BLASTX nr result

ID: Jatropha_contig00012496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00012496
         (198 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x P...    84   2e-14
gb|ERP64643.1| zinc finger family protein [Populus trichocarpa]        82   5e-14
ref|XP_002328624.1| predicted protein [Populus trichocarpa]            82   5e-14
ref|XP_002516957.1| ring finger protein, putative [Ricinus commu...    80   3e-13
gb|EEF01679.2| hypothetical protein POPTR_0010s01400g [Populus t...    75   1e-11
ref|XP_002315508.1| predicted protein [Populus trichocarpa]            75   1e-11
ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like ...    68   1e-09
ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like ...    68   1e-09

>gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x Populus alba]
          Length = 293

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 40/62 (64%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
 Frame = +3

Query: 9   SGLCATCQHNEDHVG-ASNSSYGGRRKPAELLGVTIEVPRRNGNFEDESAIESPEYQVAY 185
           SGLC +CQH EDH+G AS SS+ G RKP  L+GVTI+VPRRNGNFEDES  ESP    ++
Sbjct: 177 SGLCTSCQHEEDHLGSASTSSFNGGRKPVGLIGVTIDVPRRNGNFEDESNTESPSASHSF 236

Query: 186 ES 191
            S
Sbjct: 237 RS 238


>gb|ERP64643.1| zinc finger family protein [Populus trichocarpa]
          Length = 293

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 40/62 (64%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
 Frame = +3

Query: 9   SGLCATCQHNEDHVG-ASNSSYGGRRKPAELLGVTIEVPRRNGNFEDESAIESPEYQVAY 185
           SGLC +CQH EDHVG AS SS+   RKP  L+GVTI+VPRRNGNFEDES  ESP    ++
Sbjct: 177 SGLCTSCQHEEDHVGSASTSSFNDGRKPVGLIGVTIDVPRRNGNFEDESNTESPSASHSF 236

Query: 186 ES 191
            S
Sbjct: 237 RS 238


>ref|XP_002328624.1| predicted protein [Populus trichocarpa]
          Length = 293

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 40/62 (64%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
 Frame = +3

Query: 9   SGLCATCQHNEDHVG-ASNSSYGGRRKPAELLGVTIEVPRRNGNFEDESAIESPEYQVAY 185
           SGLC +CQH EDHVG AS SS+   RKP  L+GVTI+VPRRNGNFEDES  ESP    ++
Sbjct: 177 SGLCTSCQHEEDHVGSASTSSFNDGRKPVGLIGVTIDVPRRNGNFEDESNTESPSASHSF 236

Query: 186 ES 191
            S
Sbjct: 237 RS 238


>ref|XP_002516957.1| ring finger protein, putative [Ricinus communis]
           gi|223544045|gb|EEF45571.1| ring finger protein,
           putative [Ricinus communis]
          Length = 292

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 40/57 (70%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
 Frame = +3

Query: 3   SDSGLCATCQHNEDHVG--ASNSSYGGRRKPAELLGVTIEVPRRNGNFEDESAIESP 167
           S +GLC TCQH E+ V   AS SS+ GRRKPAE +GVTIEVPRRNG FEDE A ESP
Sbjct: 175 SRAGLCVTCQHEENRVDGVASTSSFNGRRKPAEFVGVTIEVPRRNGVFEDEPATESP 231


>gb|EEF01679.2| hypothetical protein POPTR_0010s01400g [Populus trichocarpa]
          Length = 291

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 40/64 (62%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   SDSGLCATCQHNEDHVG-ASNSSYGGRRKPAELLGVTIEVPRRNGNFEDESAIESPEYQV 179
           S S     CQH ED VG AS SS+  RRK  EL+GVTIEVPRRNGNFEDES  ESP    
Sbjct: 177 SGSSSGTMCQHEEDRVGSASTSSFNDRRKQMELIGVTIEVPRRNGNFEDESNTESPSASH 236

Query: 180 AYES 191
           A+ S
Sbjct: 237 AFRS 240


>ref|XP_002315508.1| predicted protein [Populus trichocarpa]
          Length = 273

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 40/64 (62%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   SDSGLCATCQHNEDHVG-ASNSSYGGRRKPAELLGVTIEVPRRNGNFEDESAIESPEYQV 179
           S S     CQH ED VG AS SS+  RRK  EL+GVTIEVPRRNGNFEDES  ESP    
Sbjct: 162 SGSSSGTMCQHEEDRVGSASTSSFNDRRKQMELIGVTIEVPRRNGNFEDESNTESPSASH 221

Query: 180 AYES 191
           A+ S
Sbjct: 222 AFRS 225


>ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 2 [Vitis
           vinifera]
          Length = 320

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 10/69 (14%)
 Frame = +3

Query: 3   SDSGLCATCQHNEDHVG-------ASNSSYGGRRKPAELLGVTIEVPRRNGNF---EDES 152
           S S LC+TCQH+ED  G         +SS G RRK +EL GV+IEVPRRN NF   EDES
Sbjct: 187 STSALCSTCQHDEDRTGRLRTSSSVGSSSVGSRRKSSELAGVSIEVPRRNENFGLSEDES 246

Query: 153 AIESPEYQV 179
            ++SP  +V
Sbjct: 247 LLDSPATRV 255


>ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 1 [Vitis
           vinifera]
          Length = 317

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 10/69 (14%)
 Frame = +3

Query: 3   SDSGLCATCQHNEDHVG-------ASNSSYGGRRKPAELLGVTIEVPRRNGNF---EDES 152
           S S LC+TCQH+ED  G         +SS G RRK +EL GV+IEVPRRN NF   EDES
Sbjct: 184 STSALCSTCQHDEDRTGRLRTSSSVGSSSVGSRRKSSELAGVSIEVPRRNENFGLSEDES 243

Query: 153 AIESPEYQV 179
            ++SP  +V
Sbjct: 244 LLDSPATRV 252


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