BLASTX nr result
ID: Jatropha_contig00010763
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00010763
(426 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subun... 104 1e-20
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai... 86 5e-15
gb|AAF06098.1| ribulose 1,5-bisphosphate carboxylase small chain... 85 8e-15
gb|AAF06100.1| ribulose 1,5-bisphosphate carboxylase small chain... 85 8e-15
gb|AEA48975.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 85 1e-14
gb|ESR54210.1| hypothetical protein CICLE_v10023403mg [Citrus cl... 84 2e-14
gb|AAF06097.1| ribulose 1,5-bisphosphate carboxylase small chain... 83 4e-14
sp|Q42915.1|RBS_MANES RecName: Full=Ribulose bisphosphate carbox... 83 4e-14
gb|AFK48034.1| unknown [Lotus japonicus] 83 4e-14
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 83 4e-14
ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase... 82 5e-14
sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carbox... 82 7e-14
gb|ACA42439.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 82 7e-14
gb|AAG24884.1|AF303941_1 ribulose-1,5-bisphosphate carboxylase s... 82 9e-14
ref|NP_001241137.1| ribulose bisphosphate carboxylase small chai... 82 9e-14
ref|NP_001235266.1| ribulose-1,5-bisphosphate carboxylase small ... 82 9e-14
gb|AFK42721.1| unknown [Lotus japonicus] 82 9e-14
pdb|3AXK|S Chain S, Structure Of Rice Rubisco In Complex With Na... 82 9e-14
ref|NP_001235314.1| uncharacterized protein LOC100500504 [Glycin... 82 9e-14
gb|ACU13285.1| unknown [Glycine max] 82 9e-14
>gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subunit [Jatropha
curcas]
Length = 181
Score = 104 bits (259), Expect = 1e-20
Identities = 49/49 (100%), Positives = 49/49 (100%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKGL 148
FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKGL
Sbjct: 133 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKGL 181
>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 185
Score = 85.9 bits (211), Expect = 5e-15
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKP 139
FGC+DAVQVL ELDEAIKA+PN FVRIIGFD+ RQVQCISFIAYKP
Sbjct: 134 FGCSDAVQVLKELDEAIKAYPNSFVRIIGFDNVRQVQCISFIAYKP 179
>gb|AAF06098.1| ribulose 1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta] gi|6272551|gb|AAF06101.1| ribulose
1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta]
Length = 184
Score = 85.1 bits (209), Expect = 8e-15
Identities = 39/48 (81%), Positives = 42/48 (87%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGCTD+ QVL ELDE IKAHP+GF RIIGFD+ RQVQCISFIAYKP G
Sbjct: 134 FGCTDSSQVLKELDELIKAHPDGFARIIGFDNVRQVQCISFIAYKPPG 181
>gb|AAF06100.1| ribulose 1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta]
Length = 184
Score = 85.1 bits (209), Expect = 8e-15
Identities = 39/48 (81%), Positives = 42/48 (87%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGCTD+ QVL ELDE IKAHP+GF RIIGFD+ RQVQCISFIAYKP G
Sbjct: 134 FGCTDSSQVLKELDELIKAHPDGFARIIGFDNVRQVQCISFIAYKPPG 181
>gb|AEA48975.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit [Rosa
roxburghii]
Length = 179
Score = 84.7 bits (208), Expect = 1e-14
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGCTD+ QVL EL+EA KAHP+GF+RIIGFD+ RQVQCISFIAYKP G
Sbjct: 131 FGCTDSAQVLKELEEAKKAHPDGFIRIIGFDNVRQVQCISFIAYKPPG 178
>gb|ESR54210.1| hypothetical protein CICLE_v10023403mg [Citrus clementina]
Length = 98
Score = 83.6 bits (205), Expect = 2e-14
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGCT+A+QVLNELDEAIKA N F+RIIGFD+ RQVQCISFIAYKP G
Sbjct: 50 FGCTNAIQVLNELDEAIKACHNSFIRIIGFDNVRQVQCISFIAYKPTG 97
>gb|AAF06097.1| ribulose 1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta]
Length = 176
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGCTDA QVL ELDE IK HP+G+ RIIGFD+ RQVQCISF+AYKP G
Sbjct: 128 FGCTDAAQVLKELDELIKHHPDGYARIIGFDNVRQVQCISFLAYKPPG 175
>sp|Q42915.1|RBS_MANES RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|168363|gb|AAA99429.1| ribulose
1,5-bisphosphate carboxylase [Manihot esculenta]
gi|6272549|gb|AAF06099.1| ribulose 1,5-bisphosphate
carboxylase small chain precursor [Manihot esculenta]
Length = 182
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGCTDA QVL ELDE IK HP+G+ RIIGFD+ RQVQCISF+AYKP G
Sbjct: 134 FGCTDAAQVLKELDELIKHHPDGYARIIGFDNVRQVQCISFLAYKPPG 181
>gb|AFK48034.1| unknown [Lotus japonicus]
Length = 181
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGC+DA QVL ELDEA+KA+PN FVRIIGFD+ RQVQCISFIA++P G
Sbjct: 133 FGCSDATQVLKELDEAVKAYPNAFVRIIGFDNVRQVQCISFIAHRPAG 180
>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 82.8 bits (203), Expect = 4e-14
Identities = 38/48 (79%), Positives = 41/48 (85%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGCTD +QV ELDEAIK +PN FVRIIGFD+ RQVQCISFIAYKP G
Sbjct: 133 FGCTDPLQVFKELDEAIKTYPNAFVRIIGFDNKRQVQCISFIAYKPPG 180
>ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 182
Score = 82.4 bits (202), Expect = 5e-14
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGCTDA QVL EL+EA KA+PN F+RIIGFD+ RQVQCISFIAYKP G
Sbjct: 134 FGCTDASQVLKELEEAKKAYPNAFIRIIGFDNVRQVQCISFIAYKPAG 181
>sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|168217|gb|AAA33361.1|
ribulose-1,5-bisphosphate carboxylase small subunit
[Hevea brasiliensis]
Length = 183
Score = 82.0 bits (201), Expect = 7e-14
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGCTDAVQVL ELDE IKA+P+ + RIIGFD+ RQVQCISF+AYKPKG
Sbjct: 134 FGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPKG 181
>gb|ACA42439.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Hevea brasiliensis]
Length = 183
Score = 82.0 bits (201), Expect = 7e-14
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGCTDAVQVL ELDE IKA+P+ + RIIGFD+ RQVQCISF+AYKPKG
Sbjct: 134 FGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPKG 181
>gb|AAG24884.1|AF303941_1 ribulose-1,5-bisphosphate carboxylase small subunit rbcS3 [Glycine
max]
Length = 178
Score = 81.6 bits (200), Expect = 9e-14
Identities = 38/48 (79%), Positives = 41/48 (85%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGCTDA QVL EL EA A+PNGF+RIIGFD+ RQVQCISFIAYKP G
Sbjct: 130 FGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPG 177
>ref|NP_001241137.1| ribulose bisphosphate carboxylase small chain 1, chloroplastic-like
[Glycine max] gi|10946375|gb|AAG24882.1|AF303939_1
ribulose-1,5-bisphosphate carboxylase small subunit
rbcS1 [Glycine max] gi|1055368|gb|AAA81328.1|
ribulose-1,5-bisphosphate carboxylase small subunit
[Glycine max]
Length = 178
Score = 81.6 bits (200), Expect = 9e-14
Identities = 38/48 (79%), Positives = 41/48 (85%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGCTDA QVL EL EA A+PNGF+RIIGFD+ RQVQCISFIAYKP G
Sbjct: 130 FGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPG 177
>ref|NP_001235266.1| ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 [Glycine
max] gi|10946377|gb|AAG24883.1|AF303940_1
ribulose-1,5-bisphosphate carboxylase small subunit
rbcS2 [Glycine max]
Length = 178
Score = 81.6 bits (200), Expect = 9e-14
Identities = 38/48 (79%), Positives = 41/48 (85%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGCTDA QVL EL EA A+PNGF+RIIGFD+ RQVQCISFIAYKP G
Sbjct: 130 FGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPG 177
>gb|AFK42721.1| unknown [Lotus japonicus]
Length = 182
Score = 81.6 bits (200), Expect = 9e-14
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGC+DA QVL ELDEA++A+PN FVRIIGFD+ RQVQCISFIA++P G
Sbjct: 134 FGCSDAAQVLKELDEAVRAYPNAFVRIIGFDNVRQVQCISFIAHRPAG 181
>pdb|3AXK|S Chain S, Structure Of Rice Rubisco In Complex With Nadp(h)
gi|383875289|pdb|3AXK|T Chain T, Structure Of Rice
Rubisco In Complex With Nadp(h)
Length = 129
Score = 81.6 bits (200), Expect = 9e-14
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGCTDA QVL EL+EA KA+P+ FVRIIGFD+ RQVQCISFIAYKP G
Sbjct: 75 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQCISFIAYKPPG 122
>ref|NP_001235314.1| uncharacterized protein LOC100500504 [Glycine max]
gi|255630492|gb|ACU15604.1| unknown [Glycine max]
Length = 178
Score = 81.6 bits (200), Expect = 9e-14
Identities = 38/48 (79%), Positives = 41/48 (85%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGCTDA QVL EL EA A+PNGF+RIIGFD+ RQVQCISFIAYKP G
Sbjct: 130 FGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPG 177
>gb|ACU13285.1| unknown [Glycine max]
Length = 178
Score = 81.6 bits (200), Expect = 9e-14
Identities = 38/48 (79%), Positives = 41/48 (85%)
Frame = +2
Query: 2 FGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 145
FGCTDA QVL EL EA A+PNGF+RIIGFD+ RQVQCISFIAYKP G
Sbjct: 130 FGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPG 177