BLASTX nr result

ID: Jatropha_contig00011278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00011278
         (350 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352013.1| PREDICTED: chlorophyll a-b binding protein 3...   109   3e-22
ref|XP_004251540.1| PREDICTED: chlorophyll a-b binding protein 3...   109   3e-22
sp|P14279.1|CB25_SOLLC RecName: Full=Chlorophyll a-b binding pro...   109   3e-22
emb|CAA52750.1| chlorophyll a/b binding protein [Amaranthus hypo...   109   3e-22
emb|CAA84525.1| chlorophyll a,b binding protein type I [Solanum ...   109   3e-22
sp|P15192.1|CB22_PINSY RecName: Full=Chlorophyll a-b binding pro...   108   7e-22
gb|ERM99607.1| hypothetical protein AMTR_s00088p00153020 [Ambore...   108   9e-22
gb|AAB19040.1| type 2 light-harvesting chlorophyll a/b-binding p...   108   9e-22
emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta]      108   9e-22
sp|P27518.2|CB21_GOSHI RecName: Full=Chlorophyll a-b binding pro...   108   9e-22
emb|CAA74179.1| chlorophyll a/b-binding protein [Beta vulgaris s...   108   9e-22
sp|P10049.1|CB21_PINTH RecName: Full=Chlorophyll a-b binding pro...   108   9e-22
emb|CBI28419.3| unnamed protein product [Vitis vinifera]              108   9e-22
ref|XP_002271687.1| PREDICTED: chlorophyll a-b binding protein 1...   108   9e-22
gb|ABF70157.1| chlorophyll A-B binding protein (CAB), putative [...   108   9e-22
gb|AAV74408.1| chloroplast chlorophyll A/B binding protein [Mani...   108   9e-22
emb|CAA43907.1| chlorophyll a/b-binding protein [Pinus thunbergii]    108   9e-22
prf||1615137A chlorophyll a/b binding protein P25                     108   9e-22
emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta]      108   9e-22
ref|XP_006363015.1| PREDICTED: chlorophyll a-b binding protein 4...   107   2e-21

>ref|XP_006352013.1| PREDICTED: chlorophyll a-b binding protein 37, chloroplastic-like
           [Solanum tuberosum]
          Length = 265

 Score =  109 bits (273), Expect = 3e-22
 Identities = 52/63 (82%), Positives = 55/63 (87%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENLSDH+ADPVANNAWAYATNFV
Sbjct: 203 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFV 262

Query: 169 PGK 161
           PGK
Sbjct: 263 PGK 265


>ref|XP_004251540.1| PREDICTED: chlorophyll a-b binding protein 37, chloroplastic
           [Solanum lycopersicum]
          Length = 265

 Score =  109 bits (273), Expect = 3e-22
 Identities = 52/63 (82%), Positives = 55/63 (87%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENLSDH+ADPVANNAWAYATNFV
Sbjct: 203 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFV 262

Query: 169 PGK 161
           PGK
Sbjct: 263 PGK 265


>sp|P14279.1|CB25_SOLLC RecName: Full=Chlorophyll a-b binding protein 5, chloroplastic;
           AltName: Full=LHCII type I CAB-5; Short=LHCP; Flags:
           Precursor gi|170392|gb|AAA34142.1| chlorophyll
           a/b-binding protein precursor, partial [Solanum
           lycopersicum]
          Length = 237

 Score =  109 bits (273), Expect = 3e-22
 Identities = 52/63 (82%), Positives = 55/63 (87%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENLSDH+ADPVANNAWAYATNFV
Sbjct: 175 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFV 234

Query: 169 PGK 161
           PGK
Sbjct: 235 PGK 237


>emb|CAA52750.1| chlorophyll a/b binding protein [Amaranthus hypochondriacus]
          Length = 264

 Score =  109 bits (273), Expect = 3e-22
 Identities = 53/63 (84%), Positives = 55/63 (87%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV
Sbjct: 202 PDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 261

Query: 169 PGK 161
           PGK
Sbjct: 262 PGK 264


>emb|CAA84525.1| chlorophyll a,b binding protein type I [Solanum tuberosum]
          Length = 265

 Score =  109 bits (273), Expect = 3e-22
 Identities = 52/63 (82%), Positives = 55/63 (87%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENLSDH+ADPVANNAWAYATNFV
Sbjct: 203 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFV 262

Query: 169 PGK 161
           PGK
Sbjct: 263 PGK 265


>sp|P15192.1|CB22_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 2;
           AltName: Full=Chlorophyll a-b binding protein type II 2;
           Short=CAB; AltName: Full=LHCP gi|169376|gb|AAA33776.1|
           chlorophyll a/b-binding protein [Pinus sylvestris]
          Length = 150

 Score =  108 bits (270), Expect = 7e-22
 Identities = 52/63 (82%), Positives = 54/63 (85%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADPVANNAWAYATNFV
Sbjct: 88  PEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFV 147

Query: 169 PGK 161
           PGK
Sbjct: 148 PGK 150


>gb|ERM99607.1| hypothetical protein AMTR_s00088p00153020 [Amborella trichopoda]
          Length = 264

 Score =  108 bits (269), Expect = 9e-22
 Identities = 52/63 (82%), Positives = 54/63 (85%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADPVANNAWAYATNFV
Sbjct: 202 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFV 261

Query: 169 PGK 161
           PGK
Sbjct: 262 PGK 264


>gb|AAB19040.1| type 2 light-harvesting chlorophyll a/b-binding polypeptide,
           partial [Pinus palustris]
          Length = 246

 Score =  108 bits (269), Expect = 9e-22
 Identities = 52/63 (82%), Positives = 54/63 (85%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADPVANNAWAYATNFV
Sbjct: 184 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFV 243

Query: 169 PGK 161
           PGK
Sbjct: 244 PGK 246


>emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta]
          Length = 274

 Score =  108 bits (269), Expect = 9e-22
 Identities = 51/63 (80%), Positives = 55/63 (87%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENL+DHLADPV+NNAWAYATNFV
Sbjct: 212 PDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVSNNAWAYATNFV 271

Query: 169 PGK 161
           PGK
Sbjct: 272 PGK 274


>sp|P27518.2|CB21_GOSHI RecName: Full=Chlorophyll a-b binding protein 151, chloroplastic;
           AltName: Full=LHCII type II CAB-151; Short=LHCP; Flags:
           Precursor gi|452314|emb|CAA38025.1| chlorophyll ab
           binding protein [Gossypium hirsutum]
          Length = 265

 Score =  108 bits (269), Expect = 9e-22
 Identities = 52/63 (82%), Positives = 54/63 (85%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADPVANNAWAYATNFV
Sbjct: 203 PDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFV 262

Query: 169 PGK 161
           PGK
Sbjct: 263 PGK 265


>emb|CAA74179.1| chlorophyll a/b-binding protein [Beta vulgaris subsp. vulgaris]
          Length = 264

 Score =  108 bits (269), Expect = 9e-22
 Identities = 52/63 (82%), Positives = 55/63 (87%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWA+ATNFV
Sbjct: 202 PEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAFATNFV 261

Query: 169 PGK 161
           PGK
Sbjct: 262 PGK 264


>sp|P10049.1|CB21_PINTH RecName: Full=Chlorophyll a-b binding protein type I,
           chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
           gi|20935|emb|CAA31773.1| chlorophylla/b-binding
           preprotein (AA -37 to 229) [Pinus thunbergii]
          Length = 266

 Score =  108 bits (269), Expect = 9e-22
 Identities = 52/63 (82%), Positives = 54/63 (85%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADPVANNAWAYATNFV
Sbjct: 204 PEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFV 263

Query: 169 PGK 161
           PGK
Sbjct: 264 PGK 266


>emb|CBI28419.3| unnamed protein product [Vitis vinifera]
          Length = 172

 Score =  108 bits (269), Expect = 9e-22
 Identities = 51/59 (86%), Positives = 53/59 (89%)
 Frame = -2

Query: 337 VSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFVPGK 161
           V  +   +KNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADPVANNAWAYATNFVPGK
Sbjct: 114 VELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLVDHLADPVANNAWAYATNFVPGK 172


>ref|XP_002271687.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic
           [Vitis vinifera] gi|147794485|emb|CAN71610.1|
           hypothetical protein VITISV_000630 [Vitis vinifera]
          Length = 265

 Score =  108 bits (269), Expect = 9e-22
 Identities = 52/63 (82%), Positives = 54/63 (85%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADPVANNAWAYATNFV
Sbjct: 203 PDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLVDHLADPVANNAWAYATNFV 262

Query: 169 PGK 161
           PGK
Sbjct: 263 PGK 265


>gb|ABF70157.1| chlorophyll A-B binding protein (CAB), putative [Musa acuminata]
          Length = 264

 Score =  108 bits (269), Expect = 9e-22
 Identities = 52/63 (82%), Positives = 54/63 (85%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADPVANNAWAYATNFV
Sbjct: 202 PDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFV 261

Query: 169 PGK 161
           PGK
Sbjct: 262 PGK 264


>gb|AAV74408.1| chloroplast chlorophyll A/B binding protein [Manihot esculenta]
          Length = 243

 Score =  108 bits (269), Expect = 9e-22
 Identities = 52/63 (82%), Positives = 54/63 (85%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADPVANNAWAYATNFV
Sbjct: 181 PDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFV 240

Query: 169 PGK 161
           PGK
Sbjct: 241 PGK 243


>emb|CAA43907.1| chlorophyll a/b-binding protein [Pinus thunbergii]
          Length = 266

 Score =  108 bits (269), Expect = 9e-22
 Identities = 52/63 (82%), Positives = 54/63 (85%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADPVANNAWAYATNFV
Sbjct: 204 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFV 263

Query: 169 PGK 161
           PGK
Sbjct: 264 PGK 266


>prf||1615137A chlorophyll a/b binding protein P25
          Length = 226

 Score =  108 bits (269), Expect = 9e-22
 Identities = 52/63 (82%), Positives = 54/63 (85%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADPVANNAWAYATNFV
Sbjct: 164 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFV 223

Query: 169 PGK 161
           PGK
Sbjct: 224 PGK 226


>emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta]
          Length = 274

 Score =  108 bits (269), Expect = 9e-22
 Identities = 51/63 (80%), Positives = 55/63 (87%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENL+DHLADPV+NNAWAYATNFV
Sbjct: 212 PDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVSNNAWAYATNFV 271

Query: 169 PGK 161
           PGK
Sbjct: 272 PGK 274


>ref|XP_006363015.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
           [Solanum tuberosum]
          Length = 265

 Score =  107 bits (267), Expect = 2e-21
 Identities = 51/63 (80%), Positives = 54/63 (85%)
 Frame = -2

Query: 349 P*AGVSTQSTRVKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFV 170
           P A    +   +KNGRLAMFSMFGFFVQAIVTGKGPIENLSDH+ DPVANNAWAYATNFV
Sbjct: 203 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNFV 262

Query: 169 PGK 161
           PGK
Sbjct: 263 PGK 265


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