BLASTX nr result
ID: Jatropha_contig00011301
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00011301
(673 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subun... 298 1e-78
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai... 263 4e-68
sp|Q42915.1|RBS_MANES RecName: Full=Ribulose bisphosphate carbox... 262 6e-68
sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carbox... 259 5e-67
gb|EMJ16250.1| hypothetical protein PRUPE_ppa012123mg [Prunus pe... 256 3e-66
gb|AAF06098.1| ribulose 1,5-bisphosphate carboxylase small chain... 256 4e-66
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox... 256 5e-66
sp|O22077.1|RBS_FAGCR RecName: Full=Ribulose bisphosphate carbox... 253 3e-65
gb|AAF06100.1| ribulose 1,5-bisphosphate carboxylase small chain... 253 4e-65
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 253 5e-65
gb|AAU14862.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 252 6e-65
gb|ACA42439.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 252 8e-65
gb|ESW23644.1| hypothetical protein PHAVU_004G064800g [Phaseolus... 251 1e-64
gb|AGV54682.1| ribulose bisphosphate carboxylase [Phaseolus vulg... 251 2e-64
emb|CAA42618.1| ribulose bisphosphate carboxylase [Phaseolus vul... 250 3e-64
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun... 249 5e-64
gb|AFK48034.1| unknown [Lotus japonicus] 249 5e-64
ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai... 249 7e-64
gb|EOY04196.1| Ribulose bisphosphate carboxylase (small chain) f... 248 1e-63
gb|AAG24884.1|AF303941_1 ribulose-1,5-bisphosphate carboxylase s... 247 2e-63
>gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subunit [Jatropha
curcas]
Length = 181
Score = 298 bits (762), Expect = 1e-78
Identities = 150/180 (83%), Positives = 157/180 (87%), Gaps = 5/180 (2%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 244
MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIA NGGRVQCMK
Sbjct: 1 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIAGNGGRVQCMK 60
Query: 245 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYY 424
VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYY
Sbjct: 61 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYY 120
Query: 425 DGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIRQLS-----PVQCISFIAY 589
DGRYWTMWKLPMFGCTDAVQ ++ +L + ++R + VQCISFIAY
Sbjct: 121 DGRYWTMWKLPMFGCTDAVQ----VLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAY 176
>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 185
Score = 263 bits (671), Expect = 4e-68
Identities = 133/181 (73%), Positives = 149/181 (82%), Gaps = 6/181 (3%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCM 241
MASSMLSTATVAS+NRASPAQA+MVAPFTGLKST+ FP RKT DIT++A+NGGRVQCM
Sbjct: 1 MASSMLSTATVASLNRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCM 60
Query: 242 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGY 421
+VWP G KKFETLSYLP LTREQLAKEVEYLLR GWVPCLEFELEHGFVYREN RSPGY
Sbjct: 61 QVWPPLGKKKFETLSYLPDLTREQLAKEVEYLLRKGWVPCLEFELEHGFVYRENARSPGY 120
Query: 422 YDGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIR-----QLSPVQCISFIA 586
YDGRYWTMWKLPMFGC+DAVQ ++++L + ++R + VQCISFIA
Sbjct: 121 YDGRYWTMWKLPMFGCSDAVQ----VLKELDEAIKAYPNSFVRIIGFDNVRQVQCISFIA 176
Query: 587 Y 589
Y
Sbjct: 177 Y 177
>sp|Q42915.1|RBS_MANES RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|168363|gb|AAA99429.1| ribulose
1,5-bisphosphate carboxylase [Manihot esculenta]
gi|6272549|gb|AAF06099.1| ribulose 1,5-bisphosphate
carboxylase small chain precursor [Manihot esculenta]
Length = 182
Score = 262 bits (670), Expect = 6e-68
Identities = 134/181 (74%), Positives = 146/181 (80%), Gaps = 6/181 (3%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCM 241
MASSMLSTATVASINR SPAQATMVAPFTGLKST FP RKT +DITSI SNGG+VQCM
Sbjct: 1 MASSMLSTATVASINRVSPAQATMVAPFTGLKSTPVFPTTRKTNSDITSITSNGGKVQCM 60
Query: 242 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGY 421
KVWPT G+KKFETLSYLPPLTREQLA EVEYLLRSGW+PCLEFELEHG VYRE+ R PGY
Sbjct: 61 KVWPTLGMKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGY 120
Query: 422 YDGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIR-----QLSPVQCISFIA 586
YDGRYWTMWKLPMFGCTDA Q ++++L D + R + VQCISF+A
Sbjct: 121 YDGRYWTMWKLPMFGCTDAAQ----VLKELDELIKHHPDGYARIIGFDNVRQVQCISFLA 176
Query: 587 Y 589
Y
Sbjct: 177 Y 177
>sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|168217|gb|AAA33361.1|
ribulose-1,5-bisphosphate carboxylase small subunit
[Hevea brasiliensis]
Length = 183
Score = 259 bits (662), Expect = 5e-67
Identities = 133/177 (75%), Positives = 143/177 (80%), Gaps = 2/177 (1%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCM 241
MASSMLSTA VA INRASPAQA+MVAPFTGLKST+ FP RKTT DITSIASNGGRVQCM
Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCM 60
Query: 242 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGY 421
+VWP +G K +ETLSYLPPLTREQLAKEVEYLLR GWVPCLEFELEHG VYRE +RSPGY
Sbjct: 61 QVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGY 120
Query: 422 YDGRYWTMWKLPMFGCTDAVQS*TSLMRQLSS-PKWLR*DHWIRQLSPVQCISFIAY 589
YDGRYWTMWKLPMFGCTDAVQ L + + P + VQCISF+AY
Sbjct: 121 YDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAY 177
>gb|EMJ16250.1| hypothetical protein PRUPE_ppa012123mg [Prunus persica]
Length = 183
Score = 256 bits (655), Expect = 3e-66
Identities = 129/182 (70%), Positives = 148/182 (81%), Gaps = 7/182 (3%)
Frame = +2
Query: 65 MASSMLSTATVASI--NRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQC 238
MASSM+S+ATVAS+ +RA+PAQA++VAPFTGLKS + FP K TNDITSIASNGGRVQC
Sbjct: 1 MASSMISSATVASVYADRAAPAQASLVAPFTGLKSASAFPGAKKTNDITSIASNGGRVQC 60
Query: 239 MKVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPG 418
MKVWPT GLKKFETLSYLPPL+ E LAKEV+YLLR WVPCLEFELE GFVYREN+RSPG
Sbjct: 61 MKVWPTVGLKKFETLSYLPPLSPESLAKEVDYLLRKNWVPCLEFELEKGFVYRENHRSPG 120
Query: 419 YYDGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIR-----QLSPVQCISFI 583
YYDGRYWTMWKLPMFGCTD+ Q ++++L K + +IR + VQCISFI
Sbjct: 121 YYDGRYWTMWKLPMFGCTDSSQ----VLKELEEAKKANPNSFIRIIGFDNVRQVQCISFI 176
Query: 584 AY 589
AY
Sbjct: 177 AY 178
>gb|AAF06098.1| ribulose 1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta] gi|6272551|gb|AAF06101.1| ribulose
1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta]
Length = 184
Score = 256 bits (654), Expect = 4e-66
Identities = 129/181 (71%), Positives = 148/181 (81%), Gaps = 6/181 (3%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPAR-KTTNDITSIASNGGRVQCM 241
MA+SMLSTATVASINRASPAQA+MVAPFTGLKST+ FPA KT+ DITS+ASNGGRVQCM
Sbjct: 1 MATSMLSTATVASINRASPAQASMVAPFTGLKSTSAFPATTKTSADITSLASNGGRVQCM 60
Query: 242 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGY 421
+VWPT+G KKFETLSYLPPL+REQLA E++YLLRSGW+PCLEFELEHGFVYR + PGY
Sbjct: 61 QVWPTRGKKKFETLSYLPPLSREQLASEIDYLLRSGWIPCLEFELEHGFVYRAHGSLPGY 120
Query: 422 YDGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIR-----QLSPVQCISFIA 586
YDGRYWTMWKLPMFGCTD+ Q ++++L D + R + VQCISFIA
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQ----VLKELDELIKAHPDGFARIIGFDNVRQVQCISFIA 176
Query: 587 Y 589
Y
Sbjct: 177 Y 177
>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Aralia elata]
Length = 183
Score = 256 bits (653), Expect = 5e-66
Identities = 125/180 (69%), Positives = 149/180 (82%), Gaps = 5/180 (2%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 244
MASS++S+A+VA+++RA+PAQA+MVAPFTGLKSTA FP + NDITS+ SNGGRVQCMK
Sbjct: 1 MASSVISSASVAAVSRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMK 60
Query: 245 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYY 424
VWP GLKKFETLSYLPPLT E+LAKEV+YLLRSGWVPCLEFELEHG+VYREN+RSPGYY
Sbjct: 61 VWPPLGLKKFETLSYLPPLTNEELAKEVDYLLRSGWVPCLEFELEHGWVYRENHRSPGYY 120
Query: 425 DGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIR-----QLSPVQCISFIAY 589
DGRYWTMWKLPMFGCTD+ Q ++ ++ K + +IR + VQCISFIA+
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQ----VLNEVEECKKEYPNAFIRIIGFDNVRQVQCISFIAF 176
>sp|O22077.1|RBS_FAGCR RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|2588890|dbj|BAA23214.1| small subunit of
ribulose-1,5-bisphosphate carboxylase/oxygenase [Fagus
crenata]
Length = 182
Score = 253 bits (647), Expect = 3e-65
Identities = 127/181 (70%), Positives = 145/181 (80%), Gaps = 6/181 (3%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCM 241
MASSM+S+ATVA+++RA+PAQATMVAPFTGLKSTA FPA RK+ NDITS+ASNGGRVQCM
Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCM 60
Query: 242 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGY 421
KVWP GL+KFETLSYLPPL+ E LAK++EYL+ GW+PCLEFELEH FVYRENNRSPGY
Sbjct: 61 KVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGY 120
Query: 422 YDGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIRQLS-----PVQCISFIA 586
YDGRYW MWKLPMFGCTDA T ++ +L IR + VQCISFIA
Sbjct: 121 YDGRYWVMWKLPMFGCTDA----TQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISFIA 176
Query: 587 Y 589
Y
Sbjct: 177 Y 177
>gb|AAF06100.1| ribulose 1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta]
Length = 184
Score = 253 bits (646), Expect = 4e-65
Identities = 128/181 (70%), Positives = 147/181 (81%), Gaps = 6/181 (3%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPAR-KTTNDITSIASNGGRVQCM 241
MA+SMLSTATVASINRASPAQA+MVAPFTGLKST+ F A KT+ DITS+ASNGGRVQCM
Sbjct: 1 MATSMLSTATVASINRASPAQASMVAPFTGLKSTSAFTATTKTSADITSLASNGGRVQCM 60
Query: 242 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGY 421
+VWPT+G KKFETLSYLPPL+REQLA E++YLLRSGW+PCLEFELEHGFVYR + PGY
Sbjct: 61 QVWPTRGKKKFETLSYLPPLSREQLASEIDYLLRSGWIPCLEFELEHGFVYRAHGSLPGY 120
Query: 422 YDGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIR-----QLSPVQCISFIA 586
YDGRYWTMWKLPMFGCTD+ Q ++++L D + R + VQCISFIA
Sbjct: 121 YDGRYWTMWKLPMFGCTDSSQ----VLKELDELIKAHPDGFARIIGFDNVRQVQCISFIA 176
Query: 587 Y 589
Y
Sbjct: 177 Y 177
>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Panax ginseng]
Length = 183
Score = 253 bits (645), Expect = 5e-65
Identities = 124/180 (68%), Positives = 148/180 (82%), Gaps = 5/180 (2%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 244
MASS++S+ATVA+++RA PAQA+MVAPFTGLKSTA FP + NDITS+ SNGGRVQCMK
Sbjct: 1 MASSVISSATVAAVSRAVPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMK 60
Query: 245 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYY 424
VWP GLKKFETLSYLP LT+EQL+KEV+YLLRSGWVPCLEFELEHGFVYRE++ SPGYY
Sbjct: 61 VWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYY 120
Query: 425 DGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIR-----QLSPVQCISFIAY 589
DGRYWTMWKLPMFGCTD+ Q +++++ K + +IR + VQCISFIA+
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQ----VLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAF 176
>gb|AAU14862.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Fagus sylvatica]
Length = 181
Score = 252 bits (644), Expect = 6e-65
Identities = 126/181 (69%), Positives = 145/181 (80%), Gaps = 6/181 (3%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCM 241
MASSM+S+ATVA+++RA+PAQATMVAPFTGLKSTA FPA +K+ NDITS+ASNGGRVQCM
Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATQKSNNDITSLASNGGRVQCM 60
Query: 242 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGY 421
KVWP GL+KFETLSYLPPL+ E LAK++EYL+ GW+PCLEFELEH FVYRENNRSPGY
Sbjct: 61 KVWPPLGLQKFETLSYLPPLSLESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGY 120
Query: 422 YDGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIRQLS-----PVQCISFIA 586
YDGRYW MWKLPMFGCTDA T ++ +L IR + VQCISFIA
Sbjct: 121 YDGRYWVMWKLPMFGCTDA----TQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISFIA 176
Query: 587 Y 589
Y
Sbjct: 177 Y 177
>gb|ACA42439.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Hevea brasiliensis]
Length = 183
Score = 252 bits (643), Expect = 8e-65
Identities = 130/177 (73%), Positives = 139/177 (78%), Gaps = 2/177 (1%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCM 241
MASSMLSTA VA INRASPAQA+MVAPFTGLKST+ FP RKTT DITSIASNGGRVQCM
Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCM 60
Query: 242 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGY 421
+VWP +G K FET YLPPLTREQLAKEVEYL GWVPCLEFELEHG VYRE +RSPGY
Sbjct: 61 QVWPPRGKKFFETFLYLPPLTREQLAKEVEYLFCKGWVPCLEFELEHGTVYREYHRSPGY 120
Query: 422 YDGRYWTMWKLPMFGCTDAVQS*TSLMRQLSS-PKWLR*DHWIRQLSPVQCISFIAY 589
YDGRYWTMWKLPMFGCTDAVQ L + + P + VQCISF+AY
Sbjct: 121 YDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAY 177
>gb|ESW23644.1| hypothetical protein PHAVU_004G064800g [Phaseolus vulgaris]
gi|561024960|gb|ESW23645.1| hypothetical protein
PHAVU_004G064900g [Phaseolus vulgaris]
Length = 180
Score = 251 bits (641), Expect = 1e-64
Identities = 124/180 (68%), Positives = 145/180 (80%), Gaps = 5/180 (2%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 244
MASSM+S+ V ++NRA A A MVAPFTGLKS GFP+RK NDITS+A+NGGRVQC++
Sbjct: 1 MASSMISSPAVTTVNRAG-AGAGMVAPFTGLKSLGGFPSRKMNNDITSVANNGGRVQCIQ 59
Query: 245 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYY 424
VWPT G KKFETLSYLPPLT+EQLAKEV+YLLR GWVPCLEFELEHGFVYRE+N+SPGYY
Sbjct: 60 VWPTVGKKKFETLSYLPPLTKEQLAKEVDYLLRKGWVPCLEFELEHGFVYREHNKSPGYY 119
Query: 425 DGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIR-----QLSPVQCISFIAY 589
DGRYWTMWKLPMFGCTD+ Q ++++L + D +IR + VQCISFIAY
Sbjct: 120 DGRYWTMWKLPMFGCTDSSQ----VLKELYEAQTAHPDGFIRIIGFDNVRQVQCISFIAY 175
>gb|AGV54682.1| ribulose bisphosphate carboxylase [Phaseolus vulgaris]
Length = 180
Score = 251 bits (640), Expect = 2e-64
Identities = 124/180 (68%), Positives = 145/180 (80%), Gaps = 5/180 (2%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 244
MASSM+S+ V ++NRA A A MVAPFTGLKS GFP+RK NDITS+A+NGGRVQC++
Sbjct: 1 MASSMISSPAVTTVNRAG-AGAGMVAPFTGLKSLGGFPSRKMNNDITSVANNGGRVQCIQ 59
Query: 245 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYY 424
VWPT G KKFETLSYLPPLT+EQLAKEV+YLLR GWVPCLEFELEHGFVYRE+N+SPGYY
Sbjct: 60 VWPTVGKKKFETLSYLPPLTQEQLAKEVDYLLRKGWVPCLEFELEHGFVYREHNKSPGYY 119
Query: 425 DGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIR-----QLSPVQCISFIAY 589
DGRYWTMWKLPMFGCTD+ Q ++++L + D +IR + VQCISFIAY
Sbjct: 120 DGRYWTMWKLPMFGCTDSSQ----VLKELYEAQTAHPDGFIRIIGFDNVRQVQCISFIAY 175
>emb|CAA42618.1| ribulose bisphosphate carboxylase [Phaseolus vulgaris]
gi|21053|emb|CAA40339.1| small subunit of ribulose
1,5-bisphosphate carboxylase/oxygenase [Phaseolus
vulgaris]
Length = 180
Score = 250 bits (638), Expect = 3e-64
Identities = 123/180 (68%), Positives = 145/180 (80%), Gaps = 5/180 (2%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 244
MASSM+S+ V ++NRA A A MVAPFTGLKS GFP+RK NDITS+A+NGGRVQC++
Sbjct: 1 MASSMISSPAVTTVNRAG-AGAGMVAPFTGLKSLGGFPSRKMNNDITSVANNGGRVQCIQ 59
Query: 245 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYY 424
VWPT G KKFETLSYLPPLT++QLAKEV+YLLR GWVPCLEFELEHGFVYRE+N+SPGYY
Sbjct: 60 VWPTVGKKKFETLSYLPPLTKQQLAKEVDYLLRKGWVPCLEFELEHGFVYREHNKSPGYY 119
Query: 425 DGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIR-----QLSPVQCISFIAY 589
DGRYWTMWKLPMFGCTD+ Q ++++L + D +IR + VQCISFIAY
Sbjct: 120 DGRYWTMWKLPMFGCTDSSQ----VLKELYEAQTAHPDGFIRIIGFDNVRQVQCISFIAY 175
>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus
domestica x Pyrus communis]
Length = 179
Score = 249 bits (636), Expect = 5e-64
Identities = 124/180 (68%), Positives = 144/180 (80%), Gaps = 5/180 (2%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 244
MASSM+S+ TVA+++ +PAQA MVAPFTGLKS++ FP + +NDITSIASNGGRVQCM+
Sbjct: 1 MASSMISSGTVATVS--APAQARMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQ 58
Query: 245 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYY 424
VWP GLKKFETLSYLPPL+ E LAKEV+YLLR WVPCLEFELEHGFVYRENNRSPGYY
Sbjct: 59 VWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENNRSPGYY 118
Query: 425 DGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIR-----QLSPVQCISFIAY 589
DGRYWTMWKLPMFGCTD+ Q ++++L K +IR + VQCISFIAY
Sbjct: 119 DGRYWTMWKLPMFGCTDSSQ----VLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAY 174
>gb|AFK48034.1| unknown [Lotus japonicus]
Length = 181
Score = 249 bits (636), Expect = 5e-64
Identities = 123/180 (68%), Positives = 142/180 (78%), Gaps = 5/180 (2%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 244
MASSM++++ V +IN ASPAQA MVAPFTGLKS AGFP RK NDITSIA+NGGRVQCM+
Sbjct: 1 MASSMITSSAVTTINSASPAQANMVAPFTGLKSMAGFPVRKVNNDITSIANNGGRVQCMQ 60
Query: 245 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYY 424
VWP G KKFETLSYLPPLT EQL KEVEYLLR GWVPCLEFE E GFVYREN++SPGYY
Sbjct: 61 VWPPIGKKKFETLSYLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYY 120
Query: 425 DGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIR-----QLSPVQCISFIAY 589
DGRYWTMWKLPMFGC+DA T ++++L + ++R + VQCISFIA+
Sbjct: 121 DGRYWTMWKLPMFGCSDA----TQVLKELDEAVKAYPNAFVRIIGFDNVRQVQCISFIAH 176
>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
precursor, putative [Ricinus communis]
gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
carboxylase small chain 1B, chloroplast precursor,
putative [Ricinus communis]
Length = 181
Score = 249 bits (635), Expect = 7e-64
Identities = 127/181 (70%), Positives = 145/181 (80%), Gaps = 6/181 (3%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCM 241
MASSM+S+A S++R+SPAQATMVAPFTGLKS A FP RK NDITSIASNGGRVQCM
Sbjct: 1 MASSMISSA---SVSRSSPAQATMVAPFTGLKSAASFPVTRKANNDITSIASNGGRVQCM 57
Query: 242 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGY 421
+VWP G KKFETLSYLP LT EQLAKEV+YLLR GW+PCLEFELEHGFVYREN+RSPGY
Sbjct: 58 QVWPPLGKKKFETLSYLPDLTDEQLAKEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGY 117
Query: 422 YDGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIRQLS-----PVQCISFIA 586
YDGRYWTMWKLPMFGC+D+ T ++++L K + +IR + VQCISFIA
Sbjct: 118 YDGRYWTMWKLPMFGCSDS----TQVLKELDEAKKAYPNSFIRIIGFDNRRQVQCISFIA 173
Query: 587 Y 589
Y
Sbjct: 174 Y 174
>gb|EOY04196.1| Ribulose bisphosphate carboxylase (small chain) family protein
isoform 2 [Theobroma cacao]
Length = 184
Score = 248 bits (632), Expect = 1e-63
Identities = 128/181 (70%), Positives = 144/181 (79%), Gaps = 6/181 (3%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFP-ARKTTNDITSIASNGGRVQCM 241
MASSM+S+ATVA++NRASPAQA+MVAPFTGLKST+ P ARK NDITS+ASNGGRVQCM
Sbjct: 1 MASSMISSATVATVNRASPAQASMVAPFTGLKSTSALPVARKANNDITSLASNGGRVQCM 60
Query: 242 KVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGY 421
+VWP G KKFETLSYLP LTRE+L KEVEYLLR+ WVPCLEFELEHGFVYREN R PGY
Sbjct: 61 QVWPPLGKKKFETLSYLPDLTRERLFKEVEYLLRNKWVPCLEFELEHGFVYRENLRIPGY 120
Query: 422 YDGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIRQLS-----PVQCISFIA 586
YDGR W MWKLPMFGCTDA Q ++++L K +IR + VQCISFIA
Sbjct: 121 YDGRCWIMWKLPMFGCTDASQ----VLKELDEAKKTYPTAFIRIIGFDNRRQVQCISFIA 176
Query: 587 Y 589
Y
Sbjct: 177 Y 177
>gb|AAG24884.1|AF303941_1 ribulose-1,5-bisphosphate carboxylase small subunit rbcS3 [Glycine
max]
Length = 178
Score = 247 bits (631), Expect = 2e-63
Identities = 126/180 (70%), Positives = 140/180 (77%), Gaps = 5/180 (2%)
Frame = +2
Query: 65 MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMK 244
MASSM+S+ V ++NRA A MVAPFTGLKS AGFP RKT NDITSIASNGGRVQCM+
Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQ 57
Query: 245 VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYY 424
VWP G KKFETLSYLP L QLAKEVEYLLR GW+PCLEFELEHGFVYRE+NRSPGYY
Sbjct: 58 VWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSPGYY 117
Query: 425 DGRYWTMWKLPMFGCTDAVQS*TSLMRQLSSPKWLR*DHWIR-----QLSPVQCISFIAY 589
DGRYWTMWKLPMFGCTDA Q ++++L K + +IR + VQCISFIAY
Sbjct: 118 DGRYWTMWKLPMFGCTDASQ----VLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAY 173