BLASTX nr result
ID: Jatropha_contig00011298
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00011298
(644 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subun... 168 1e-39
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai... 146 4e-33
gb|AAG24884.1|AF303941_1 ribulose-1,5-bisphosphate carboxylase s... 143 4e-32
ref|NP_001241137.1| ribulose bisphosphate carboxylase small chai... 143 4e-32
ref|NP_001235266.1| ribulose-1,5-bisphosphate carboxylase small ... 143 4e-32
ref|NP_001235314.1| uncharacterized protein LOC100500504 [Glycin... 143 4e-32
gb|ACU13285.1| unknown [Glycine max] 143 4e-32
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun... 143 5e-32
ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai... 141 1e-31
sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carbox... 140 2e-31
sp|P00865.1|RBS1_SOYBN RecName: Full=Ribulose bisphosphate carbo... 140 2e-31
gb|ESW23765.1| hypothetical protein PHAVU_004G073400g, partial [... 140 3e-31
gb|ESW23644.1| hypothetical protein PHAVU_004G064800g [Phaseolus... 140 3e-31
gb|AGV54682.1| ribulose bisphosphate carboxylase [Phaseolus vulg... 140 3e-31
emb|CAA42617.1| ribulose bisphosphate carboxylase [Phaseolus vul... 140 3e-31
emb|CAA42618.1| ribulose bisphosphate carboxylase [Phaseolus vul... 140 3e-31
pdb|3RUB|S Chain S, Crystal Structure Of The Unactivated Form Of... 140 3e-31
gb|AAA34111.1| ribulose-1,5-bisphosphate carboxylase, partial [N... 140 3e-31
sp|P22433.1|RBS2_NICSY RecName: Full=Ribulose bisphosphate carbo... 140 3e-31
ref|XP_006363111.1| PREDICTED: ribulose bisphosphate carboxylase... 140 3e-31
>gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subunit [Jatropha
curcas]
Length = 181
Score = 168 bits (425), Expect = 1e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY
Sbjct: 106 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 165
Query: 291 RQVQCISFIAYKPKGL 244
RQVQCISFIAYKPKGL
Sbjct: 166 RQVQCISFIAYKPKGL 181
>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 185
Score = 146 bits (369), Expect = 4e-33
Identities = 66/73 (90%), Positives = 69/73 (94%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYREN RSPGYYDGRYWTMWKLPMFGC+DAVQVL ELDEAIKA+PN FVRIIGFD+
Sbjct: 107 HGFVYRENARSPGYYDGRYWTMWKLPMFGCSDAVQVLKELDEAIKAYPNSFVRIIGFDNV 166
Query: 291 RQVQCISFIAYKP 253
RQVQCISFIAYKP
Sbjct: 167 RQVQCISFIAYKP 179
>gb|AAG24884.1|AF303941_1 ribulose-1,5-bisphosphate carboxylase small subunit rbcS3 [Glycine
max]
Length = 178
Score = 143 bits (361), Expect = 4e-32
Identities = 64/75 (85%), Positives = 68/75 (90%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRE+NRSPGYYDGRYWTMWKLPMFGCTDA QVL EL EA A+PNGF+RIIGFD+
Sbjct: 103 HGFVYREHNRSPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNV 162
Query: 291 RQVQCISFIAYKPKG 247
RQVQCISFIAYKP G
Sbjct: 163 RQVQCISFIAYKPPG 177
>ref|NP_001241137.1| ribulose bisphosphate carboxylase small chain 1, chloroplastic-like
[Glycine max] gi|10946375|gb|AAG24882.1|AF303939_1
ribulose-1,5-bisphosphate carboxylase small subunit
rbcS1 [Glycine max] gi|1055368|gb|AAA81328.1|
ribulose-1,5-bisphosphate carboxylase small subunit
[Glycine max]
Length = 178
Score = 143 bits (361), Expect = 4e-32
Identities = 64/75 (85%), Positives = 68/75 (90%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRE+NRSPGYYDGRYWTMWKLPMFGCTDA QVL EL EA A+PNGF+RIIGFD+
Sbjct: 103 HGFVYREHNRSPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNV 162
Query: 291 RQVQCISFIAYKPKG 247
RQVQCISFIAYKP G
Sbjct: 163 RQVQCISFIAYKPPG 177
>ref|NP_001235266.1| ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 [Glycine
max] gi|10946377|gb|AAG24883.1|AF303940_1
ribulose-1,5-bisphosphate carboxylase small subunit
rbcS2 [Glycine max]
Length = 178
Score = 143 bits (361), Expect = 4e-32
Identities = 64/75 (85%), Positives = 68/75 (90%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRE+NRSPGYYDGRYWTMWKLPMFGCTDA QVL EL EA A+PNGF+RIIGFD+
Sbjct: 103 HGFVYREHNRSPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNV 162
Query: 291 RQVQCISFIAYKPKG 247
RQVQCISFIAYKP G
Sbjct: 163 RQVQCISFIAYKPPG 177
>ref|NP_001235314.1| uncharacterized protein LOC100500504 [Glycine max]
gi|255630492|gb|ACU15604.1| unknown [Glycine max]
Length = 178
Score = 143 bits (361), Expect = 4e-32
Identities = 64/75 (85%), Positives = 68/75 (90%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRE+NRSPGYYDGRYWTMWKLPMFGCTDA QVL EL EA A+PNGF+RIIGFD+
Sbjct: 103 HGFVYREHNRSPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNV 162
Query: 291 RQVQCISFIAYKPKG 247
RQVQCISFIAYKP G
Sbjct: 163 RQVQCISFIAYKPPG 177
>gb|ACU13285.1| unknown [Glycine max]
Length = 178
Score = 143 bits (361), Expect = 4e-32
Identities = 64/75 (85%), Positives = 68/75 (90%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRE+NRSPGYYDGRYWTMWKLPMFGCTDA QVL EL EA A+PNGF+RIIGFD+
Sbjct: 103 HGFVYREHNRSPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNV 162
Query: 291 RQVQCISFIAYKPKG 247
RQVQCISFIAYKP G
Sbjct: 163 RQVQCISFIAYKPPG 177
>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus
domestica x Pyrus communis]
Length = 179
Score = 143 bits (360), Expect = 5e-32
Identities = 63/76 (82%), Positives = 69/76 (90%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTD+ QVL EL+EA KA+P F+RIIGFD+
Sbjct: 104 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNV 163
Query: 291 RQVQCISFIAYKPKGL 244
RQVQCISFIAYKP G+
Sbjct: 164 RQVQCISFIAYKPPGV 179
>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
precursor, putative [Ricinus communis]
gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
carboxylase small chain 1B, chloroplast precursor,
putative [Ricinus communis]
Length = 181
Score = 141 bits (356), Expect = 1e-31
Identities = 62/73 (84%), Positives = 68/73 (93%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYREN+RSPGYYDGRYWTMWKLPMFGC+D+ QVL ELDEA KA+PN F+RIIGFD+
Sbjct: 104 HGFVYRENHRSPGYYDGRYWTMWKLPMFGCSDSTQVLKELDEAKKAYPNSFIRIIGFDNR 163
Query: 291 RQVQCISFIAYKP 253
RQVQCISFIAYKP
Sbjct: 164 RQVQCISFIAYKP 176
>sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|19581|emb|CAA46475.1| ribulose bisphosphate
carboxylase [Malus sp.]
Length = 183
Score = 140 bits (354), Expect = 2e-31
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYREN+RSPGYYDGRYWTMWKLPMFGCTD+ QVL EL+EA KA+P F+RIIGFD+
Sbjct: 108 HGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNV 167
Query: 291 RQVQCISFIAYKPKG 247
RQVQCISFIAYKP G
Sbjct: 168 RQVQCISFIAYKPAG 182
>sp|P00865.1|RBS1_SOYBN RecName: Full=Ribulose bisphosphate carboxylase small chain 1,
chloroplastic; Short=RuBisCO small subunit 1; Flags:
Precursor gi|18742|emb|CAA23736.1| rubpcase [Glycine
max]
Length = 178
Score = 140 bits (354), Expect = 2e-31
Identities = 63/75 (84%), Positives = 67/75 (89%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRE+NRSP YYDGRYWTMWKLPMFGCTDA QVL EL EA A+PNGF+RIIGFD+
Sbjct: 103 HGFVYREHNRSPXYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNV 162
Query: 291 RQVQCISFIAYKPKG 247
RQVQCISFIAYKP G
Sbjct: 163 RQVQCISFIAYKPPG 177
>gb|ESW23765.1| hypothetical protein PHAVU_004G073400g, partial [Phaseolus
vulgaris]
Length = 121
Score = 140 bits (353), Expect = 3e-31
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRE+N+SPGYYDGRYWTMWKLPMFGCTD+ QVL EL EA AHP+GF+RIIGFD+
Sbjct: 46 HGFVYREHNKSPGYYDGRYWTMWKLPMFGCTDSSQVLKELYEAQTAHPDGFIRIIGFDNV 105
Query: 291 RQVQCISFIAYKPKG 247
RQVQCISFIAYKP G
Sbjct: 106 RQVQCISFIAYKPPG 120
>gb|ESW23644.1| hypothetical protein PHAVU_004G064800g [Phaseolus vulgaris]
gi|561024960|gb|ESW23645.1| hypothetical protein
PHAVU_004G064900g [Phaseolus vulgaris]
Length = 180
Score = 140 bits (353), Expect = 3e-31
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRE+N+SPGYYDGRYWTMWKLPMFGCTD+ QVL EL EA AHP+GF+RIIGFD+
Sbjct: 105 HGFVYREHNKSPGYYDGRYWTMWKLPMFGCTDSSQVLKELYEAQTAHPDGFIRIIGFDNV 164
Query: 291 RQVQCISFIAYKPKG 247
RQVQCISFIAYKP G
Sbjct: 165 RQVQCISFIAYKPPG 179
>gb|AGV54682.1| ribulose bisphosphate carboxylase [Phaseolus vulgaris]
Length = 180
Score = 140 bits (353), Expect = 3e-31
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRE+N+SPGYYDGRYWTMWKLPMFGCTD+ QVL EL EA AHP+GF+RIIGFD+
Sbjct: 105 HGFVYREHNKSPGYYDGRYWTMWKLPMFGCTDSSQVLKELYEAQTAHPDGFIRIIGFDNV 164
Query: 291 RQVQCISFIAYKPKG 247
RQVQCISFIAYKP G
Sbjct: 165 RQVQCISFIAYKPPG 179
>emb|CAA42617.1| ribulose bisphosphate carboxylase [Phaseolus vulgaris]
Length = 135
Score = 140 bits (353), Expect = 3e-31
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRE+N+SPGYYDGRYWTMWKLPMFGCTD+ QVL EL EA AHP+GF+RIIGFD+
Sbjct: 60 HGFVYREHNKSPGYYDGRYWTMWKLPMFGCTDSSQVLKELYEAQTAHPDGFIRIIGFDNV 119
Query: 291 RQVQCISFIAYKPKG 247
RQVQCISFIAYKP G
Sbjct: 120 RQVQCISFIAYKPPG 134
>emb|CAA42618.1| ribulose bisphosphate carboxylase [Phaseolus vulgaris]
gi|21053|emb|CAA40339.1| small subunit of ribulose
1,5-bisphosphate carboxylase/oxygenase [Phaseolus
vulgaris]
Length = 180
Score = 140 bits (353), Expect = 3e-31
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRE+N+SPGYYDGRYWTMWKLPMFGCTD+ QVL EL EA AHP+GF+RIIGFD+
Sbjct: 105 HGFVYREHNKSPGYYDGRYWTMWKLPMFGCTDSSQVLKELYEAQTAHPDGFIRIIGFDNV 164
Query: 291 RQVQCISFIAYKPKG 247
RQVQCISFIAYKP G
Sbjct: 165 RQVQCISFIAYKPPG 179
>pdb|3RUB|S Chain S, Crystal Structure Of The Unactivated Form Of
Ribulose-1,5-Bisphosphate Carboxylase(Slash)oxygenase
From Tobacco Refined At 2.0-Angstroms Resolution
gi|443238|pdb|1RLC|S Chain S, Crystal Structure Of The
Unactivated Ribulose 1, 5-Bisphosphate
Carboxylase(Slash)oxygenase Complexed With A Transition
State Analog, 2-Carboxy-D-Arabinitol 1,5-Bisphosphate
gi|515240|pdb|1RLD|S Chain S, Solid-State Phase
Transition In The Crystal Structure Of Ribulose 1,5-
Biphosphate Carboxylase(Slash)oxygenase
gi|515242|pdb|1RLD|T Chain T, Solid-State Phase
Transition In The Crystal Structure Of Ribulose 1,5-
Biphosphate Carboxylase(Slash)oxygenase
gi|7546556|pdb|1EJ7|S Chain S, Crystal Structure Of
Unactivated Tobacco Rubisco With Bound Phosphate Ions
Length = 123
Score = 140 bits (353), Expect = 3e-31
Identities = 61/75 (81%), Positives = 69/75 (92%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRENN+SPGYYDGRYWTMWKLPMFGCTDA QVL E++EA KA+P ++RIIGFD+
Sbjct: 48 HGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNV 107
Query: 291 RQVQCISFIAYKPKG 247
RQVQCISFIAYKP+G
Sbjct: 108 RQVQCISFIAYKPEG 122
>gb|AAA34111.1| ribulose-1,5-bisphosphate carboxylase, partial [Nicotiana
sylvestris] gi|223650|prf||0905192A carboxylase,RBP
Length = 86
Score = 140 bits (353), Expect = 3e-31
Identities = 61/75 (81%), Positives = 69/75 (92%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRENN+SPGYYDGRYWTMWKLPMFGCTDA QVL E++EA KA+P ++RIIGFD+
Sbjct: 11 HGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNV 70
Query: 291 RQVQCISFIAYKPKG 247
RQVQCISFIAYKP+G
Sbjct: 71 RQVQCISFIAYKPEG 85
>sp|P22433.1|RBS2_NICSY RecName: Full=Ribulose bisphosphate carboxylase small chain S41,
chloroplastic; Short=RuBisCO small subunit S41; Flags:
Precursor gi|295823|emb|CAA37516.1| NySS41 [Nicotiana
sylvestris]
Length = 181
Score = 140 bits (353), Expect = 3e-31
Identities = 61/75 (81%), Positives = 69/75 (92%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRENN+SPGYYDGRYWTMWKLPMFGCTDA QVL E++EA KA+P ++RIIGFD+
Sbjct: 106 HGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNV 165
Query: 291 RQVQCISFIAYKPKG 247
RQVQCISFIAYKP+G
Sbjct: 166 RQVQCISFIAYKPEG 180
>ref|XP_006363111.1| PREDICTED: ribulose bisphosphate carboxylase small chain 2C,
chloroplastic-like [Solanum tuberosum]
gi|565394940|ref|XP_006363112.1| PREDICTED: ribulose
bisphosphate carboxylase small chain 2C,
chloroplastic-like [Solanum tuberosum]
gi|132125|sp|P26577.1|RBSC_SOLTU RecName: Full=Ribulose
bisphosphate carboxylase small chain 2C, chloroplastic;
Short=RuBisCO small subunit 2C; Flags: Precursor
gi|21569|emb|CAA49416.1| ribulose bisphosphate
carboxylase [Solanum tuberosum]
Length = 180
Score = 140 bits (353), Expect = 3e-31
Identities = 61/75 (81%), Positives = 69/75 (92%)
Frame = -3
Query: 471 HGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSY 292
HGFVYRENN+SPGYYDGRYWTMWKLPMFGCTDA QVL E++EA KA+P ++RIIGFD+
Sbjct: 105 HGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNV 164
Query: 291 RQVQCISFIAYKPKG 247
RQVQCISFIAYKP+G
Sbjct: 165 RQVQCISFIAYKPEG 179