BLASTX nr result
ID: Jatropha_contig00010629
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00010629
(749 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subun... 273 1e-88
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai... 234 5e-73
gb|AFK48034.1| unknown [Lotus japonicus] 234 2e-72
sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carbox... 237 3e-72
sp|Q42915.1|RBS_MANES RecName: Full=Ribulose bisphosphate carbox... 235 3e-72
gb|AFK42721.1| unknown [Lotus japonicus] 234 4e-72
gb|AAF06098.1| ribulose 1,5-bisphosphate carboxylase small chain... 229 8e-72
gb|EMJ16250.1| hypothetical protein PRUPE_ppa012123mg [Prunus pe... 233 1e-71
ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai... 232 3e-71
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox... 239 4e-71
gb|AAF06100.1| ribulose 1,5-bisphosphate carboxylase small chain... 226 6e-71
gb|AGV54682.1| ribulose bisphosphate carboxylase [Phaseolus vulg... 229 2e-70
gb|ESW23644.1| hypothetical protein PHAVU_004G064800g [Phaseolus... 229 3e-70
gb|ACA42439.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 230 4e-70
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun... 229 4e-70
emb|CAA42618.1| ribulose bisphosphate carboxylase [Phaseolus vul... 228 7e-70
gb|AAG24884.1|AF303941_1 ribulose-1,5-bisphosphate carboxylase s... 226 1e-69
ref|NP_001241137.1| ribulose bisphosphate carboxylase small chai... 226 1e-69
ref|NP_001235314.1| uncharacterized protein LOC100500504 [Glycin... 226 2e-69
sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carbox... 226 6e-69
>gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subunit [Jatropha
curcas]
Length = 181
Score = 273 bits (697), Expect(2) = 1e-88
Identities = 129/132 (97%), Positives = 129/132 (97%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMKVWPTQGLKKFETL 181
INRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIA NGGRVQCMKVWPTQGLKKFETL
Sbjct: 14 INRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIAGNGGRVQCMKVWPTQGLKKFETL 73
Query: 182 SYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMF 361
SYLPPLT EQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMF
Sbjct: 74 SYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMF 133
Query: 362 GCTDAVQVLNGL 397
GCTDAVQVLN L
Sbjct: 134 GCTDAVQVLNEL 145
Score = 81.3 bits (199), Expect(2) = 1e-88
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 385 LERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKGL 504
L LDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKGL
Sbjct: 142 LNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKGL 181
>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 185
Score = 234 bits (598), Expect(2) = 5e-73
Identities = 111/133 (83%), Positives = 119/133 (89%), Gaps = 1/133 (0%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCMKVWPTQGLKKFET 178
+NRASPAQA+MVAPFTGLKST+ FP RKT DIT++A+NGGRVQCM+VWP G KKFET
Sbjct: 14 LNRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCMQVWPPLGKKKFET 73
Query: 179 LSYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPM 358
LSYLP LT EQLAKEVEYLLR GWVPCLEFELEHGFVYREN RSPGYYDGRYWTMWKLPM
Sbjct: 74 LSYLPDLTREQLAKEVEYLLRKGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPM 133
Query: 359 FGCTDAVQVLNGL 397
FGC+DAVQVL L
Sbjct: 134 FGCSDAVQVLKEL 146
Score = 67.0 bits (162), Expect(2) = 5e-73
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1
Query: 385 LERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKP 495
L+ LDEAIKA+PN FVRIIGFD+ RQVQCISFIAYKP
Sbjct: 143 LKELDEAIKAYPNSFVRIIGFDNVRQVQCISFIAYKP 179
>gb|AFK48034.1| unknown [Lotus japonicus]
Length = 181
Score = 234 bits (598), Expect(2) = 2e-72
Identities = 110/132 (83%), Positives = 115/132 (87%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMKVWPTQGLKKFETL 181
IN ASPAQA MVAPFTGLKS AGFP RK NDITSIA+NGGRVQCM+VWP G KKFETL
Sbjct: 14 INSASPAQANMVAPFTGLKSMAGFPVRKVNNDITSIANNGGRVQCMQVWPPIGKKKFETL 73
Query: 182 SYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMF 361
SYLPPLT EQL KEVEYLLR GWVPCLEFE E GFVYREN++SPGYYDGRYWTMWKLPMF
Sbjct: 74 SYLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYYDGRYWTMWKLPMF 133
Query: 362 GCTDAVQVLNGL 397
GC+DA QVL L
Sbjct: 134 GCSDATQVLKEL 145
Score = 65.5 bits (158), Expect(2) = 2e-72
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +1
Query: 385 LERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 501
L+ LDEA+KA+PN FVRIIGFD+ RQVQCISFIA++P G
Sbjct: 142 LKELDEAVKAYPNAFVRIIGFDNVRQVQCISFIAHRPAG 180
>sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|168217|gb|AAA33361.1|
ribulose-1,5-bisphosphate carboxylase small subunit
[Hevea brasiliensis]
Length = 183
Score = 237 bits (605), Expect(2) = 3e-72
Identities = 114/138 (82%), Positives = 122/138 (88%), Gaps = 1/138 (0%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCMKVWPTQGLKKFET 178
INRASPAQA+MVAPFTGLKST+ FP RKTT DITSIASNGGRVQCM+VWP +G K +ET
Sbjct: 14 INRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYET 73
Query: 179 LSYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPM 358
LSYLPPLT EQLAKEVEYLLR GWVPCLEFELEHG VYRE +RSPGYYDGRYWTMWKLPM
Sbjct: 74 LSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPM 133
Query: 359 FGCTDAVQVLNGLMRQLR 412
FGCTDAVQVL L ++
Sbjct: 134 FGCTDAVQVLQELDEMIK 151
Score = 62.0 bits (149), Expect(2) = 3e-72
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +1
Query: 385 LERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 501
L+ LDE IKA+P+ + RIIGFD+ RQVQCISF+AYKPKG
Sbjct: 143 LQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPKG 181
>sp|Q42915.1|RBS_MANES RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|168363|gb|AAA99429.1| ribulose
1,5-bisphosphate carboxylase [Manihot esculenta]
gi|6272549|gb|AAF06099.1| ribulose 1,5-bisphosphate
carboxylase small chain precursor [Manihot esculenta]
Length = 182
Score = 235 bits (600), Expect(2) = 3e-72
Identities = 112/133 (84%), Positives = 117/133 (87%), Gaps = 1/133 (0%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCMKVWPTQGLKKFET 178
INR SPAQATMVAPFTGLKST FP RKT +DITSI SNGG+VQCMKVWPT G+KKFET
Sbjct: 14 INRVSPAQATMVAPFTGLKSTPVFPTTRKTNSDITSITSNGGKVQCMKVWPTLGMKKFET 73
Query: 179 LSYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPM 358
LSYLPPLT EQLA EVEYLLRSGW+PCLEFELEHG VYRE+ R PGYYDGRYWTMWKLPM
Sbjct: 74 LSYLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWTMWKLPM 133
Query: 359 FGCTDAVQVLNGL 397
FGCTDA QVL L
Sbjct: 134 FGCTDAAQVLKEL 146
Score = 63.9 bits (154), Expect(2) = 3e-72
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +1
Query: 385 LERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 501
L+ LDE IK HP+G+ RIIGFD+ RQVQCISF+AYKP G
Sbjct: 143 LKELDELIKHHPDGYARIIGFDNVRQVQCISFLAYKPPG 181
>gb|AFK42721.1| unknown [Lotus japonicus]
Length = 182
Score = 234 bits (597), Expect(2) = 4e-72
Identities = 111/137 (81%), Positives = 117/137 (85%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMKVWPTQGLKKFETL 181
I ASPAQA+MVAPFTGLKS AGFP RK NDITSIASNGGRVQCM+VWP G KKFETL
Sbjct: 15 IKGASPAQASMVAPFTGLKSMAGFPVRKANNDITSIASNGGRVQCMQVWPPIGKKKFETL 74
Query: 182 SYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMF 361
SYLPPLT EQL KEVEYLLR GWVPCLEFE E GFVYREN++SPGYYDGRYWTMWKLPMF
Sbjct: 75 SYLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYYDGRYWTMWKLPMF 134
Query: 362 GCTDAVQVLNGLMRQLR 412
GC+DA QVL L +R
Sbjct: 135 GCSDAAQVLKELDEAVR 151
Score = 64.3 bits (155), Expect(2) = 4e-72
Identities = 28/39 (71%), Positives = 35/39 (89%)
Frame = +1
Query: 385 LERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 501
L+ LDEA++A+PN FVRIIGFD+ RQVQCISFIA++P G
Sbjct: 143 LKELDEAVRAYPNAFVRIIGFDNVRQVQCISFIAHRPAG 181
>gb|AAF06098.1| ribulose 1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta] gi|6272551|gb|AAF06101.1| ribulose
1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta]
Length = 184
Score = 229 bits (584), Expect(2) = 8e-72
Identities = 107/133 (80%), Positives = 119/133 (89%), Gaps = 1/133 (0%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPAR-KTTNDITSIASNGGRVQCMKVWPTQGLKKFET 178
INRASPAQA+MVAPFTGLKST+ FPA KT+ DITS+ASNGGRVQCM+VWPT+G KKFET
Sbjct: 14 INRASPAQASMVAPFTGLKSTSAFPATTKTSADITSLASNGGRVQCMQVWPTRGKKKFET 73
Query: 179 LSYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPM 358
LSYLPPL+ EQLA E++YLLRSGW+PCLEFELEHGFVYR + PGYYDGRYWTMWKLPM
Sbjct: 74 LSYLPPLSREQLASEIDYLLRSGWIPCLEFELEHGFVYRAHGSLPGYYDGRYWTMWKLPM 133
Query: 359 FGCTDAVQVLNGL 397
FGCTD+ QVL L
Sbjct: 134 FGCTDSSQVLKEL 146
Score = 68.6 bits (166), Expect(2) = 8e-72
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +1
Query: 376 SSGLERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 501
S L+ LDE IKAHP+GF RIIGFD+ RQVQCISFIAYKP G
Sbjct: 140 SQVLKELDELIKAHPDGFARIIGFDNVRQVQCISFIAYKPPG 181
>gb|EMJ16250.1| hypothetical protein PRUPE_ppa012123mg [Prunus persica]
Length = 183
Score = 233 bits (593), Expect(2) = 1e-71
Identities = 108/131 (82%), Positives = 117/131 (89%)
Frame = +2
Query: 5 NRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMKVWPTQGLKKFETLS 184
+RA+PAQA++VAPFTGLKS + FP K TNDITSIASNGGRVQCMKVWPT GLKKFETLS
Sbjct: 17 DRAAPAQASLVAPFTGLKSASAFPGAKKTNDITSIASNGGRVQCMKVWPTVGLKKFETLS 76
Query: 185 YLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFG 364
YLPPL+ E LAKEV+YLLR WVPCLEFELE GFVYREN+RSPGYYDGRYWTMWKLPMFG
Sbjct: 77 YLPPLSPESLAKEVDYLLRKNWVPCLEFELEKGFVYRENHRSPGYYDGRYWTMWKLPMFG 136
Query: 365 CTDAVQVLNGL 397
CTD+ QVL L
Sbjct: 137 CTDSSQVLKEL 147
Score = 64.3 bits (155), Expect(2) = 1e-71
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +1
Query: 376 SSGLERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 501
S L+ L+EA KA+PN F+RIIGFD+ RQVQCISFIAYKP G
Sbjct: 141 SQVLKELEEAKKANPNSFIRIIGFDNVRQVQCISFIAYKPAG 182
>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
precursor, putative [Ricinus communis]
gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
carboxylase small chain 1B, chloroplast precursor,
putative [Ricinus communis]
Length = 181
Score = 232 bits (592), Expect(2) = 3e-71
Identities = 109/133 (81%), Positives = 118/133 (88%), Gaps = 1/133 (0%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCMKVWPTQGLKKFET 178
++R+SPAQATMVAPFTGLKS A FP RK NDITSIASNGGRVQCM+VWP G KKFET
Sbjct: 11 VSRSSPAQATMVAPFTGLKSAASFPVTRKANNDITSIASNGGRVQCMQVWPPLGKKKFET 70
Query: 179 LSYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPM 358
LSYLP LT EQLAKEV+YLLR GW+PCLEFELEHGFVYREN+RSPGYYDGRYWTMWKLPM
Sbjct: 71 LSYLPDLTDEQLAKEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPM 130
Query: 359 FGCTDAVQVLNGL 397
FGC+D+ QVL L
Sbjct: 131 FGCSDSTQVLKEL 143
Score = 63.5 bits (153), Expect(2) = 3e-71
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +1
Query: 385 LERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKP 495
L+ LDEA KA+PN F+RIIGFD+ RQVQCISFIAYKP
Sbjct: 140 LKELDEAKKAYPNSFIRIIGFDNRRQVQCISFIAYKP 176
>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Aralia elata]
Length = 183
Score = 239 bits (610), Expect(2) = 4e-71
Identities = 109/130 (83%), Positives = 120/130 (92%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMKVWPTQGLKKFETL 181
++RA+PAQA+MVAPFTGLKSTA FP + NDITS+ SNGGRVQCMKVWP GLKKFETL
Sbjct: 14 VSRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETL 73
Query: 182 SYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMF 361
SYLPPLT E+LAKEV+YLLRSGWVPCLEFELEHG+VYREN+RSPGYYDGRYWTMWKLPMF
Sbjct: 74 SYLPPLTNEELAKEVDYLLRSGWVPCLEFELEHGWVYRENHRSPGYYDGRYWTMWKLPMF 133
Query: 362 GCTDAVQVLN 391
GCTD+ QVLN
Sbjct: 134 GCTDSSQVLN 143
Score = 56.2 bits (134), Expect(2) = 4e-71
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +1
Query: 376 SSGLERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKP 495
S L ++E K +PN F+RIIGFD+ RQVQCISFIA+KP
Sbjct: 139 SQVLNEVEECKKEYPNAFIRIIGFDNVRQVQCISFIAFKP 178
>gb|AAF06100.1| ribulose 1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta]
Length = 184
Score = 226 bits (576), Expect(2) = 6e-71
Identities = 106/133 (79%), Positives = 118/133 (88%), Gaps = 1/133 (0%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPAR-KTTNDITSIASNGGRVQCMKVWPTQGLKKFET 178
INRASPAQA+MVAPFTGLKST+ F A KT+ DITS+ASNGGRVQCM+VWPT+G KKFET
Sbjct: 14 INRASPAQASMVAPFTGLKSTSAFTATTKTSADITSLASNGGRVQCMQVWPTRGKKKFET 73
Query: 179 LSYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPM 358
LSYLPPL+ EQLA E++YLLRSGW+PCLEFELEHGFVYR + PGYYDGRYWTMWKLPM
Sbjct: 74 LSYLPPLSREQLASEIDYLLRSGWIPCLEFELEHGFVYRAHGSLPGYYDGRYWTMWKLPM 133
Query: 359 FGCTDAVQVLNGL 397
FGCTD+ QVL L
Sbjct: 134 FGCTDSSQVLKEL 146
Score = 68.6 bits (166), Expect(2) = 6e-71
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +1
Query: 376 SSGLERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 501
S L+ LDE IKAHP+GF RIIGFD+ RQVQCISFIAYKP G
Sbjct: 140 SQVLKELDELIKAHPDGFARIIGFDNVRQVQCISFIAYKPPG 181
>gb|AGV54682.1| ribulose bisphosphate carboxylase [Phaseolus vulgaris]
Length = 180
Score = 229 bits (585), Expect(2) = 2e-70
Identities = 107/132 (81%), Positives = 117/132 (88%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMKVWPTQGLKKFETL 181
+NRA A A MVAPFTGLKS GFP+RK NDITS+A+NGGRVQC++VWPT G KKFETL
Sbjct: 14 VNRAG-AGAGMVAPFTGLKSLGGFPSRKMNNDITSVANNGGRVQCIQVWPTVGKKKFETL 72
Query: 182 SYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMF 361
SYLPPLT EQLAKEV+YLLR GWVPCLEFELEHGFVYRE+N+SPGYYDGRYWTMWKLPMF
Sbjct: 73 SYLPPLTQEQLAKEVDYLLRKGWVPCLEFELEHGFVYREHNKSPGYYDGRYWTMWKLPMF 132
Query: 362 GCTDAVQVLNGL 397
GCTD+ QVL L
Sbjct: 133 GCTDSSQVLKEL 144
Score = 63.2 bits (152), Expect(2) = 2e-70
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +1
Query: 376 SSGLERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 501
S L+ L EA AHP+GF+RIIGFD+ RQVQCISFIAYKP G
Sbjct: 138 SQVLKELYEAQTAHPDGFIRIIGFDNVRQVQCISFIAYKPPG 179
>gb|ESW23644.1| hypothetical protein PHAVU_004G064800g [Phaseolus vulgaris]
gi|561024960|gb|ESW23645.1| hypothetical protein
PHAVU_004G064900g [Phaseolus vulgaris]
Length = 180
Score = 229 bits (584), Expect(2) = 3e-70
Identities = 107/132 (81%), Positives = 117/132 (88%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMKVWPTQGLKKFETL 181
+NRA A A MVAPFTGLKS GFP+RK NDITS+A+NGGRVQC++VWPT G KKFETL
Sbjct: 14 VNRAG-AGAGMVAPFTGLKSLGGFPSRKMNNDITSVANNGGRVQCIQVWPTVGKKKFETL 72
Query: 182 SYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMF 361
SYLPPLT EQLAKEV+YLLR GWVPCLEFELEHGFVYRE+N+SPGYYDGRYWTMWKLPMF
Sbjct: 73 SYLPPLTKEQLAKEVDYLLRKGWVPCLEFELEHGFVYREHNKSPGYYDGRYWTMWKLPMF 132
Query: 362 GCTDAVQVLNGL 397
GCTD+ QVL L
Sbjct: 133 GCTDSSQVLKEL 144
Score = 63.2 bits (152), Expect(2) = 3e-70
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +1
Query: 376 SSGLERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 501
S L+ L EA AHP+GF+RIIGFD+ RQVQCISFIAYKP G
Sbjct: 138 SQVLKELYEAQTAHPDGFIRIIGFDNVRQVQCISFIAYKPPG 179
>gb|ACA42439.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Hevea brasiliensis]
Length = 183
Score = 230 bits (586), Expect(2) = 4e-70
Identities = 111/138 (80%), Positives = 118/138 (85%), Gaps = 1/138 (0%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPA-RKTTNDITSIASNGGRVQCMKVWPTQGLKKFET 178
INRASPAQA+MVAPFTGLKST+ FP RKTT DITSIASNGGRVQCM+VWP +G K FET
Sbjct: 14 INRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFFET 73
Query: 179 LSYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPM 358
YLPPLT EQLAKEVEYL GWVPCLEFELEHG VYRE +RSPGYYDGRYWTMWKLPM
Sbjct: 74 FLYLPPLTREQLAKEVEYLFCKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPM 133
Query: 359 FGCTDAVQVLNGLMRQLR 412
FGCTDAVQVL L ++
Sbjct: 134 FGCTDAVQVLQELDEMIK 151
Score = 62.0 bits (149), Expect(2) = 4e-70
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +1
Query: 385 LERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 501
L+ LDE IKA+P+ + RIIGFD+ RQVQCISF+AYKPKG
Sbjct: 143 LQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPKG 181
>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus
domestica x Pyrus communis]
Length = 179
Score = 229 bits (584), Expect(2) = 4e-70
Identities = 105/129 (81%), Positives = 115/129 (89%)
Frame = +2
Query: 11 ASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMKVWPTQGLKKFETLSYL 190
++PAQA MVAPFTGLKS++ FP + +NDITSIASNGGRVQCM+VWP GLKKFETLSYL
Sbjct: 15 SAPAQARMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYL 74
Query: 191 PPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFGCT 370
PPL+ E LAKEV+YLLR WVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFGCT
Sbjct: 75 PPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFGCT 134
Query: 371 DAVQVLNGL 397
D+ QVL L
Sbjct: 135 DSSQVLKEL 143
Score = 62.8 bits (151), Expect(2) = 4e-70
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = +1
Query: 376 SSGLERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKGL 504
S L+ L+EA KA+P F+RIIGFD+ RQVQCISFIAYKP G+
Sbjct: 137 SQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPPGV 179
>emb|CAA42618.1| ribulose bisphosphate carboxylase [Phaseolus vulgaris]
gi|21053|emb|CAA40339.1| small subunit of ribulose
1,5-bisphosphate carboxylase/oxygenase [Phaseolus
vulgaris]
Length = 180
Score = 228 bits (581), Expect(2) = 7e-70
Identities = 106/132 (80%), Positives = 117/132 (88%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMKVWPTQGLKKFETL 181
+NRA A A MVAPFTGLKS GFP+RK NDITS+A+NGGRVQC++VWPT G KKFETL
Sbjct: 14 VNRAG-AGAGMVAPFTGLKSLGGFPSRKMNNDITSVANNGGRVQCIQVWPTVGKKKFETL 72
Query: 182 SYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMF 361
SYLPPLT +QLAKEV+YLLR GWVPCLEFELEHGFVYRE+N+SPGYYDGRYWTMWKLPMF
Sbjct: 73 SYLPPLTKQQLAKEVDYLLRKGWVPCLEFELEHGFVYREHNKSPGYYDGRYWTMWKLPMF 132
Query: 362 GCTDAVQVLNGL 397
GCTD+ QVL L
Sbjct: 133 GCTDSSQVLKEL 144
Score = 63.2 bits (152), Expect(2) = 7e-70
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +1
Query: 376 SSGLERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 501
S L+ L EA AHP+GF+RIIGFD+ RQVQCISFIAYKP G
Sbjct: 138 SQVLKELYEAQTAHPDGFIRIIGFDNVRQVQCISFIAYKPPG 179
>gb|AAG24884.1|AF303941_1 ribulose-1,5-bisphosphate carboxylase small subunit rbcS3 [Glycine
max]
Length = 178
Score = 226 bits (577), Expect(2) = 1e-69
Identities = 109/132 (82%), Positives = 113/132 (85%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMKVWPTQGLKKFETL 181
+NRA A MVAPFTGLKS AGFP RKT NDITSIASNGGRVQCM+VWP G KKFETL
Sbjct: 14 VNRAG---AGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWPPVGKKKFETL 70
Query: 182 SYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMF 361
SYLP L QLAKEVEYLLR GW+PCLEFELEHGFVYRE+NRSPGYYDGRYWTMWKLPMF
Sbjct: 71 SYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMF 130
Query: 362 GCTDAVQVLNGL 397
GCTDA QVL L
Sbjct: 131 GCTDASQVLKEL 142
Score = 63.9 bits (154), Expect(2) = 1e-69
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +1
Query: 376 SSGLERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 501
S L+ L EA A+PNGF+RIIGFD+ RQVQCISFIAYKP G
Sbjct: 136 SQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPG 177
>ref|NP_001241137.1| ribulose bisphosphate carboxylase small chain 1, chloroplastic-like
[Glycine max] gi|10946375|gb|AAG24882.1|AF303939_1
ribulose-1,5-bisphosphate carboxylase small subunit
rbcS1 [Glycine max] gi|1055368|gb|AAA81328.1|
ribulose-1,5-bisphosphate carboxylase small subunit
[Glycine max]
Length = 178
Score = 226 bits (577), Expect(2) = 1e-69
Identities = 109/132 (82%), Positives = 113/132 (85%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMKVWPTQGLKKFETL 181
+NRA A MVAPFTGLKS AGFP RKT NDITSIASNGGRVQCM+VWP G KKFETL
Sbjct: 14 VNRAG---AGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWPPVGKKKFETL 70
Query: 182 SYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMF 361
SYLP L QLAKEVEYLLR GW+PCLEFELEHGFVYRE+NRSPGYYDGRYWTMWKLPMF
Sbjct: 71 SYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMF 130
Query: 362 GCTDAVQVLNGL 397
GCTDA QVL L
Sbjct: 131 GCTDASQVLKEL 142
Score = 63.9 bits (154), Expect(2) = 1e-69
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +1
Query: 376 SSGLERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 501
S L+ L EA A+PNGF+RIIGFD+ RQVQCISFIAYKP G
Sbjct: 136 SQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPG 177
>ref|NP_001235314.1| uncharacterized protein LOC100500504 [Glycine max]
gi|255630492|gb|ACU15604.1| unknown [Glycine max]
Length = 178
Score = 226 bits (576), Expect(2) = 2e-69
Identities = 109/132 (82%), Positives = 113/132 (85%)
Frame = +2
Query: 2 INRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMKVWPTQGLKKFETL 181
+NRA A MVAPFTGLKS AGFP RKT NDITSIASNGGRVQCM+VWP G KKFETL
Sbjct: 14 VNRAG---AGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWPPIGKKKFETL 70
Query: 182 SYLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMF 361
SYLP L QLAKEVEYLLR GW+PCLEFELEHGFVYRE+NRSPGYYDGRYWTMWKLPMF
Sbjct: 71 SYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMF 130
Query: 362 GCTDAVQVLNGL 397
GCTDA QVL L
Sbjct: 131 GCTDASQVLKEL 142
Score = 63.9 bits (154), Expect(2) = 2e-69
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +1
Query: 376 SSGLERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 501
S L+ L EA A+PNGF+RIIGFD+ RQVQCISFIAYKP G
Sbjct: 136 SQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPG 177
>sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|19581|emb|CAA46475.1| ribulose bisphosphate
carboxylase [Malus sp.]
Length = 183
Score = 226 bits (575), Expect(2) = 6e-69
Identities = 104/131 (79%), Positives = 115/131 (87%)
Frame = +2
Query: 5 NRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIASNGGRVQCMKVWPTQGLKKFETLS 184
+R +PAQA MVAPFTGLKS++ P + +NDITSIASNGGRVQCM+VWP GLKKFETLS
Sbjct: 17 DRPAPAQARMVAPFTGLKSSSASPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLS 76
Query: 185 YLPPLTMEQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFG 364
YLPPL+ E LAKEV+YLLR WVPCLEFELEHGFVYREN+RSPGYYDGRYWTMWKLPMFG
Sbjct: 77 YLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFG 136
Query: 365 CTDAVQVLNGL 397
CTD+ QVL L
Sbjct: 137 CTDSSQVLKEL 147
Score = 62.4 bits (150), Expect(2) = 6e-69
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +1
Query: 376 SSGLERLDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 501
S L+ L+EA KA+P F+RIIGFD+ RQVQCISFIAYKP G
Sbjct: 141 SQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182