BLASTX nr result
ID: Jatropha_contig00011430
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00011430
(716 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subun... 231 1e-58
sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carbox... 192 3e-52
gb|ACA42439.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 185 4e-50
sp|O22077.1|RBS_FAGCR RecName: Full=Ribulose bisphosphate carbox... 187 1e-49
sp|Q42915.1|RBS_MANES RecName: Full=Ribulose bisphosphate carbox... 201 2e-49
gb|AAU14862.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 186 3e-49
gb|ESR44019.1| hypothetical protein CICLE_v10012893mg [Citrus cl... 181 6e-49
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai... 199 7e-49
gb|AAF06098.1| ribulose 1,5-bisphosphate carboxylase small chain... 197 3e-48
gb|AAG24884.1|AF303941_1 ribulose-1,5-bisphosphate carboxylase s... 175 4e-48
ref|NP_001241137.1| ribulose bisphosphate carboxylase small chai... 175 4e-48
gb|AAA82069.1| ribulose 1,5-bisphosphate carboxylase small subun... 175 4e-48
ref|NP_001235314.1| uncharacterized protein LOC100500504 [Glycin... 174 5e-48
sp|P00865.1|RBS1_SOYBN RecName: Full=Ribulose bisphosphate carbo... 174 5e-48
sp|Q42822.1|RBS_GLYTO RecName: Full=Ribulose bisphosphate carbox... 175 8e-48
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 178 1e-47
sp|O65194.1|RBS_MEDSA RecName: Full=Ribulose bisphosphate carbox... 178 1e-47
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox... 195 1e-47
sp|P12468.1|RBS4_SOYBN RecName: Full=Ribulose bisphosphate carbo... 172 2e-47
gb|AAF06100.1| ribulose 1,5-bisphosphate carboxylase small chain... 194 2e-47
>gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subunit [Jatropha
curcas]
Length = 181
Score = 231 bits (590), Expect = 1e-58
Identities = 132/188 (70%), Positives = 142/188 (75%), Gaps = 10/188 (5%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 235
MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIA NGGRVQCMK
Sbjct: 1 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIAGNGGRVQCMK 60
Query: 236 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENTDHQDTT 415
VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYREN
Sbjct: 61 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENN------ 114
Query: 416 MDATGHVEAAHVWMHR--------RSSVLNELDEALR--PPKWLR*DH*FDSIASACIVH 565
+ G+ + + M + VLNELDEA++ P ++R FDS V
Sbjct: 115 -RSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIG-FDSYRQ---VQ 169
Query: 566 CYSLRAFK 589
C S A+K
Sbjct: 170 CISFIAYK 177
>sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|168217|gb|AAA33361.1|
ribulose-1,5-bisphosphate carboxylase small subunit
[Hevea brasiliensis]
Length = 183
Score = 192 bits (489), Expect(2) = 3e-52
Identities = 97/113 (85%), Positives = 102/113 (90%), Gaps = 1/113 (0%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCM 232
MASSMLSTA VA INRASPAQA+MVAPFTGLKST+ FP RKTT DITSIASNGGRVQCM
Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCM 60
Query: 233 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRE 391
+VWP +G K +ETLSYLPPLTREQLAKEVEYLLR GWVPCLEFELEHG VYRE
Sbjct: 61 QVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYRE 113
Score = 39.7 bits (91), Expect(2) = 3e-52
Identities = 17/25 (68%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = +1
Query: 394 HRSPGYYDGRYWTCGSCP---CLDA 459
HRSPGYYDGRYWT P C DA
Sbjct: 115 HRSPGYYDGRYWTMWKLPMFGCTDA 139
>gb|ACA42439.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Hevea brasiliensis]
Length = 183
Score = 185 bits (470), Expect(2) = 4e-50
Identities = 94/113 (83%), Positives = 98/113 (86%), Gaps = 1/113 (0%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCM 232
MASSMLSTA VA INRASPAQA+MVAPFTGLKST+ FP RKTT DITSIASNGGRVQCM
Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCM 60
Query: 233 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRE 391
+VWP +G K FET YLPPLTREQLAKEVEYL GWVPCLEFELEHG VYRE
Sbjct: 61 QVWPPRGKKFFETFLYLPPLTREQLAKEVEYLFCKGWVPCLEFELEHGTVYRE 113
Score = 39.7 bits (91), Expect(2) = 4e-50
Identities = 17/25 (68%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = +1
Query: 394 HRSPGYYDGRYWTCGSCP---CLDA 459
HRSPGYYDGRYWT P C DA
Sbjct: 115 HRSPGYYDGRYWTMWKLPMFGCTDA 139
>sp|O22077.1|RBS_FAGCR RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|2588890|dbj|BAA23214.1| small subunit of
ribulose-1,5-bisphosphate carboxylase/oxygenase [Fagus
crenata]
Length = 182
Score = 187 bits (476), Expect(2) = 1e-49
Identities = 90/114 (78%), Positives = 104/114 (91%), Gaps = 1/114 (0%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCM 232
MASSM+S+ATVA+++RA+PAQATMVAPFTGLKSTA FPA RK+ NDITS+ASNGGRVQCM
Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCM 60
Query: 233 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYREN 394
KVWP GL+KFETLSYLPPL+ E LAK++EYL+ GW+PCLEFELEH FVYREN
Sbjct: 61 KVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYREN 114
Score = 35.8 bits (81), Expect(2) = 1e-49
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 432 MWKLPMFGCTDAVQS*TSLMR-H*GHPNGFVRII 530
MWKLPMFGCTDA Q L +P +RII
Sbjct: 128 MWKLPMFGCTDATQVLAELQEASKTYPTSHIRII 161
>sp|Q42915.1|RBS_MANES RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|168363|gb|AAA99429.1| ribulose
1,5-bisphosphate carboxylase [Manihot esculenta]
gi|6272549|gb|AAF06099.1| ribulose 1,5-bisphosphate
carboxylase small chain precursor [Manihot esculenta]
Length = 182
Score = 201 bits (510), Expect = 2e-49
Identities = 116/189 (61%), Positives = 132/189 (69%), Gaps = 11/189 (5%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCM 232
MASSMLSTATVASINR SPAQATMVAPFTGLKST FP RKT +DITSI SNGG+VQCM
Sbjct: 1 MASSMLSTATVASINRVSPAQATMVAPFTGLKSTPVFPTTRKTNSDITSITSNGGKVQCM 60
Query: 233 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENTDHQDT 412
KVWPT G+KKFETLSYLPPLTREQLA EVEYLLRSGW+PCLEFELEHG VYRE+
Sbjct: 61 KVWPTLGMKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHA----- 115
Query: 413 TMDATGHVEAAHVWMHR--------RSSVLNELDEALR--PPKWLR*DH*FDSIASACIV 562
G+ + + M + + VL ELDE ++ P + R FD++ V
Sbjct: 116 --RVPGYYDGRYWTMWKLPMFGCTDAAQVLKELDELIKHHPDGYARIIG-FDNVRQ---V 169
Query: 563 HCYSLRAFK 589
C S A+K
Sbjct: 170 QCISFLAYK 178
>gb|AAU14862.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Fagus sylvatica]
Length = 181
Score = 186 bits (473), Expect(2) = 3e-49
Identities = 89/114 (78%), Positives = 104/114 (91%), Gaps = 1/114 (0%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCM 232
MASSM+S+ATVA+++RA+PAQATMVAPFTGLKSTA FPA +K+ NDITS+ASNGGRVQCM
Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATQKSNNDITSLASNGGRVQCM 60
Query: 233 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYREN 394
KVWP GL+KFETLSYLPPL+ E LAK++EYL+ GW+PCLEFELEH FVYREN
Sbjct: 61 KVWPPLGLQKFETLSYLPPLSLESLAKQIEYLILKGWIPCLEFELEHPFVYREN 114
Score = 35.8 bits (81), Expect(2) = 3e-49
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 432 MWKLPMFGCTDAVQS*TSLMR-H*GHPNGFVRII 530
MWKLPMFGCTDA Q L +P +RII
Sbjct: 128 MWKLPMFGCTDATQVLAELQEASKTYPTSHIRII 161
>gb|ESR44019.1| hypothetical protein CICLE_v10012893mg [Citrus clementina]
Length = 182
Score = 181 bits (460), Expect(2) = 6e-49
Identities = 89/114 (78%), Positives = 102/114 (89%), Gaps = 1/114 (0%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCM 232
MASSM+S+ATVA+ NRAS AQA+MVAPFTGLKS++ FPA +KT NDITSIASNGGRVQCM
Sbjct: 1 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCM 60
Query: 233 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYREN 394
KVWP GLKKFETLSYLPPL+ E L KE+ YL+RSGW+PCLEFELE G+VYRE+
Sbjct: 61 KVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREH 114
Score = 39.7 bits (91), Expect(2) = 6e-49
Identities = 17/25 (68%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = +1
Query: 394 HRSPGYYDGRYWTCGSCP---CLDA 459
HRSPGYYDGRYWT P C DA
Sbjct: 115 HRSPGYYDGRYWTMWKLPMYGCTDA 139
>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 185
Score = 199 bits (506), Expect = 7e-49
Identities = 115/189 (60%), Positives = 134/189 (70%), Gaps = 11/189 (5%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCM 232
MASSMLSTATVAS+NRASPAQA+MVAPFTGLKST+ FP RKT DIT++A+NGGRVQCM
Sbjct: 1 MASSMLSTATVASLNRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCM 60
Query: 233 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENTDHQDT 412
+VWP G KKFETLSYLP LTREQLAKEVEYLLR GWVPCLEFELEHGFVYREN
Sbjct: 61 QVWPPLGKKKFETLSYLPDLTREQLAKEVEYLLRKGWVPCLEFELEHGFVYRENA----- 115
Query: 413 TMDATGHVEAAHVWMHR--------RSSVLNELDEALR--PPKWLR*DH*FDSIASACIV 562
+ G+ + + M + VL ELDEA++ P ++R FD++ V
Sbjct: 116 --RSPGYYDGRYWTMWKLPMFGCSDAVQVLKELDEAIKAYPNSFVRIIG-FDNVRQ---V 169
Query: 563 HCYSLRAFK 589
C S A+K
Sbjct: 170 QCISFIAYK 178
>gb|AAF06098.1| ribulose 1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta] gi|6272551|gb|AAF06101.1| ribulose
1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta]
Length = 184
Score = 197 bits (501), Expect = 3e-48
Identities = 112/188 (59%), Positives = 133/188 (70%), Gaps = 10/188 (5%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPAR-KTTNDITSIASNGGRVQCM 232
MA+SMLSTATVASINRASPAQA+MVAPFTGLKST+ FPA KT+ DITS+ASNGGRVQCM
Sbjct: 1 MATSMLSTATVASINRASPAQASMVAPFTGLKSTSAFPATTKTSADITSLASNGGRVQCM 60
Query: 233 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENTDHQDT 412
+VWPT+G KKFETLSYLPPL+REQLA E++YLLRSGW+PCLEFELEHGFVYR +
Sbjct: 61 QVWPTRGKKKFETLSYLPPLSREQLASEIDYLLRSGWIPCLEFELEHGFVYRAHG----- 115
Query: 413 TMDATGHVEAAHVWMHR--------RSSVLNELDEALRP-PKWLR*DH*FDSIASACIVH 565
G+ + + M + S VL ELDE ++ P FD++ V
Sbjct: 116 --SLPGYYDGRYWTMWKLPMFGCTDSSQVLKELDELIKAHPDGFARIIGFDNVRQ---VQ 170
Query: 566 CYSLRAFK 589
C S A+K
Sbjct: 171 CISFIAYK 178
>gb|AAG24884.1|AF303941_1 ribulose-1,5-bisphosphate carboxylase small subunit rbcS3 [Glycine
max]
Length = 178
Score = 175 bits (443), Expect(2) = 4e-48
Identities = 87/113 (76%), Positives = 94/113 (83%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 235
MASSM+S+ V ++NRA A MVAPFTGLKS AGFP RKT NDITSIASNGGRVQCM+
Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQ 57
Query: 236 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYREN 394
VWP G KKFETLSYLP L QLAKEVEYLLR GW+PCLEFELEHGFVYRE+
Sbjct: 58 VWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREH 110
Score = 43.5 bits (101), Expect(2) = 4e-48
Identities = 23/39 (58%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 417 WTLLDMWKLPMFGCTDAVQS*TSLMR-H*GHPNGFVRII 530
WT MWKLPMFGCTDA Q L +PNGF+RII
Sbjct: 122 WT---MWKLPMFGCTDASQVLKELQEAKTAYPNGFIRII 157
>ref|NP_001241137.1| ribulose bisphosphate carboxylase small chain 1, chloroplastic-like
[Glycine max] gi|10946375|gb|AAG24882.1|AF303939_1
ribulose-1,5-bisphosphate carboxylase small subunit
rbcS1 [Glycine max] gi|1055368|gb|AAA81328.1|
ribulose-1,5-bisphosphate carboxylase small subunit
[Glycine max]
Length = 178
Score = 175 bits (443), Expect(2) = 4e-48
Identities = 87/113 (76%), Positives = 94/113 (83%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 235
MASSM+S+ V ++NRA A MVAPFTGLKS AGFP RKT NDITSIASNGGRVQCM+
Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQ 57
Query: 236 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYREN 394
VWP G KKFETLSYLP L QLAKEVEYLLR GW+PCLEFELEHGFVYRE+
Sbjct: 58 VWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREH 110
Score = 43.5 bits (101), Expect(2) = 4e-48
Identities = 23/39 (58%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 417 WTLLDMWKLPMFGCTDAVQS*TSLMR-H*GHPNGFVRII 530
WT MWKLPMFGCTDA Q L +PNGF+RII
Sbjct: 122 WT---MWKLPMFGCTDASQVLKELQEAKTAYPNGFIRII 157
>gb|AAA82069.1| ribulose 1,5-bisphosphate carboxylase small subunit precursor
[Glycine soja]
Length = 178
Score = 175 bits (443), Expect(2) = 4e-48
Identities = 87/113 (76%), Positives = 94/113 (83%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 235
MASSM+S+ V ++NRA A MVAPFTGLKS AGFP RKT NDITSIASNGGRVQCM+
Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQ 57
Query: 236 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYREN 394
VWP G KKFETLSYLP L QLAKEVEYLLR GW+PCLEFELEHGFVYRE+
Sbjct: 58 VWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREH 110
Score = 43.5 bits (101), Expect(2) = 4e-48
Identities = 23/39 (58%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 417 WTLLDMWKLPMFGCTDAVQS*TSLMR-H*GHPNGFVRII 530
WT MWKLPMFGCTDA Q L +PNGF+RII
Sbjct: 122 WT---MWKLPMFGCTDASQVLKELQEAKTAYPNGFIRII 157
>ref|NP_001235314.1| uncharacterized protein LOC100500504 [Glycine max]
gi|255630492|gb|ACU15604.1| unknown [Glycine max]
Length = 178
Score = 174 bits (442), Expect(2) = 5e-48
Identities = 87/113 (76%), Positives = 94/113 (83%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 235
MASSM+S+ V ++NRA A MVAPFTGLKS AGFP RKT NDITSIASNGGRVQCM+
Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQ 57
Query: 236 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYREN 394
VWP G KKFETLSYLP L QLAKEVEYLLR GW+PCLEFELEHGFVYRE+
Sbjct: 58 VWPPIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREH 110
Score = 43.5 bits (101), Expect(2) = 5e-48
Identities = 23/39 (58%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 417 WTLLDMWKLPMFGCTDAVQS*TSLMR-H*GHPNGFVRII 530
WT MWKLPMFGCTDA Q L +PNGF+RII
Sbjct: 122 WT---MWKLPMFGCTDASQVLKELQEAKTAYPNGFIRII 157
>sp|P00865.1|RBS1_SOYBN RecName: Full=Ribulose bisphosphate carboxylase small chain 1,
chloroplastic; Short=RuBisCO small subunit 1; Flags:
Precursor gi|18742|emb|CAA23736.1| rubpcase [Glycine
max]
Length = 178
Score = 174 bits (442), Expect(2) = 5e-48
Identities = 87/113 (76%), Positives = 94/113 (83%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 235
MASSM+S+ V ++NRA A MVAPFTGLKS AGFP RKT NDITSIASNGGRVQCM+
Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQ 57
Query: 236 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYREN 394
VWP G KKFETLSYLP L QLAKEVEYLLR GW+PCLEFELEHGFVYRE+
Sbjct: 58 VWPPIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREH 110
Score = 43.5 bits (101), Expect(2) = 5e-48
Identities = 23/39 (58%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 417 WTLLDMWKLPMFGCTDAVQS*TSLMR-H*GHPNGFVRII 530
WT MWKLPMFGCTDA Q L +PNGF+RII
Sbjct: 122 WT---MWKLPMFGCTDASQVLKELQEAKTAYPNGFIRII 157
>sp|Q42822.1|RBS_GLYTO RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|1079738|gb|AAA82070.1| ribulose
1,5-bisphosphate carboxylase/oxygenase small subunit
precursor [Glycine tomentella]
Length = 178
Score = 175 bits (444), Expect(2) = 8e-48
Identities = 87/113 (76%), Positives = 93/113 (82%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 235
MASSM+S+ V ++NRA A VAPFTGLKS AGFP RKT NDI SIASNGGRVQCM+
Sbjct: 1 MASSMISSPAVTTVNRAG---AGTVAPFTGLKSMAGFPTRKTNNDIASIASNGGRVQCMQ 57
Query: 236 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYREN 394
VWPT G KKFETLSYLP L QLAKEVEYLLR GW+PCLEFELEHGFVYREN
Sbjct: 58 VWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREN 110
Score = 42.0 bits (97), Expect(2) = 8e-48
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 417 WTLLDMWKLPMFGCTDAVQS*TSLMR-H*GHPNGFVRII 530
WT MWKLP+FGCTDA Q L +PNGF+RII
Sbjct: 122 WT---MWKLPVFGCTDASQVLKELQEAKTAYPNGFIRII 157
>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 178 bits (452), Expect(2) = 1e-47
Identities = 84/113 (74%), Positives = 99/113 (87%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 235
MASS++S+A VA++NRASPAQA+MVAPFTGLKS + FP + + DITS+ASNGGRVQCM+
Sbjct: 1 MASSIVSSAAVAAVNRASPAQASMVAPFTGLKSASAFPVTRKSADITSLASNGGRVQCMQ 60
Query: 236 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYREN 394
VWP G KKFETLSYLPPL+RE+L KE+EYLLR WVPCLEFELE GFVYR+N
Sbjct: 61 VWPPIGKKKFETLSYLPPLSREELLKEIEYLLRMNWVPCLEFELEKGFVYRDN 113
Score = 38.5 bits (88), Expect(2) = 1e-47
Identities = 22/39 (56%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 417 WTLLDMWKLPMFGCTDAVQS*TSLMRH-*GHPNGFVRII 530
WT MWKLPMFGCTD +Q L +PN FVRII
Sbjct: 125 WT---MWKLPMFGCTDPLQVFKELDEAIKTYPNAFVRII 160
>sp|O65194.1|RBS_MEDSA RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|3044116|gb|AAC13293.1|
ribulose-1,5-bisphosphate carboxylase small subunit
[Medicago sativa]
Length = 180
Score = 178 bits (452), Expect(2) = 1e-47
Identities = 85/111 (76%), Positives = 97/111 (87%), Gaps = 1/111 (0%)
Frame = +2
Query: 65 SMLSTATVASINRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCMKVW 241
+++S+A V ++NRAS AQA +VAPFTGLKS+AGFP +KT NDITSIASNGGRV CM+VW
Sbjct: 2 ALISSAAVTTVNRASSAQANLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVW 61
Query: 242 PTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYREN 394
P G KKFETLSYLPPLT EQLAKEVEYL+R GW+PCLEFELE GFVYREN
Sbjct: 62 PPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYREN 112
Score = 38.5 bits (88), Expect(2) = 1e-47
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +1
Query: 394 HRSPGYYDGRYWTCGSCPCLDA 459
HRSPGYYDGRYWT P A
Sbjct: 113 HRSPGYYDGRYWTMWRLPLFGA 134
>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Aralia elata]
Length = 183
Score = 195 bits (495), Expect = 1e-47
Identities = 109/188 (57%), Positives = 136/188 (72%), Gaps = 10/188 (5%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 235
MASS++S+A+VA+++RA+PAQA+MVAPFTGLKSTA FP + NDITS+ SNGGRVQCMK
Sbjct: 1 MASSVISSASVAAVSRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMK 60
Query: 236 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENTDHQDTT 415
VWP GLKKFETLSYLPPLT E+LAKEV+YLLRSGWVPCLEFELEHG+VYREN H+
Sbjct: 61 VWPPLGLKKFETLSYLPPLTNEELAKEVDYLLRSGWVPCLEFELEHGWVYREN--HR--- 115
Query: 416 MDATGHVEAAHVWMHR--------RSSVLNELDEALR--PPKWLR*DH*FDSIASACIVH 565
+ G+ + + M + S VLNE++E + P ++R FD++ V
Sbjct: 116 --SPGYYDGRYWTMWKLPMFGCTDSSQVLNEVEECKKEYPNAFIRIIG-FDNVRQ---VQ 169
Query: 566 CYSLRAFK 589
C S AFK
Sbjct: 170 CISFIAFK 177
>sp|P12468.1|RBS4_SOYBN RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
chloroplastic; Short=RuBisCO small subunit 4; Flags:
Precursor gi|170058|gb|AAA34008.1| ribulose
1,5-bisphosphate carboxylase [Glycine max]
gi|225579|prf||1306410A ribulose bisphosphate
carboxylase S
Length = 178
Score = 172 bits (437), Expect(2) = 2e-47
Identities = 86/113 (76%), Positives = 93/113 (82%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 235
MASSM+S+ V ++NRA A MVAPFTGLKS AG P RKT NDITSIASNGGRVQCM+
Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAGLPTRKTNNDITSIASNGGRVQCMQ 57
Query: 236 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYREN 394
VWP G KKFETLSYLP L QLAKEVEYLLR GW+PCLEFELEHGFVYRE+
Sbjct: 58 VWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREH 110
Score = 43.5 bits (101), Expect(2) = 2e-47
Identities = 23/39 (58%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 417 WTLLDMWKLPMFGCTDAVQS*TSLMR-H*GHPNGFVRII 530
WT MWKLPMFGCTDA Q L +PNGF+RII
Sbjct: 122 WT---MWKLPMFGCTDASQVLKELQEAKTAYPNGFIRII 157
>gb|AAF06100.1| ribulose 1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta]
Length = 184
Score = 194 bits (493), Expect = 2e-47
Identities = 111/188 (59%), Positives = 132/188 (70%), Gaps = 10/188 (5%)
Frame = +2
Query: 56 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPAR-KTTNDITSIASNGGRVQCM 232
MA+SMLSTATVASINRASPAQA+MVAPFTGLKST+ F A KT+ DITS+ASNGGRVQCM
Sbjct: 1 MATSMLSTATVASINRASPAQASMVAPFTGLKSTSAFTATTKTSADITSLASNGGRVQCM 60
Query: 233 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENTDHQDT 412
+VWPT+G KKFETLSYLPPL+REQLA E++YLLRSGW+PCLEFELEHGFVYR +
Sbjct: 61 QVWPTRGKKKFETLSYLPPLSREQLASEIDYLLRSGWIPCLEFELEHGFVYRAHG----- 115
Query: 413 TMDATGHVEAAHVWMHR--------RSSVLNELDEALRP-PKWLR*DH*FDSIASACIVH 565
G+ + + M + S VL ELDE ++ P FD++ V
Sbjct: 116 --SLPGYYDGRYWTMWKLPMFGCTDSSQVLKELDELIKAHPDGFARIIGFDNVRQ---VQ 170
Query: 566 CYSLRAFK 589
C S A+K
Sbjct: 171 CISFIAYK 178