BLASTX nr result
ID: Jatropha_contig00011454
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00011454
(715 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002528699.1| transcription elongation factor s-II, putati... 76 9e-12
gb|ESR42839.1| hypothetical protein CICLE_v10011982mg [Citrus cl... 69 1e-09
gb|AFK45155.1| unknown [Medicago truncatula] 52 1e-09
emb|CBI18026.3| unnamed protein product [Vitis vinifera] 68 2e-09
ref|XP_002272768.1| PREDICTED: transcription elongation factor A... 68 2e-09
gb|AFK38752.1| unknown [Medicago truncatula] 50 5e-09
gb|EOY04429.1| Transcript elongation factor IIS, putative [Theob... 66 9e-09
gb|ERN04195.1| hypothetical protein AMTR_s00077p00115030 [Ambore... 48 2e-08
gb|ABK25146.1| unknown [Picea sitchensis] 42 2e-07
gb|EEE91779.2| transcription factor S-II domain-containing famil... 62 2e-07
ref|XP_002308256.1| predicted protein [Populus trichocarpa] 62 2e-07
ref|XP_004138392.1| PREDICTED: transcription elongation factor A... 61 4e-07
ref|XP_002323085.1| predicted protein [Populus trichocarpa] 59 2e-06
gb|ESQ52525.1| hypothetical protein EUTSA_v10016682mg [Eutrema s... 57 7e-06
>ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223531871|gb|EEF33688.1| transcription elongation
factor s-II, putative [Ricinus communis]
Length = 342
Score = 76.3 bits (186), Expect = 9e-12
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Frame = +3
Query: 282 TGGGEVCRCLA*LTR---FPITYDIMASTQIGTRLPPISKLPREKIQTVDFDLLEMRNTT 452
+ G EV RC+ L + FPI+YDI+ S+Q+G RL P++K PREKIQTV DLLEM
Sbjct: 26 SNGPEVVRCVDALKQLKIFPISYDILVSSQVGKRLRPLTKHPREKIQTVASDLLEMWKKI 85
Query: 453 AIDETTNIKNGFLDS 497
IDETT KNG +D+
Sbjct: 86 VIDETTRKKNGTVDN 100
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +1
Query: 199 MERELVELFEVVQKAADVAANDEVSSSGPEVVRCVDALLSSRVF 330
MERELVELFE +KAAD AA+D VSS+GPEVVRCVDAL ++F
Sbjct: 1 MERELVELFEAAKKAADAAASDGVSSNGPEVVRCVDALKQLKIF 44
>gb|ESR42839.1| hypothetical protein CICLE_v10011982mg [Citrus clementina]
Length = 375
Score = 69.3 bits (168), Expect = 1e-09
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Frame = +3
Query: 282 TGGGEVCRCLA*LTR---FPITYDIMASTQIGTRLPPISKLPREKIQTVDFDLLEMRNTT 452
+GG EV RC+ L R FP+TYD++ STQ+G RL P++K PREKIQ V +LL++
Sbjct: 26 SGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDIWKKI 85
Query: 453 AIDETT-NIKNG 485
I+ETT N KNG
Sbjct: 86 VIEETTRNKKNG 97
>gb|AFK45155.1| unknown [Medicago truncatula]
Length = 369
Score = 52.4 bits (124), Expect(2) = 1e-09
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +3
Query: 294 EVCRCLA*LTR---FPITYDIMASTQIGTRLPPISKLPREKIQTVDFDLLEMRNTTAIDE 464
E RCL L + FP+ Y I+ +TQ+G L ++K PRE I+T DL+ + I E
Sbjct: 32 EETRCLDALEQLKNFPVNYKILVNTQVGKHLKTLTKHPRENIRTFAVDLIAIWKDVIIKE 91
Query: 465 TTNIKNGFLDSAI 503
T+ KNG DS +
Sbjct: 92 TSKNKNGASDSKV 104
Score = 36.6 bits (83), Expect(2) = 1e-09
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +1
Query: 202 ERELVELFEVVQKAADVAANDEVSSSGPEVVRCVDAL 312
E+ELVEL+E +KAAD + + + S S E RC+DAL
Sbjct: 6 EKELVELYEAAKKAADASTSTDNSPS--EETRCLDAL 40
>emb|CBI18026.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 68.2 bits (165), Expect = 2e-09
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = +3
Query: 282 TGGGEVCRC---LA*LTRFPITYDIMASTQIGTRLPPISKLPREKIQTVDFDLLEMRNTT 452
+ G EV RC L L FP+TY+ +ASTQ+G RL ++K P+ KIQ++ DLLEM
Sbjct: 26 SNGPEVGRCVDALKQLKSFPVTYEALASTQVGKRLRHLTKHPKGKIQSLASDLLEMWKKV 85
Query: 453 AIDETTNIKNGFLDS 497
IDET N KNG LD+
Sbjct: 86 VIDETRNKKNGGLDN 100
Score = 60.1 bits (144), Expect = 7e-07
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = +1
Query: 199 MERELVELFEVVQKAADVAANDEVSSSGPEVVRCVDALLSSRVF 330
MERELVELFE +KAAD AA D VSS+GPEV RCVDAL + F
Sbjct: 1 MERELVELFESAKKAADAAATDGVSSNGPEVGRCVDALKQLKSF 44
>ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
vinifera]
Length = 367
Score = 68.2 bits (165), Expect = 2e-09
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = +3
Query: 282 TGGGEVCRC---LA*LTRFPITYDIMASTQIGTRLPPISKLPREKIQTVDFDLLEMRNTT 452
+ G EV RC L L FP+TY+ +ASTQ+G RL ++K P+ KIQ++ DLLEM
Sbjct: 26 SNGPEVGRCVDALKQLKSFPVTYEALASTQVGKRLRHLTKHPKGKIQSLASDLLEMWKKV 85
Query: 453 AIDETTNIKNGFLDS 497
IDET N KNG LD+
Sbjct: 86 VIDETRNKKNGGLDN 100
Score = 60.1 bits (144), Expect = 7e-07
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = +1
Query: 199 MERELVELFEVVQKAADVAANDEVSSSGPEVVRCVDALLSSRVF 330
MERELVELFE +KAAD AA D VSS+GPEV RCVDAL + F
Sbjct: 1 MERELVELFESAKKAADAAATDGVSSNGPEVGRCVDALKQLKSF 44
>gb|AFK38752.1| unknown [Medicago truncatula]
Length = 204
Score = 50.4 bits (119), Expect(2) = 5e-09
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +3
Query: 294 EVCRCLA*LTR---FPITYDIMASTQIGTRLPPISKLPREKIQTVDFDLLEMRNTTAIDE 464
E RCL L + FP+ Y I+ +TQ+G L ++K PRE I+ DL+ + I E
Sbjct: 32 EETRCLDALEQLKNFPVNYKILVNTQVGKHLKTLTKHPRENIRAFAVDLIAIWKDVIIKE 91
Query: 465 TTNIKNGFLDSAI 503
T+ KNG DS +
Sbjct: 92 TSKNKNGASDSKV 104
Score = 36.6 bits (83), Expect(2) = 5e-09
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +1
Query: 202 ERELVELFEVVQKAADVAANDEVSSSGPEVVRCVDAL 312
E+ELVEL+E +KAAD + + + S S E RC+DAL
Sbjct: 6 EKELVELYEAAKKAADASTSTDNSPS--EETRCLDAL 40
>gb|EOY04429.1| Transcript elongation factor IIS, putative [Theobroma cacao]
Length = 367
Score = 66.2 bits (160), Expect = 9e-09
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Frame = +3
Query: 282 TGGGEVCRC---LA*LTRFPITYDIMASTQIGTRLPPISKLPREKIQTVDFDLLEMRNTT 452
+ G EV RC L L FP+TYDI+ STQ+G +L P++K PRE I TV DLLE+
Sbjct: 26 SNGPEVSRCVDALKQLKAFPVTYDILVSTQVGKKLRPLTKHPRENIHTVASDLLELWKKI 85
Query: 453 AIDETTNIKNGFLDSAI 503
I+ETT K S +
Sbjct: 86 VIEETTKSKKNGTTSTV 102
Score = 60.5 bits (145), Expect = 5e-07
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +1
Query: 199 MERELVELFEVVQKAADVAANDEVSSSGPEVVRCVDALLSSRVF 330
MERELV+LFE +KAAD+A+ D VSS+GPEV RCVDAL + F
Sbjct: 1 MERELVDLFEAAKKAADLASTDAVSSNGPEVSRCVDALKQLKAF 44
>gb|ERN04195.1| hypothetical protein AMTR_s00077p00115030 [Amborella trichopoda]
Length = 360
Score = 48.1 bits (113), Expect(2) = 2e-08
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = +3
Query: 294 EVCRCLA*LTR---FPITYDIMASTQIGTRLPPISKLPREKIQTVDFDLLEMRNTTAIDE 464
E RCL L FP++ I+ STQ+G RL P++K PR KIQ V D+L++ I E
Sbjct: 34 EEARCLDTLKLMKDFPVSTSILVSTQVGKRLRPLTKHPRAKIQAVASDVLDIWKNLVIKE 93
Query: 465 TT 470
T+
Sbjct: 94 TS 95
Score = 37.0 bits (84), Expect(2) = 2e-08
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +1
Query: 193 ESMERELVELFEVVQKAADVAANDEVSSSGPEVVRCVDAL 312
+SME EL++LF+ +KAAD+AA D+ S E RC+D L
Sbjct: 4 KSMETELLKLFDKAKKAADLAAFDQ-GSVQTEEARCLDTL 42
>gb|ABK25146.1| unknown [Picea sitchensis]
Length = 331
Score = 42.4 bits (98), Expect(2) = 2e-07
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +3
Query: 318 LTRFPITYDIMASTQIGTRLPPISKLPREKIQTVDFDLLEMRNTTAIDET 467
L P+T I+ STQ+G RL ++K PREKI+T+ +LL+ ET
Sbjct: 45 LRSVPVTMGILVSTQVGKRLRNVTKHPREKIRTLAAELLDAWKKVVTSET 94
Score = 39.7 bits (91), Expect(2) = 2e-07
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +1
Query: 193 ESMERELVELFEVVQKAADVAANDEVSSSGPEVVRCVDALLSSR 324
+++E ELVELF+ QKAAD AA D+ E RC+DAL + R
Sbjct: 4 KAVENELVELFQKAQKAADKAAKDDGCEEAEE-QRCLDALKALR 46
>gb|EEE91779.2| transcription factor S-II domain-containing family protein [Populus
trichocarpa]
Length = 352
Score = 62.0 bits (149), Expect = 2e-07
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Frame = +3
Query: 282 TGGGEVCRC---LA*LTRFPITYDIMASTQIGTRLPPISKLPREKIQTVDFDLLEMRNTT 452
+ G EV RC L L +F +T +++ STQ+G +L P++K P+EKI+ V DLLEM
Sbjct: 26 SSGPEVTRCVDSLKQLRKFKVTSELLVSTQVGKKLRPLAKHPKEKIRAVASDLLEMWKKM 85
Query: 453 AIDETTNIKNGFLDS 497
IDET KNG +DS
Sbjct: 86 VIDETRK-KNGSIDS 99
Score = 58.9 bits (141), Expect = 1e-06
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +1
Query: 199 MERELVELFEVVQKAADVAANDEVSSSGPEVVRCVDALLSSRVFR 333
ME E VELF+ +KAAD + ND+VSSSGPEV RCVD+L R F+
Sbjct: 1 MEMEFVELFDEAKKAADASLNDDVSSSGPEVTRCVDSLKQLRKFK 45
>ref|XP_002308256.1| predicted protein [Populus trichocarpa]
Length = 352
Score = 62.0 bits (149), Expect = 2e-07
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Frame = +3
Query: 282 TGGGEVCRC---LA*LTRFPITYDIMASTQIGTRLPPISKLPREKIQTVDFDLLEMRNTT 452
+ G EV RC L L +F +T +++ STQ+G +L P++K P+EKI+ V DLLEM
Sbjct: 26 SSGPEVTRCVDSLKQLRKFKVTSELLVSTQVGKKLRPLAKHPKEKIRAVASDLLEMWKKM 85
Query: 453 AIDETTNIKNGFLDS 497
IDET KNG +DS
Sbjct: 86 VIDETRK-KNGSIDS 99
Score = 58.9 bits (141), Expect = 1e-06
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +1
Query: 199 MERELVELFEVVQKAADVAANDEVSSSGPEVVRCVDALLSSRVFR 333
ME E VELF+ +KAAD + ND+VSSSGPEV RCVD+L R F+
Sbjct: 1 MEMEFVELFDEAKKAADASLNDDVSSSGPEVTRCVDSLKQLRKFK 45
>ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
[Cucumis sativus]
Length = 369
Score = 60.8 bits (146), Expect = 4e-07
Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +3
Query: 285 GGGEVCRCL---A*LTRFPITYDIMASTQIGTRLPPISKLPREKIQTVDFDLLEMRNTTA 455
GG E RCL L +FP+TY I+ STQ+G RL ++K P++KIQ DL+EM
Sbjct: 26 GGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHPKKKIQEHASDLIEMWKEIV 85
Query: 456 IDETT-NIKNGFLDSAILPSVAS 521
I ET N KNG S P + S
Sbjct: 86 IKETNKNKKNGNASSKDSPKIGS 108
>ref|XP_002323085.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +1
Query: 199 MERELVELFEVVQKAADVAANDEVSSSGPEVVRCVDALLSSRVFR 333
ME+ELVELF+ +KAAD + ND+ SSSGPEV RCVD+L R F+
Sbjct: 1 MEKELVELFDKAKKAADASLNDDKSSSGPEVSRCVDSLKQLRKFK 45
Score = 56.6 bits (135), Expect = 7e-06
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Frame = +3
Query: 282 TGGGEVCRC---LA*LTRFPITYDIMASTQIGTRLPPISKLPREKIQTVDFDLLEMRNTT 452
+ G EV RC L L +F +T +I+ STQ+G +L P++K P++KI+ V DLLE
Sbjct: 26 SSGPEVSRCVDSLKQLRKFKVTSEILVSTQVGKKLRPLAKHPKDKIRAVASDLLETWKKI 85
Query: 453 AIDETTNIKN 482
IDET KN
Sbjct: 86 VIDETMRKKN 95
>gb|ESQ52525.1| hypothetical protein EUTSA_v10016682mg [Eutrema salsugineum]
Length = 433
Score = 56.6 bits (135), Expect = 7e-06
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +1
Query: 181 LGI*ESMERELVELFEVVQKAADVAANDEVSSSGPEVVRCVDALLSSRVF 330
LGI +ME EL+ELFE +KAAD AA D V+SSGPE+ +C+DAL + F
Sbjct: 47 LGIRGTMETELIELFEGAKKAADAAALDGVTSSGPEISQCLDALKQLKKF 96