVGYSVFFFVI 283
+ + ++ F +
Sbjct: 65 TSSYIYIYIYSFFL 78
>gb|ACF85469.1| unknown [Zea mays] gi|413949237|gb|AFW81886.1| putative MADS-box
transcription factor family protein isoform 1 [Zea mays]
gi|413949238|gb|AFW81887.1| putative MADS-box
transcription factor family protein isoform 2 [Zea mays]
Length = 103
Score = 87.0 bits (214), Expect = 3e-15
Identities = 37/63 (58%), Positives = 52/63 (82%)
Frame = +2
Query: 62 KVEMKRIEDRSSRHVTFSKRRNGLIKKARELPILCDVEIGVIVFSTGGRLYEFCSSGRSE 241
K+E+KRIE+ ++R VTFSKRR GL+KKARE+ +LCD E+GV++FS+GG+LY++CS S
Sbjct: 5 KIEIKRIENSTNRQVTFSKRRAGLVKKAREIGVLCDAEVGVVIFSSGGKLYDYCSPRTSS 64
Query: 242 KAC 250
C
Sbjct: 65 VHC 67