BLASTX nr result
ID: Jatropha_contig00012422
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00012422
(403 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62495.1| hypothetical protein VITISV_027483 [Vitis vinifera] 74 2e-16
emb|CAN81063.1| hypothetical protein VITISV_000726 [Vitis vinifera] 75 3e-16
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata] 70 6e-16
emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum] 65 1e-15
emb|CAN77422.1| hypothetical protein VITISV_032393 [Vitis vinifera] 74 1e-15
emb|CAN73619.1| hypothetical protein VITISV_012052 [Vitis vinifera] 74 1e-15
emb|CAN65508.1| hypothetical protein VITISV_025572 [Vitis vinifera] 73 2e-15
emb|CAN64323.1| hypothetical protein VITISV_022768 [Vitis vinifera] 73 2e-15
emb|CAN64574.1| hypothetical protein VITISV_003431 [Vitis vinifera] 75 2e-15
emb|CAN82984.1| hypothetical protein VITISV_030339 [Vitis vinifera] 75 2e-15
emb|CAN74304.1| hypothetical protein VITISV_013003 [Vitis vinifera] 73 2e-15
gb|AAK53857.1|AC016781_11 Putative retroelement [Oryza sativa Ja... 69 2e-15
emb|CAN81948.1| hypothetical protein VITISV_024472 [Vitis vinifera] 74 2e-15
emb|CAN61713.1| hypothetical protein VITISV_034504 [Vitis vinifera] 73 3e-15
ref|XP_004296026.1| PREDICTED: uncharacterized protein LOC101306... 66 3e-15
gb|ABF95742.1| retrotransposon protein, putative, unclassified [... 70 4e-15
gb|AAU90208.1| putative polyprotein [Oryza sativa Japonica Group] 68 4e-15
gb|ABA99910.2| retrotransposon protein, putative, unclassified [... 70 4e-15
gb|AAU90115.1| putative polyprotein [Oryza sativa Japonica Group] 64 4e-15
gb|ABA97831.1| retrotransposon protein, putative, Ty3-gypsy subc... 66 4e-15
>emb|CAN62495.1| hypothetical protein VITISV_027483 [Vitis vinifera]
Length = 927
Score = 74.3 bits (181), Expect(2) = 2e-16
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = -1
Query: 403 VLFR*EISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DI 224
++ R I ++ DNG QF +AFR+FCS+ NI + + +P +NG E TN+T++ +
Sbjct: 697 IICRFGIPQTIIADNGPQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAETTNKTLITAL 756
Query: 223 KKRLE-VGSSWTEELNNVLRPYRTTPR 146
KKR E W EEL +VL YRTTPR
Sbjct: 757 KKRFEQAKGKWVEELPDVLWAYRTTPR 783
Score = 36.6 bits (83), Expect(2) = 2e-16
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = -3
Query: 128 TPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLD 6
TPF+L YG+++VIP EIG+ + RI + D + L +LD
Sbjct: 789 TPFALAYGMDIVIPTEIGLPTIRIEAGKQDDANAELGRNLD 829
>emb|CAN81063.1| hypothetical protein VITISV_000726 [Vitis vinifera]
Length = 928
Score = 74.7 bits (182), Expect(2) = 3e-16
Identities = 37/77 (48%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = -1
Query: 373 LVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DIKKRLE-VGSS 197
+++DNG QF +AFR+FCS+ NI + + +P +NG E TN+T++ +KKRLE
Sbjct: 732 IISDNGPQFDSIAFRNFCSELNIQNSYSTPRYPQSNGQAEATNKTLITALKKRLEQAKGK 791
Query: 196 WTEELNNVLRPYRTTPR 146
W EEL VL YRTTPR
Sbjct: 792 WVEELPGVLWAYRTTPR 808
Score = 35.8 bits (81), Expect(2) = 3e-16
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = -3
Query: 128 TPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLD 6
TPF+L YG++ +IP EIG+ + R + D + LR +LD
Sbjct: 814 TPFALAYGMDAIIPTEIGLPTIRTEAGKQDDANAELRRNLD 854
>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
Length = 1103
Score = 70.5 bits (171), Expect(2) = 6e-16
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = -1
Query: 403 VLFR*EISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DI 224
++ R + +VTDNG QF F FC+DW I + + + +P NG E N+TIL ++
Sbjct: 871 IICRHGVPYEIVTDNGPQFISHEFDAFCADWGIKVSYSTPRYPQGNGQAEAANKTILSNL 930
Query: 223 KKRL-EVGSSWTEELNNVLRPYRTTPR 146
KKRL + W EEL VL YRTTPR
Sbjct: 931 KKRLNHLKGGWYEELQPVLWAYRTTPR 957
Score = 38.9 bits (89), Expect(2) = 6e-16
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = -3
Query: 131 ETPFSLVYGVEVVIPLEIGM--LSRRI*SYNDDHNSETLRVDLD 6
ETPFSLVYG+E V+P E+ + L R N++ NS L LD
Sbjct: 962 ETPFSLVYGMEAVVPAELNVPGLRRTEAPLNEEENSAMLNDSLD 1005
>emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]
Length = 1455
Score = 65.5 bits (158), Expect(2) = 1e-15
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = -1
Query: 373 LVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DIKKRL-EVGSS 197
LV+DNG QF +C W I F SV +P +NG +EVTNRT++ +K RL
Sbjct: 1319 LVSDNGIQFTSDQLSKWCDHWKIQHRFTSVGYPQSNGQVEVTNRTLIQGLKARLMTYQGK 1378
Query: 196 WTEELNNVLRPYRTTPRSS 140
W EE+ ++L YRTT R+S
Sbjct: 1379 WVEEIPSLLWAYRTTARAS 1397
Score = 43.1 bits (100), Expect(2) = 1e-15
Identities = 23/43 (53%), Positives = 27/43 (62%)
Frame = -3
Query: 131 ETPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLDL 3
ETPFSL YG E VI EI S RI YN+ N E + ++LDL
Sbjct: 1400 ETPFSLAYGHEAVILAEISTSSCRIQEYNEGRNKEHVILELDL 1442
>emb|CAN77422.1| hypothetical protein VITISV_032393 [Vitis vinifera]
Length = 987
Score = 73.9 bits (180), Expect(2) = 1e-15
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = -1
Query: 403 VLFR*EISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DI 224
++ R I ++TDNG QF + FR+FCS+ NI + + +P +NG E TN+T++ +
Sbjct: 797 IICRFGIPQTIITDNGPQFDSITFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLINAL 856
Query: 223 KKRLEVGSS-WTEELNNVLRPYRTTP 149
KKRLE W EEL VL YRTTP
Sbjct: 857 KKRLEQAKGRWVEELPGVLWAYRTTP 882
Score = 34.7 bits (78), Expect(2) = 1e-15
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -3
Query: 128 TPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLD 6
TPF+L YG++ VIP EIG+ + R + D S L +LD
Sbjct: 889 TPFALAYGMDAVIPTEIGLPTIRTDAAKQDDVSTELGRNLD 929
>emb|CAN73619.1| hypothetical protein VITISV_012052 [Vitis vinifera]
Length = 219
Score = 74.3 bits (181), Expect(2) = 1e-15
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = -1
Query: 388 EISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DIKKRLE 209
EI ++ DNG QF +AFR+FCS+ NI + + +P +NG E TN+T++ +KKRLE
Sbjct: 63 EIPQTIIADNGPQFDSIAFRNFCSELNIRNSYSTPHYPQSNGKAEATNKTLITALKKRLE 122
Query: 208 -VGSSWTEELNNVLRPYRTTP 149
W EEL VL YRTTP
Sbjct: 123 QAKGKWVEELPGVLWAYRTTP 143
Score = 34.3 bits (77), Expect(2) = 1e-15
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 128 TPFSLVYGVEVVIPLEIGMLS-RRI*SYNDDHNSE 27
TPFSL YG++ VIP EIG+ + R + DD N+E
Sbjct: 150 TPFSLAYGMDAVIPTEIGLPTIRTEAAKQDDANTE 184
>emb|CAN65508.1| hypothetical protein VITISV_025572 [Vitis vinifera]
Length = 992
Score = 72.8 bits (177), Expect(2) = 2e-15
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = -1
Query: 403 VLFR*EISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DI 224
++ R I ++ DNG QF +AF +FCS+ NI + + +P +NG +E TN+T++ +
Sbjct: 762 IVCRFXIPQTIIADNGPQFDSIAFXNFCSELNIRNSYSTPRYPQSNGQVEATNKTLINAL 821
Query: 223 KKRLE-VGSSWTEELNNVLRPYRTTP 149
KKRLE W EEL VL YRTTP
Sbjct: 822 KKRLEQAKGKWVEELPGVLWAYRTTP 847
Score = 35.0 bits (79), Expect(2) = 2e-15
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -3
Query: 128 TPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLD 6
TPF+L YG++ VIP EIG+ + R + D S L +LD
Sbjct: 854 TPFALTYGMDAVIPTEIGLPTIRTDAAKQDDASAELGRNLD 894
>emb|CAN64323.1| hypothetical protein VITISV_022768 [Vitis vinifera]
Length = 952
Score = 73.2 bits (178), Expect(2) = 2e-15
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = -1
Query: 403 VLFR*EISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DI 224
++ R I ++ DNG QF +AFR+FCS+ NI + + +P +NG E TN+T++ +
Sbjct: 726 IICRFGIPQTIIADNGPQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLITAL 785
Query: 223 KKRLE-VGSSWTEELNNVLRPYRTTP 149
KKRLE W EEL VL YRTTP
Sbjct: 786 KKRLEQAKGKWVEELLGVLWAYRTTP 811
Score = 34.7 bits (78), Expect(2) = 2e-15
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = -3
Query: 128 TPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLD 6
TPF+L YG++ ++P EIG+ + RI + D + L +LD
Sbjct: 818 TPFALAYGMDAIVPTEIGLPTIRIEAGKQDDANAELGRNLD 858
>emb|CAN64574.1| hypothetical protein VITISV_003431 [Vitis vinifera]
Length = 943
Score = 75.1 bits (183), Expect(2) = 2e-15
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = -1
Query: 403 VLFR*EISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DI 224
++ R I ++TDNG QF +AFR+FCS+ NI + + +P +NG E TN+T++ +
Sbjct: 751 IVCRFGIPQTIITDNGPQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLITAL 810
Query: 223 KKRLE-VGSSWTEELNNVLRPYRTTP 149
KKRLE W EEL VL YRTTP
Sbjct: 811 KKRLEQAKGKWVEELPGVLWAYRTTP 836
Score = 32.7 bits (73), Expect(2) = 2e-15
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = -3
Query: 128 TPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLD 6
TPF+L YG+ VIP EIG+ + R + D + L +LD
Sbjct: 843 TPFALAYGMNAVIPTEIGLPTIRTETTKKDDANAELGRNLD 883
>emb|CAN82984.1| hypothetical protein VITISV_030339 [Vitis vinifera]
Length = 939
Score = 75.5 bits (184), Expect(2) = 2e-15
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = -1
Query: 403 VLFR*EISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DI 224
++ R I ++ DNG QF +AFR+FCSD NI + + +P +NG E TN+T++ +
Sbjct: 725 IICRFGIPQTIIADNGPQFDSIAFRNFCSDLNIRNSYSTPRYPQSNGQAEATNKTLIIAL 784
Query: 223 KKRLE-VGSSWTEELNNVLRPYRTTP 149
KKRLE W EEL +VL YRTTP
Sbjct: 785 KKRLEQAKGKWVEELPSVLWAYRTTP 810
Score = 32.3 bits (72), Expect(2) = 2e-15
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -3
Query: 128 TPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRV 15
TPF+L YG++ VIP EIG+ + R + S +R+
Sbjct: 817 TPFALAYGMDAVIPTEIGLPTIRTDAAKQMRESAAIRM 854
>emb|CAN74304.1| hypothetical protein VITISV_013003 [Vitis vinifera]
Length = 894
Score = 72.8 bits (177), Expect(2) = 2e-15
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = -1
Query: 403 VLFR*EISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DI 224
++ R I ++ DNG QF +AFR+FCS+ NI + + +P +NG E TN+T++ +
Sbjct: 734 IVCRFGIPHTIIADNGPQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLITAL 793
Query: 223 KKRLE-VGSSWTEELNNVLRPYRTTP 149
KKRLE W EEL VL YRTTP
Sbjct: 794 KKRLEQAKGKWVEELPGVLWAYRTTP 819
Score = 35.0 bits (79), Expect(2) = 2e-15
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = -3
Query: 128 TPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLD 6
TPF+L YG+ VIP EIG+ + R + D S L +LD
Sbjct: 826 TPFALAYGMNAVIPTEIGLPTIRTEAVKQDDASTVLGRNLD 866
>gb|AAK53857.1|AC016781_11 Putative retroelement [Oryza sativa Japonica Group]
gi|108709345|gb|ABF97140.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1541
Score = 68.9 bits (167), Expect(2) = 2e-15
Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = -1
Query: 385 ISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DIKKRL-- 212
+ +R++TDNG QF F D+C D I L F S AHP +NG +E TN IL +K +
Sbjct: 1316 VPNRIITDNGTQFTSELFGDYCEDMGIKLCFASPAHPRSNGQVERTNAEILKGLKTKTFN 1375
Query: 211 ---EVGSSWTEELNNVLRPYRTTP 149
+ G SW EEL VLR RT P
Sbjct: 1376 ILKKHGDSWIEELPAVLRANRTMP 1399
Score = 38.5 bits (88), Expect(2) = 2e-15
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = -3
Query: 131 ETPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLD 6
ETPF LVYG E V+P E+ + S R+ Y + + R DLD
Sbjct: 1405 ETPFFLVYGAEAVLPSELTLRSPRVTMYCEADQDQLRRDDLD 1446
>emb|CAN81948.1| hypothetical protein VITISV_024472 [Vitis vinifera]
Length = 948
Score = 73.6 bits (179), Expect(2) = 2e-15
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = -1
Query: 403 VLFR*EISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DI 224
++ R I +V DNG QF +AFR+FCS+ NI + + +P +NG E TN+T++ +
Sbjct: 747 IVCRFGIPQTIVADNGPQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLITAL 806
Query: 223 KKRLE-VGSSWTEELNNVLRPYRTTP 149
KKRLE W EEL VL YRTTP
Sbjct: 807 KKRLEQAKGKWVEELPGVLWAYRTTP 832
Score = 33.9 bits (76), Expect(2) = 2e-15
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -3
Query: 128 TPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLD 6
TPF+L YG++ VIP EIG+ + R + D + L +LD
Sbjct: 839 TPFALAYGMDAVIPTEIGLPTIRTEAAKQDDANTELGRNLD 879
>emb|CAN61713.1| hypothetical protein VITISV_034504 [Vitis vinifera]
Length = 1027
Score = 72.8 bits (177), Expect(2) = 3e-15
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = -1
Query: 403 VLFR*EISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DI 224
++ R I ++ DNG QF +AFR+FCS+ NI + + +P +NG E TN+T++ +
Sbjct: 797 IVCRFGIPQTIIADNGLQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLITAL 856
Query: 223 KKRLE-VGSSWTEELNNVLRPYRTTP 149
KKRLE W EEL VL YRTTP
Sbjct: 857 KKRLEQAKGKWVEELPGVLWAYRTTP 882
Score = 34.3 bits (77), Expect(2) = 3e-15
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = -3
Query: 128 TPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLD 6
TPF+L YG++ +IP EIG+ + R + D+ S + +LD
Sbjct: 889 TPFALAYGMDAIIPTEIGLPTIRTEAVKQDNASVEVGRNLD 929
>ref|XP_004296026.1| PREDICTED: uncharacterized protein LOC101306711 [Fragaria vesca
subsp. vesca]
Length = 520
Score = 65.9 bits (159), Expect(2) = 3e-15
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = -1
Query: 385 ISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DIKKRLE- 209
+ ++TDNG QF FR+F S+ ++++ S AHP TNG +E N+ I ++KKRLE
Sbjct: 301 VPQAIITDNGAQFDNETFREFLSEQGTTIFYASPAHPQTNGQVEAINKLIKQNLKKRLED 360
Query: 208 VGSSWTEELNNVLRPYRTTP 149
V W +L VL RTTP
Sbjct: 361 VKGLWAAKLLKVLWTLRTTP 380
Score = 41.2 bits (95), Expect(2) = 3e-15
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = -3
Query: 131 ETPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLDL 3
E+P+ L YG E VIP+E+ + S R+ +Y+ + N+ LR+++DL
Sbjct: 386 ESPYLLSYGTEAVIPVEMEVPSERVTTYDPETNTTGLRLNMDL 428
>gb|ABF95742.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1926
Score = 69.7 bits (169), Expect(2) = 4e-15
Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = -1
Query: 385 ISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DIKKRL-- 212
+ +R++TDNG QF F D+C D I LYF S AHP +NG +E N IL +K +
Sbjct: 1701 VPNRIITDNGTQFTSELFGDYCEDMGIKLYFASPAHPRSNGQVERANAEILKGLKTKTFN 1760
Query: 211 ---EVGSSWTEELNNVLRPYRTTP 149
+ G SW EEL VL RTTP
Sbjct: 1761 ILKKHGDSWIEELPAVLWANRTTP 1784
Score = 37.0 bits (84), Expect(2) = 4e-15
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = -3
Query: 131 ETPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLD 6
ETPF LVYG E V+P E+ + S R Y + + R DLD
Sbjct: 1790 ETPFFLVYGAEAVLPSELTLRSPRATMYCEADQDQLRRDDLD 1831
>gb|AAU90208.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1862
Score = 68.2 bits (165), Expect(2) = 4e-15
Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = -1
Query: 385 ISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DIKKRL-- 212
+ +R++TDNG QF F D+C D I L F S AHP +NG +E TN IL +K +
Sbjct: 1637 VPNRIITDNGTQFTSELFGDYCEDMGIKLCFASPAHPRSNGQVERTNAEILKGLKTKTFN 1696
Query: 211 ---EVGSSWTEELNNVLRPYRTTP 149
+ G SW EEL VL RTTP
Sbjct: 1697 ILKKHGDSWIEELPAVLWANRTTP 1720
Score = 38.5 bits (88), Expect(2) = 4e-15
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = -3
Query: 131 ETPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLD 6
ETPF LVYG E V+P E+ + S R+ Y + + R DLD
Sbjct: 1726 ETPFFLVYGAEAVLPSELTLRSPRVTMYCEADQDQLRRDDLD 1767
>gb|ABA99910.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1757
Score = 69.7 bits (169), Expect(2) = 4e-15
Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = -1
Query: 385 ISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DIKKRL-- 212
+ +R++TDNG QF F D+C D I LYF S AHP +NG +E N IL +K +
Sbjct: 1532 VPNRIITDNGTQFTSELFGDYCEDMGIKLYFASPAHPRSNGQVERANAEILKGLKTKTFN 1591
Query: 211 ---EVGSSWTEELNNVLRPYRTTP 149
+ G SW EEL VL RTTP
Sbjct: 1592 ILKKHGDSWIEELPAVLWANRTTP 1615
Score = 37.0 bits (84), Expect(2) = 4e-15
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -3
Query: 131 ETPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLD 6
ETPF LVYG + V+P E+ + S R+ Y + + R DLD
Sbjct: 1621 ETPFFLVYGAKAVLPSELTLRSPRVTMYCEADQGQLRRDDLD 1662
>gb|AAU90115.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1626
Score = 63.9 bits (154), Expect(2) = 4e-15
Identities = 36/80 (45%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = -1
Query: 373 LVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DIKKRL-----E 209
++TDNG QF F D+C D I L F S AHP +NG +E N IL +K + +
Sbjct: 1405 IITDNGTQFTSELFGDYCDDMGIKLCFASPAHPKSNGQVERANAEILKGLKTKTYNVLKK 1464
Query: 208 VGSSWTEELNNVLRPYRTTP 149
G SW EEL VL RTTP
Sbjct: 1465 HGDSWLEELPTVLWENRTTP 1484
Score = 42.7 bits (99), Expect(2) = 4e-15
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = -3
Query: 131 ETPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLD 6
ETPF LVYG E V+P E+ + S R+ YN+ + + R DLD
Sbjct: 1490 ETPFFLVYGAEAVLPSELSLGSPRVVLYNEANQDDLCRDDLD 1531
>gb|ABA97831.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1564
Score = 65.9 bits (159), Expect(2) = 4e-15
Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Frame = -1
Query: 385 ISSRLVTDNGKQFHYVAFRDFCSDWNISLYFISVAHP*TNGLIEVTNRTIL*DIKKRL-- 212
+ +R++TDNG QF F D+C D I L F S AHP +NG +E N IL +K +
Sbjct: 1339 VPNRIITDNGTQFTSELFGDYCDDMGIKLCFASPAHPKSNGQVERANAEILKGLKTKTYN 1398
Query: 211 ---EVGSSWTEELNNVLRPYRTTP 149
G SW EEL VL RTTP
Sbjct: 1399 VLKRHGDSWLEELPAVLWANRTTP 1422
Score = 40.8 bits (94), Expect(2) = 4e-15
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = -3
Query: 131 ETPFSLVYGVEVVIPLEIGMLSRRI*SYNDDHNSETLRVDLD 6
ETPF LVYG E V+P E+ + S R+ Y++ + + R DLD
Sbjct: 1428 ETPFFLVYGAEAVLPSELSLGSPRVTLYSETNQDDLRRDDLD 1469