BLASTX nr result
ID: Jatropha_contig00011093
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00011093
(647 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001759481.1| predicted protein [Physcomitrella patens] gi... 92 3e-30
ref|XP_001769561.1| predicted protein [Physcomitrella patens] gi... 92 6e-30
ref|XP_001786159.1| predicted protein [Physcomitrella patens] gi... 87 8e-29
ref|XP_003058037.1| predicted protein [Micromonas pusilla CCMP15... 77 3e-24
ref|XP_002501465.1| predicted protein [Micromonas sp. RCC299] gi... 79 1e-23
gb|EMJ02625.1| hypothetical protein PRUPE_ppa013592mg [Prunus pe... 101 2e-22
gb|ADE77290.1| unknown [Picea sitchensis] 101 2e-22
gb|ERN19095.1| hypothetical protein AMTR_s00061p00127560 [Ambore... 100 4e-22
ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein S... 100 4e-22
ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putat... 100 5e-22
ref|XP_004150106.1| PREDICTED: small nuclear ribonucleoprotein S... 100 6e-22
gb|ESR57345.1| hypothetical protein CICLE_v10022934mg [Citrus cl... 100 8e-22
ref|XP_004242330.1| PREDICTED: small nuclear ribonucleoprotein S... 99 8e-22
gb|EOX94808.1| Small nuclear ribonucleoprotein family protein, p... 99 1e-21
ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein S... 99 1e-21
ref|XP_002306766.1| predicted protein [Populus trichocarpa] gi|2... 99 1e-21
emb|CBI39815.3| unnamed protein product [Vitis vinifera] 99 1e-21
ref|XP_004290666.1| PREDICTED: small nuclear ribonucleoprotein S... 99 1e-21
gb|AGV54824.1| small nuclear ribonucleoprotein Sm D1 [Phaseolus ... 98 3e-21
ref|XP_003518667.1| PREDICTED: small nuclear ribonucleoprotein S... 98 3e-21
>ref|XP_001759481.1| predicted protein [Physcomitrella patens]
gi|162689411|gb|EDQ75783.1| predicted protein
[Physcomitrella patens]
Length = 114
Score = 92.0 bits (227), Expect(3) = 3e-30
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GK+PV LDHLSVRGNNIRYYILPDSLNL+TLLV++TPRVK KKP AG+PV
Sbjct: 49 GKVPVALDHLSVRGNNIRYYILPDSLNLDTLLVDDTPRVKVKKPVAGKPV 98
Score = 56.2 bits (134), Expect(3) = 3e-30
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNP 420
+ L+ + HGTITGVDISMNTHLK+VKLTLKGK P
Sbjct: 17 IELKNGTIVHGTITGVDISMNTHLKSVKLTLKGKVP 52
Score = 30.4 bits (67), Expect(3) = 3e-30
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGT+V
Sbjct: 11 NNETVSIELKNGTIV 25
>ref|XP_001769561.1| predicted protein [Physcomitrella patens]
gi|162679103|gb|EDQ65554.1| predicted protein
[Physcomitrella patens]
Length = 114
Score = 92.0 bits (227), Expect(3) = 6e-30
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GK+PV LDHLS+RGNNIRYYILPDSLNL+TLLV++TPRVK KKP AG+PV
Sbjct: 49 GKVPVALDHLSIRGNNIRYYILPDSLNLDTLLVDDTPRVKSKKPVAGKPV 98
Score = 55.5 bits (132), Expect(3) = 6e-30
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNP 420
+ L+ + HGTITGVDISMNTH+K+VKLTLKGK P
Sbjct: 17 IELKNGTIVHGTITGVDISMNTHMKSVKLTLKGKVP 52
Score = 30.4 bits (67), Expect(3) = 6e-30
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGT+V
Sbjct: 11 NNETVSIELKNGTIV 25
>ref|XP_001786159.1| predicted protein [Physcomitrella patens]
gi|162662031|gb|EDQ49029.1| predicted protein
[Physcomitrella patens]
Length = 111
Score = 87.4 bits (215), Expect(3) = 8e-29
Identities = 39/47 (82%), Positives = 45/47 (95%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG 290
GK+PV+LDHLS+RGNNIRYYILPDSLNL+TLLV++TPRVK KKP AG
Sbjct: 45 GKVPVSLDHLSIRGNNIRYYILPDSLNLDTLLVDDTPRVKAKKPVAG 91
Score = 56.2 bits (134), Expect(3) = 8e-29
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNP 420
+ L+ + HGTITGVDISMNTHLK+VKLTLKGK P
Sbjct: 13 IELKNGTIVHGTITGVDISMNTHLKSVKLTLKGKVP 48
Score = 30.4 bits (67), Expect(3) = 8e-29
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGT+V
Sbjct: 7 NNETVSIELKNGTIV 21
>ref|XP_003058037.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460694|gb|EEH57988.1| predicted protein
[Micromonas pusilla CCMP1545]
Length = 116
Score = 77.0 bits (188), Expect(3) = 3e-24
Identities = 37/50 (74%), Positives = 44/50 (88%), Gaps = 3/50 (6%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPK---KPTAG 290
GK PV++DHLSVRGNNIRYYILPDSLNL+TLLV++TP++K K KP AG
Sbjct: 49 GKNPVSMDHLSVRGNNIRYYILPDSLNLDTLLVDDTPKIKSKPGAKPGAG 98
Score = 55.8 bits (133), Expect(3) = 3e-24
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNP 420
+ L+ + HGTI GVDISMNTHLK VK+TLKGKNP
Sbjct: 17 IELKNGTVVHGTIMGVDISMNTHLKNVKMTLKGKNP 52
Score = 25.4 bits (54), Expect(3) = 3e-24
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3
Query: 543 NETVSIELKNGTVV 502
+ET +IELKNGTVV
Sbjct: 12 HETCTIELKNGTVV 25
>ref|XP_002501465.1| predicted protein [Micromonas sp. RCC299]
gi|226516729|gb|ACO62723.1| predicted protein
[Micromonas sp. RCC299]
Length = 117
Score = 79.3 bits (194), Expect(3) = 1e-23
Identities = 37/49 (75%), Positives = 45/49 (91%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRP 284
GK PV++DHLSVRGNNIRYYILPDSLNL+TLLV++TP++K KP AG+P
Sbjct: 49 GKNPVSMDHLSVRGNNIRYYILPDSLNLDTLLVDDTPKIK-AKPGAGKP 96
Score = 52.0 bits (123), Expect(3) = 1e-23
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNP 420
+ L+ + GTI GVD+SMNTHLK VK+TLKGKNP
Sbjct: 17 IELKNGTVIAGTIMGVDVSMNTHLKNVKMTLKGKNP 52
Score = 25.4 bits (54), Expect(3) = 1e-23
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -3
Query: 543 NETVSIELKNGTVV 502
+E+V+IELKNGTV+
Sbjct: 12 HESVTIELKNGTVI 25
>gb|EMJ02625.1| hypothetical protein PRUPE_ppa013592mg [Prunus persica]
Length = 114
Score = 101 bits (252), Expect(2) = 2e-22
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GK PVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV
Sbjct: 49 GKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 98
Score = 30.8 bits (68), Expect(2) = 2e-22
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGTVV
Sbjct: 11 NNETVSIELKNGTVV 25
Score = 58.9 bits (141), Expect = 1e-06
Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNPSNFGSSKCEG--*QYSLLYPSRQL 354
+ L+ + +GTITGVDISMNTHLKTVKLTLKGKNP G +Y +L S L
Sbjct: 17 IELKNGTVVNGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNL 76
Query: 353 ES 348
E+
Sbjct: 77 ET 78
>gb|ADE77290.1| unknown [Picea sitchensis]
Length = 114
Score = 101 bits (251), Expect(2) = 2e-22
Identities = 46/50 (92%), Positives = 50/50 (100%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVE+TPR+KPKKPTAG+P+
Sbjct: 49 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEDTPRIKPKKPTAGKPI 98
Score = 30.8 bits (68), Expect(2) = 2e-22
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGTVV
Sbjct: 11 NNETVSIELKNGTVV 25
Score = 58.2 bits (139), Expect = 2e-06
Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNPSNFGSSKCEG--*QYSLLYPSRQL 354
+ L+ + HGTITGVDISMNTHLKTVKLTLKGK P G +Y +L S L
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKIPVTLDHLSVRGNNIRYYILPDSLNL 76
Query: 353 ES 348
E+
Sbjct: 77 ET 78
>gb|ERN19095.1| hypothetical protein AMTR_s00061p00127560 [Amborella trichopoda]
Length = 114
Score = 100 bits (249), Expect(2) = 4e-22
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GK PVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRP+
Sbjct: 49 GKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPL 98
Score = 30.8 bits (68), Expect(2) = 4e-22
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGTVV
Sbjct: 11 NNETVSIELKNGTVV 25
Score = 61.6 bits (148), Expect = 2e-07
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNPSNFGSSKCEG--*QYSLLYPSRQL 354
+ L+ + HGTITGVDISMNTHLKTVKLTLKGKNP G +Y +L S L
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNL 76
Query: 353 ES 348
E+
Sbjct: 77 ET 78
>ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
[Vitis vinifera] gi|225436988|ref|XP_002277231.1|
PREDICTED: small nuclear ribonucleoprotein Sm D1-like
isoform 2 [Vitis vinifera]
Length = 114
Score = 100 bits (249), Expect(2) = 4e-22
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GK PVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRP+
Sbjct: 49 GKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPM 98
Score = 30.8 bits (68), Expect(2) = 4e-22
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGTVV
Sbjct: 11 NNETVSIELKNGTVV 25
Score = 61.6 bits (148), Expect = 2e-07
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNPSNFGSSKCEG--*QYSLLYPSRQL 354
+ L+ + HGTITGVDISMNTHLKTVKLTLKGKNP G +Y +L S L
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNL 76
Query: 353 ES 348
E+
Sbjct: 77 ET 78
>ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putative [Ricinus communis]
gi|223540149|gb|EEF41726.1| small nuclear
ribonucleoprotein sm d1, putative [Ricinus communis]
Length = 114
Score = 100 bits (249), Expect(2) = 5e-22
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GK PVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRP+
Sbjct: 49 GKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPL 98
Score = 30.4 bits (67), Expect(2) = 5e-22
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGT+V
Sbjct: 11 NNETVSIELKNGTIV 25
Score = 62.0 bits (149), Expect = 1e-07
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNPSNFGSSKCEG--*QYSLLYPSRQL 354
+ L+ + HGTITGVDISMNTHLKTVKLTLKGKNP G +Y +L S L
Sbjct: 17 IELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNL 76
Query: 353 ES 348
E+
Sbjct: 77 ET 78
>ref|XP_004150106.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Cucumis
sativus] gi|449476727|ref|XP_004154817.1| PREDICTED:
small nuclear ribonucleoprotein Sm D1-like [Cucumis
sativus]
Length = 114
Score = 99.8 bits (247), Expect(2) = 6e-22
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GK PVT+DHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRP+
Sbjct: 49 GKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPL 98
Score = 30.8 bits (68), Expect(2) = 6e-22
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGTVV
Sbjct: 11 NNETVSIELKNGTVV 25
Score = 59.7 bits (143), Expect = 7e-07
Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNPSNFGSSKCEG--*QYSLLYPSRQL 354
+ L+ + HGTITGVDISMNTHLK VKLTLKGKNP G +Y +L S L
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNL 76
Query: 353 ES 348
E+
Sbjct: 77 ET 78
>gb|ESR57345.1| hypothetical protein CICLE_v10022934mg [Citrus clementina]
Length = 114
Score = 99.8 bits (247), Expect(2) = 8e-22
Identities = 48/50 (96%), Positives = 48/50 (96%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GK PV LDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV
Sbjct: 49 GKNPVNLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 98
Score = 30.4 bits (67), Expect(2) = 8e-22
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGT+V
Sbjct: 11 NNETVSIELKNGTIV 25
Score = 64.3 bits (155), Expect = 3e-08
Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNPSNFGSSKCEG--*QYSLLYPSRQL 354
+ L+ + HGTITGVDISMNTHLKTVKLTLKGKNP N G +Y +L S L
Sbjct: 17 IELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVNLDHLSVRGNNIRYYILPDSLNL 76
Query: 353 ES 348
E+
Sbjct: 77 ET 78
>ref|XP_004242330.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Solanum
lycopersicum] gi|460403318|ref|XP_004247138.1|
PREDICTED: small nuclear ribonucleoprotein Sm D1-like
[Solanum lycopersicum] gi|565372361|ref|XP_006352764.1|
PREDICTED: small nuclear ribonucleoprotein Sm D1-like
[Solanum tuberosum]
Length = 114
Score = 99.4 bits (246), Expect(2) = 8e-22
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GK PVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG+P+
Sbjct: 49 GKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPM 98
Score = 30.8 bits (68), Expect(2) = 8e-22
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGTVV
Sbjct: 11 NNETVSIELKNGTVV 25
Score = 58.5 bits (140), Expect = 2e-06
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNPSNFGSSKCEG--*QYSLLYPSRQL 354
+ L+ + HGTITGVD+SMNTHLK VK+TLKGKNP G +Y +L S L
Sbjct: 17 IELKNGTVVHGTITGVDVSMNTHLKAVKITLKGKNPVTLDHLSVRGNNIRYYILPDSLNL 76
Query: 353 ES 348
E+
Sbjct: 77 ET 78
>gb|EOX94808.1| Small nuclear ribonucleoprotein family protein, partial [Theobroma
cacao]
Length = 174
Score = 99.0 bits (245), Expect(2) = 1e-21
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GK PV+LDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRP+
Sbjct: 109 GKNPVSLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPL 158
Score = 30.8 bits (68), Expect(2) = 1e-21
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGTVV
Sbjct: 71 NNETVSIELKNGTVV 85
Score = 62.0 bits (149), Expect = 1e-07
Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNPSNFGSSKCEG--*QYSLLYPSRQL 354
+ L+ + HGTITGVDISMNTHLKTVKLTLKGKNP + G +Y +L S L
Sbjct: 77 IELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVSLDHLSVRGNNIRYYILPDSLNL 136
Query: 353 ES 348
E+
Sbjct: 137 ET 138
>ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Vitis
vinifera]
Length = 114
Score = 99.0 bits (245), Expect(2) = 1e-21
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GK PVT+DHLSVRGNNIRYYILPDS+NLETLLVEETPRVKPKKPTAGRP+
Sbjct: 49 GKNPVTMDHLSVRGNNIRYYILPDSINLETLLVEETPRVKPKKPTAGRPM 98
Score = 30.8 bits (68), Expect(2) = 1e-21
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGTVV
Sbjct: 11 NNETVSIELKNGTVV 25
Score = 61.2 bits (147), Expect = 2e-07
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNPSNFGSSKCEG--*QYSLLYPSRQL 354
+ L+ + HGTITGVDISMNTHLKTVKLTLKGKNP G +Y +L S L
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSINL 76
Query: 353 ES 348
E+
Sbjct: 77 ET 78
>ref|XP_002306766.1| predicted protein [Populus trichocarpa] gi|222856215|gb|EEE93762.1|
small nuclear ribonucleoprotein D1 [Populus trichocarpa]
Length = 112
Score = 99.0 bits (245), Expect(2) = 1e-21
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GK PVTLDHLSVRGNNIRYYILPDSLNLETLL+EETP+VKPKKPTAGRP+
Sbjct: 49 GKNPVTLDHLSVRGNNIRYYILPDSLNLETLLIEETPKVKPKKPTAGRPL 98
Score = 30.8 bits (68), Expect(2) = 1e-21
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGTVV
Sbjct: 11 NNETVSIELKNGTVV 25
Score = 60.5 bits (145), Expect = 4e-07
Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNPSNFGSSKCEG--*QYSLLYPSRQL 354
+ L+ + HGTITGVDISMNTHLKTVKLT+KGKNP G +Y +L S L
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKTVKLTVKGKNPVTLDHLSVRGNNIRYYILPDSLNL 76
Query: 353 ES 348
E+
Sbjct: 77 ET 78
>emb|CBI39815.3| unnamed protein product [Vitis vinifera]
Length = 107
Score = 99.0 bits (245), Expect(2) = 1e-21
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GK PVT+DHLSVRGNNIRYYILPDS+NLETLLVEETPRVKPKKPTAGRP+
Sbjct: 42 GKNPVTMDHLSVRGNNIRYYILPDSINLETLLVEETPRVKPKKPTAGRPM 91
Score = 30.8 bits (68), Expect(2) = 1e-21
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGTVV
Sbjct: 4 NNETVSIELKNGTVV 18
Score = 61.2 bits (147), Expect = 2e-07
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNPSNFGSSKCEG--*QYSLLYPSRQL 354
+ L+ + HGTITGVDISMNTHLKTVKLTLKGKNP G +Y +L S L
Sbjct: 10 IELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSINL 69
Query: 353 ES 348
E+
Sbjct: 70 ET 71
>ref|XP_004290666.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Fragaria
vesca subsp. vesca]
Length = 115
Score = 98.6 bits (244), Expect(2) = 1e-21
Identities = 48/50 (96%), Positives = 48/50 (96%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GK PVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR V
Sbjct: 49 GKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRAV 98
Score = 30.8 bits (68), Expect(2) = 1e-21
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGTVV
Sbjct: 11 NNETVSIELKNGTVV 25
Score = 57.8 bits (138), Expect = 3e-06
Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNPSNFGSSKCEG--*QYSLLYPSRQL 354
+ L+ + +GTITGVDISMNTHLKTVKLTL+GKNP G +Y +L S L
Sbjct: 17 IELKNGTVVNGTITGVDISMNTHLKTVKLTLRGKNPVTLDHLSVRGNNIRYYILPDSLNL 76
Query: 353 ES 348
E+
Sbjct: 77 ET 78
>gb|AGV54824.1| small nuclear ribonucleoprotein Sm D1 [Phaseolus vulgaris]
gi|561012416|gb|ESW11277.1| hypothetical protein
PHAVU_008G016100g [Phaseolus vulgaris]
Length = 114
Score = 97.8 bits (242), Expect(2) = 3e-21
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GK PVTLDHLSVRGNNIRYYILPDSLNLETLLVEETP++KPKKPTAG+P+
Sbjct: 49 GKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPKIKPKKPTAGKPL 98
Score = 30.4 bits (67), Expect(2) = 3e-21
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGT+V
Sbjct: 11 NNETVSIELKNGTIV 25
Score = 62.0 bits (149), Expect = 1e-07
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = -1
Query: 527 LSLRTEPLFHGTITGVDISMNTHLKTVKLTLKGKNPSNFGSSKCEG--*QYSLLYPSRQL 354
+ L+ + HGTITGVDISMNTHLKTVKLTLKGKNP G +Y +L S L
Sbjct: 17 IELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNL 76
Query: 353 ES 348
E+
Sbjct: 77 ET 78
>ref|XP_003518667.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 2
[Glycine max]
Length = 126
Score = 97.8 bits (242), Expect(2) = 3e-21
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = -2
Query: 430 GKIPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPV 281
GK PVTLDHLSVRGNNIRYYILPDSLNLETLLVEETP++KPKKPTAG+P+
Sbjct: 59 GKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPKIKPKKPTAGKPL 108
Score = 30.4 bits (67), Expect(2) = 3e-21
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -3
Query: 546 DNETVSIELKNGTVV 502
+NETVSIELKNGT+V
Sbjct: 11 NNETVSIELKNGTIV 25