BLASTX nr result
ID: Jatropha_contig00012378
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00012378
(599 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co... 183 3e-44
gb|EMJ09915.1| hypothetical protein PRUPE_ppa023324mg, partial [... 179 6e-43
ref|XP_004296139.1| PREDICTED: uncharacterized protein LOC101297... 178 8e-43
gb|EEE83010.2| hypothetical protein POPTR_0001s21210g [Populus t... 174 2e-41
ref|XP_002298205.1| predicted protein [Populus trichocarpa] 174 2e-41
gb|EMJ09336.1| hypothetical protein PRUPE_ppa000277mg [Prunus pe... 173 3e-41
gb|ESR40737.1| hypothetical protein CICLE_v10024717mg [Citrus cl... 167 2e-39
gb|ESR40736.1| hypothetical protein CICLE_v10024717mg [Citrus cl... 167 2e-39
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata] 167 2e-39
emb|CBI40659.3| unnamed protein product [Vitis vinifera] 164 2e-38
ref|XP_004486632.1| PREDICTED: mediator of RNA polymerase II tra... 164 2e-38
ref|XP_003597955.1| hypothetical protein MTR_2g104400 [Medicago ... 164 2e-38
ref|XP_003634891.1| PREDICTED: uncharacterized protein LOC100853... 161 1e-37
gb|ERP63068.1| hypothetical protein POPTR_0003s02320g [Populus t... 160 3e-37
gb|ERP48277.1| hypothetical protein POPTR_0027s00370g [Populus t... 159 4e-37
gb|ERP48285.1| hypothetical protein POPTR_0027s00430g [Populus t... 159 5e-37
gb|ERP48284.1| hypothetical protein POPTR_0027s00430g [Populus t... 159 5e-37
gb|ERP48283.1| hypothetical protein POPTR_0027s00430g [Populus t... 159 5e-37
ref|XP_004486633.1| PREDICTED: uncharacterized protein LOC101503... 157 2e-36
ref|XP_006359328.1| PREDICTED: mediator of RNA polymerase II tra... 157 3e-36
>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
gi|223530005|gb|EEF31930.1| transcription cofactor,
putative [Ricinus communis]
Length = 1382
Score = 183 bits (465), Expect = 3e-44
Identities = 89/106 (83%), Positives = 95/106 (89%)
Frame = +1
Query: 43 RGAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYT 222
+G EP +D GDWRA LQPDSRQRIVNKIMETLKRHLPFS QEGLEELKKIAVRFEEKIYT
Sbjct: 11 QGGEPAVDTGDWRATLQPDSRQRIVNKIMETLKRHLPFSGQEGLEELKKIAVRFEEKIYT 70
Query: 223 AAASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPG 360
AA SQ DYLRKISLKMLTMESKS+N +PNS+PPN GN+NR PDPG
Sbjct: 71 AATSQSDYLRKISLKMLTMESKSQNNVPNSVPPNPFGNNNRPPDPG 116
>gb|EMJ09915.1| hypothetical protein PRUPE_ppa023324mg, partial [Prunus persica]
Length = 634
Score = 179 bits (453), Expect = 6e-43
Identities = 90/116 (77%), Positives = 97/116 (83%)
Frame = +1
Query: 13 WYQPQSGHYGRGAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKI 192
W PQ G E MDAGDWR+QLQPDSRQRIVNKIM+TLKRHLPFS EGL+ELKKI
Sbjct: 6 WRPPQVG------EAPMDAGDWRSQLQPDSRQRIVNKIMDTLKRHLPFSGHEGLQELKKI 59
Query: 193 AVRFEEKIYTAAASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPG 360
AVRFEEKIYTAA SQ DYLRKISLKMLTME+KS+N MPNSL N++GNSNR PDPG
Sbjct: 60 AVRFEEKIYTAATSQSDYLRKISLKMLTMETKSQNTMPNSLESNSAGNSNRPPDPG 115
>ref|XP_004296139.1| PREDICTED: uncharacterized protein LOC101297525 [Fragaria vesca
subsp. vesca]
Length = 2234
Score = 178 bits (452), Expect = 8e-43
Identities = 88/104 (84%), Positives = 93/104 (89%)
Frame = +1
Query: 46 GAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYTA 225
G EP MDAGDWR+QLQ DSRQRIVNKIM+TLKRHLPFS QEGL ELKKIAVRFEEKIYTA
Sbjct: 897 GGEPAMDAGDWRSQLQADSRQRIVNKIMDTLKRHLPFSGQEGLHELKKIAVRFEEKIYTA 956
Query: 226 AASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDP 357
A SQ DYLRKISLKMLTMESKS+N M NSLP N++GNSNR PDP
Sbjct: 957 ATSQSDYLRKISLKMLTMESKSQNTMGNSLPSNSAGNSNRPPDP 1000
Score = 146 bits (368), Expect = 4e-33
Identities = 75/107 (70%), Positives = 83/107 (77%)
Frame = +1
Query: 31 GHYGRGAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEE 210
G+ G EP MD GDWR QLQ DSR+RIVNKI TLKRHLP S QEGL ELKKIAVRFEE
Sbjct: 6 GNPSLGGEPAMDTGDWRCQLQADSRERIVNKISGTLKRHLPLSGQEGLVELKKIAVRFEE 65
Query: 211 KIYTAAASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAP 351
KIY AA SQ DYLRKISLKMLTME+KS N + +SL N++G+S P
Sbjct: 66 KIYAAATSQSDYLRKISLKMLTMEAKSPNTVTSSLQSNSAGSSVMQP 112
>gb|EEE83010.2| hypothetical protein POPTR_0001s21210g [Populus trichocarpa]
Length = 540
Score = 174 bits (441), Expect = 2e-41
Identities = 83/105 (79%), Positives = 93/105 (88%)
Frame = +1
Query: 46 GAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYTA 225
G EP MD GDWR QLQPD+RQRIVNKIMETLKRHLPFS QEGL+ELKKIAVRFEEKIYTA
Sbjct: 12 GGEPVMDTGDWRTQLQPDARQRIVNKIMETLKRHLPFSGQEGLQELKKIAVRFEEKIYTA 71
Query: 226 AASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPG 360
A SQ DYLRKISLKML ME+KS++ +PNSLPPN++G+ N+ DPG
Sbjct: 72 ATSQSDYLRKISLKMLAMENKSQSTIPNSLPPNSTGSGNKPLDPG 116
>ref|XP_002298205.1| predicted protein [Populus trichocarpa]
Length = 123
Score = 174 bits (441), Expect = 2e-41
Identities = 83/105 (79%), Positives = 93/105 (88%)
Frame = +1
Query: 46 GAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYTA 225
G EP MD GDWR QLQPD+RQRIVNKIMETLKRHLPFS QEGL+ELKKIAVRFEEKIYTA
Sbjct: 12 GGEPVMDTGDWRTQLQPDARQRIVNKIMETLKRHLPFSGQEGLQELKKIAVRFEEKIYTA 71
Query: 226 AASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPG 360
A SQ DYLRKISLKML ME+KS++ +PNSLPPN++G+ N+ DPG
Sbjct: 72 ATSQSDYLRKISLKMLAMENKSQSTIPNSLPPNSTGSGNKPLDPG 116
>gb|EMJ09336.1| hypothetical protein PRUPE_ppa000277mg [Prunus persica]
Length = 1360
Score = 173 bits (439), Expect = 3e-41
Identities = 88/115 (76%), Positives = 95/115 (82%)
Frame = +1
Query: 13 WYQPQSGHYGRGAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKI 192
W PQ G E MDAGDWR+QLQPDSRQRIVNKIM+TLKRHLPFS EGL+ELKKI
Sbjct: 6 WRPPQVG------EAPMDAGDWRSQLQPDSRQRIVNKIMDTLKRHLPFSGHEGLQELKKI 59
Query: 193 AVRFEEKIYTAAASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDP 357
AVRFEEKIYTAA SQ DYLRKISLKMLTME+KS+N M NSL N++GNSNR PDP
Sbjct: 60 AVRFEEKIYTAATSQSDYLRKISLKMLTMETKSQNTMANSLQSNSAGNSNRPPDP 114
>gb|ESR40737.1| hypothetical protein CICLE_v10024717mg [Citrus clementina]
Length = 1369
Score = 167 bits (422), Expect = 2e-39
Identities = 82/103 (79%), Positives = 89/103 (86%)
Frame = +1
Query: 52 EPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYTAAA 231
E +D GDWR QLQPDSRQRIVNKIM+TLKRHLPFS Q+GL ELKKIA RFEEKIYTAA+
Sbjct: 14 ESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAAS 73
Query: 232 SQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPG 360
SQ DYLRKISLKML+MESKS+N MPNSL N G+SNR PDPG
Sbjct: 74 SQSDYLRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPG 116
>gb|ESR40736.1| hypothetical protein CICLE_v10024717mg [Citrus clementina]
Length = 1383
Score = 167 bits (422), Expect = 2e-39
Identities = 82/103 (79%), Positives = 89/103 (86%)
Frame = +1
Query: 52 EPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYTAAA 231
E +D GDWR QLQPDSRQRIVNKIM+TLKRHLPFS Q+GL ELKKIA RFEEKIYTAA+
Sbjct: 14 ESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAAS 73
Query: 232 SQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPG 360
SQ DYLRKISLKML+MESKS+N MPNSL N G+SNR PDPG
Sbjct: 74 SQSDYLRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPG 116
>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
Length = 1405
Score = 167 bits (422), Expect = 2e-39
Identities = 82/103 (79%), Positives = 89/103 (86%)
Frame = +1
Query: 52 EPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYTAAA 231
E +D GDWR QLQPDSRQRIVNKIM+TLKRHLPFS Q+GL ELKKIA RFEEKIYTAA+
Sbjct: 29 ESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAAS 88
Query: 232 SQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPG 360
SQ DYLRKISLKML+MESKS+N MPNSL N G+SNR PDPG
Sbjct: 89 SQSDYLRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPG 131
>emb|CBI40659.3| unnamed protein product [Vitis vinifera]
Length = 114
Score = 164 bits (415), Expect = 2e-38
Identities = 79/103 (76%), Positives = 88/103 (85%)
Frame = +1
Query: 61 MDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYTAAASQP 240
MD GDWR QL PDSRQRIVNKIM+TLKRHLP S QEGL EL+KIAVRFEEKIYTAA SQ
Sbjct: 1 MDGGDWRTQLPPDSRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAVRFEEKIYTAATSQS 60
Query: 241 DYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPGDAK 369
DYLRKISLKMLTME+KS+ MP++LP N++GNS PDPGD +
Sbjct: 61 DYLRKISLKMLTMETKSQTAMPSNLPSNSAGNSKNPPDPGDGE 103
>ref|XP_004486632.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like [Cicer arietinum]
Length = 1313
Score = 164 bits (414), Expect = 2e-38
Identities = 78/106 (73%), Positives = 90/106 (84%)
Frame = +1
Query: 43 RGAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYT 222
+GAEP MD+ DWR QLQP+SRQR+VNKIM+TLKRHLP S QEGL EL+KIA RFEEKI+T
Sbjct: 10 QGAEPNMDSSDWRGQLQPESRQRVVNKIMDTLKRHLPVSGQEGLLELRKIAQRFEEKIFT 69
Query: 223 AAASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPG 360
AA SQPDYLRKISLKMLTME+KS+ M N++P N G SN+ PDPG
Sbjct: 70 AATSQPDYLRKISLKMLTMETKSQGTMANNIPSNQGGPSNKPPDPG 115
>ref|XP_003597955.1| hypothetical protein MTR_2g104400 [Medicago truncatula]
gi|355487003|gb|AES68206.1| hypothetical protein
MTR_2g104400 [Medicago truncatula]
Length = 1289
Score = 164 bits (414), Expect = 2e-38
Identities = 79/106 (74%), Positives = 89/106 (83%)
Frame = +1
Query: 43 RGAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYT 222
+GAEP MD DWR QLQP+SRQRIVNKIM+TLKRHLP S QEGL EL+KIA RFEEKIYT
Sbjct: 10 QGAEPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQRFEEKIYT 69
Query: 223 AAASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPG 360
AA SQ DYLRKISLKMLTME+KS+ + N++PPN G SN+ PDPG
Sbjct: 70 AATSQSDYLRKISLKMLTMETKSQGTISNNIPPNQVGPSNQPPDPG 115
>ref|XP_003634891.1| PREDICTED: uncharacterized protein LOC100853144 [Vitis vinifera]
Length = 170
Score = 161 bits (408), Expect = 1e-37
Identities = 78/100 (78%), Positives = 86/100 (86%)
Frame = +1
Query: 61 MDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYTAAASQP 240
MD GDWR QL PDSRQRIVNKIM+TLKRHLP S QEGL EL+KIAVRFEEKIYTAA SQ
Sbjct: 1 MDGGDWRTQLPPDSRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAVRFEEKIYTAATSQS 60
Query: 241 DYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPG 360
DYLRKISLKMLTME+KS+ MP++LP N++GNS PDPG
Sbjct: 61 DYLRKISLKMLTMETKSQTAMPSNLPSNSAGNSKNPPDPG 100
>gb|ERP63068.1| hypothetical protein POPTR_0003s02320g [Populus trichocarpa]
Length = 1293
Score = 160 bits (404), Expect = 3e-37
Identities = 80/105 (76%), Positives = 87/105 (82%)
Frame = +1
Query: 46 GAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYTA 225
G EP MD GDWR QLQPDSRQRIVNKIMETLKRHLPFS QEGL+ELKKIAVRFEEKIYTA
Sbjct: 12 GGEPVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELKKIAVRFEEKIYTA 71
Query: 226 AASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPG 360
A +Q DYLRKISLKMLTME+KS+N +P +GN N+ DPG
Sbjct: 72 ATNQSDYLRKISLKMLTMETKSQNTIP-------TGNGNKTLDPG 109
>gb|ERP48277.1| hypothetical protein POPTR_0027s00370g [Populus trichocarpa]
Length = 1005
Score = 159 bits (403), Expect = 4e-37
Identities = 80/105 (76%), Positives = 87/105 (82%)
Frame = +1
Query: 46 GAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYTA 225
G EP MD GDWR QLQPDSRQRIVNKIMETLKRHLPFS QEGL+ELKKIAVRFEEKIYTA
Sbjct: 12 GGEPVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELKKIAVRFEEKIYTA 71
Query: 226 AASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPG 360
A +Q DYLRKISLKMLTME+KS+N +P +GN N+ DPG
Sbjct: 72 ATNQSDYLRKISLKMLTMETKSQNTIP-------TGNGNKPLDPG 109
>gb|ERP48285.1| hypothetical protein POPTR_0027s00430g [Populus trichocarpa]
Length = 981
Score = 159 bits (402), Expect = 5e-37
Identities = 79/105 (75%), Positives = 87/105 (82%)
Frame = +1
Query: 46 GAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYTA 225
G EP MD GDWR QLQPDSRQRIVNKIMETLKRHLPFS QEGL+ELKK+AVRFEEKIYTA
Sbjct: 12 GGEPVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELKKVAVRFEEKIYTA 71
Query: 226 AASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPG 360
A +Q DYLRKISLKMLTME+KS+N +P +GN N+ DPG
Sbjct: 72 ATNQSDYLRKISLKMLTMETKSQNTIP-------TGNGNKPLDPG 109
>gb|ERP48284.1| hypothetical protein POPTR_0027s00430g [Populus trichocarpa]
Length = 942
Score = 159 bits (402), Expect = 5e-37
Identities = 79/105 (75%), Positives = 87/105 (82%)
Frame = +1
Query: 46 GAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYTA 225
G EP MD GDWR QLQPDSRQRIVNKIMETLKRHLPFS QEGL+ELKK+AVRFEEKIYTA
Sbjct: 12 GGEPVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELKKVAVRFEEKIYTA 71
Query: 226 AASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPG 360
A +Q DYLRKISLKMLTME+KS+N +P +GN N+ DPG
Sbjct: 72 ATNQSDYLRKISLKMLTMETKSQNTIP-------TGNGNKPLDPG 109
>gb|ERP48283.1| hypothetical protein POPTR_0027s00430g [Populus trichocarpa]
Length = 874
Score = 159 bits (402), Expect = 5e-37
Identities = 79/105 (75%), Positives = 87/105 (82%)
Frame = +1
Query: 46 GAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYTA 225
G EP MD GDWR QLQPDSRQRIVNKIMETLKRHLPFS QEGL+ELKK+AVRFEEKIYTA
Sbjct: 12 GGEPVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELKKVAVRFEEKIYTA 71
Query: 226 AASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPG 360
A +Q DYLRKISLKMLTME+KS+N +P +GN N+ DPG
Sbjct: 72 ATNQSDYLRKISLKMLTMETKSQNTIP-------TGNGNKPLDPG 109
>ref|XP_004486633.1| PREDICTED: uncharacterized protein LOC101503108 isoform X1 [Cicer
arietinum]
Length = 234
Score = 157 bits (397), Expect = 2e-36
Identities = 76/105 (72%), Positives = 88/105 (83%)
Frame = +1
Query: 43 RGAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYT 222
+GAEP MD+ DWR QLQP+SRQR+VNKIM+TLKRHLP S QEGL EL+KIA RFEEKI+T
Sbjct: 129 QGAEPNMDSSDWRGQLQPESRQRVVNKIMDTLKRHLPDSGQEGLFELRKIAQRFEEKIFT 188
Query: 223 AAASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDP 357
AA SQPDYLRKISLKMLTM++KS+ M N++P N G SNR P P
Sbjct: 189 AATSQPDYLRKISLKMLTMDTKSQGTMTNNIPSNQGGPSNRPPYP 233
Score = 143 bits (361), Expect = 3e-32
Identities = 72/105 (68%), Positives = 82/105 (78%)
Frame = +1
Query: 43 RGAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRFEEKIYT 222
+ AE MD+ DWR QLQP+SRQR+VNKIM+TLKRHLP S QEGL EL KIA RFEEKI+T
Sbjct: 10 QSAENNMDSSDWRGQLQPESRQRVVNKIMDTLKRHLPDSGQEGLFELWKIAQRFEEKIFT 69
Query: 223 AAASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDP 357
AA SQPDYL KISLKMLTME KS + N++P N G SN+ P P
Sbjct: 70 AATSQPDYLWKISLKMLTMEIKSHGTLANNIPSNQGGPSNKPPVP 114
>ref|XP_006359328.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X3 [Solanum tuberosum]
Length = 1349
Score = 157 bits (396), Expect = 3e-36
Identities = 81/115 (70%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
Frame = +1
Query: 19 QPQSGHYGRGAEP-TMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIA 195
Q Q G G GA MD+GDWR QL PDSRQRIVNKIMETLKRHLP S QEG++ELKKIA
Sbjct: 10 QAQGGGEGGGAAAGAMDSGDWRTQLLPDSRQRIVNKIMETLKRHLPVSGQEGVQELKKIA 69
Query: 196 VRFEEKIYTAAASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPG 360
VRFEEKIY+AA SQ DYLRKISLKMLTME+KS+ PM NS+ PN + + A PG
Sbjct: 70 VRFEEKIYSAATSQQDYLRKISLKMLTMETKSQTPMTNSVQPNPASSGQNALGPG 124