BLASTX nr result
ID: Jatropha_contig00010078
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00010078
(513 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESR43205.1| hypothetical protein CICLE_v10013157mg [Citrus cl... 86 4e-15
ref|XP_003520726.1| PREDICTED: 40S ribosomal protein S28-like [G... 78 1e-12
emb|CBI29957.3| unnamed protein product [Vitis vinifera] 76 5e-12
ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus com... 76 5e-12
gb|EMJ03959.1| hypothetical protein PRUPE_ppa013411mg [Prunus pe... 75 6e-12
ref|XP_002311925.1| predicted protein [Populus trichocarpa] gi|2... 75 6e-12
gb|EOY09636.1| Nucleic acid-binding, OB-fold-like protein [Theob... 75 1e-11
ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncat... 75 1e-11
ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [C... 73 3e-11
ref|XP_004138229.1| PREDICTED: 40S ribosomal protein S28-like [C... 73 3e-11
gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis] 73 3e-11
emb|CAA10101.1| ribosomal protein S28 [Prunus persica] gi|394772... 73 3e-11
ref|XP_002322747.1| predicted protein [Populus trichocarpa] gi|1... 73 4e-11
gb|AAM78552.1|AF522185_1 ribosomal protein small subunit 28 [Hel... 73 4e-11
ref|NP_001105548.1| 40S ribosomal protein S28 [Zea mays] gi|1173... 67 5e-11
gb|ESW17738.1| hypothetical protein PHAVU_007G264100g [Phaseolus... 72 5e-11
gb|ACG26633.1| 40S ribosomal protein S28 [Zea mays] 66 7e-11
gb|ABY77634.1| At5g03850 [Arabidopsis thaliana] gi|166007603|gb|... 63 7e-11
gb|ESW35015.1| hypothetical protein PHAVU_001G199400g [Phaseolus... 72 9e-11
ref|XP_004489433.1| PREDICTED: 40S ribosomal protein S28-like [C... 72 9e-11
>gb|ESR43205.1| hypothetical protein CICLE_v10013157mg [Citrus clementina]
Length = 114
Score = 86.3 bits (212), Expect = 4e-15
Identities = 49/70 (70%), Positives = 53/70 (75%), Gaps = 9/70 (12%)
Frame = +3
Query: 9 CVCFSFLSSSFRMDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLRD 176
C S L+SS RMDSQIKHAVVVK MGRTGSRGQVTQVRVKFLDDQNRFI +G +R+
Sbjct: 38 CHLLSLLASSLRMDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVRE 97
Query: 177 -----LLEKE 191
LLE E
Sbjct: 98 GDILTLLESE 107
>ref|XP_003520726.1| PREDICTED: 40S ribosomal protein S28-like [Glycine max]
Length = 105
Score = 78.2 bits (191), Expect = 1e-12
Identities = 44/71 (61%), Positives = 52/71 (73%), Gaps = 9/71 (12%)
Frame = +3
Query: 6 ACVCFSFLSSSFRMDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLR 173
AC S +S+ RM+SQ+KHA+VVK MGRTGSRGQVTQVRVKFLDDQNR I +G +R
Sbjct: 28 ACFLRSSFASAIRMESQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVR 87
Query: 174 D-----LLEKE 191
+ LLE E
Sbjct: 88 EGDILTLLESE 98
>emb|CBI29957.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 75.9 bits (185), Expect = 5e-12
Identities = 43/64 (67%), Positives = 49/64 (76%), Gaps = 9/64 (14%)
Frame = +3
Query: 27 LSSSFRMDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLRD-----L 179
LSS +M+S +KHAVVVK MGRTGSRGQVTQVRVKFLDDQNRFI +G +R+ L
Sbjct: 41 LSSQCKMESGVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTL 100
Query: 180 LEKE 191
LE E
Sbjct: 101 LESE 104
>ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus communis]
gi|255581574|ref|XP_002531592.1| ribosomal protein S28,
putative [Ricinus communis] gi|223528788|gb|EEF30795.1|
ribosomal protein S28, putative [Ricinus communis]
gi|223539919|gb|EEF41497.1| ribosomal protein S28,
putative [Ricinus communis] gi|313586485|gb|ADR71253.1|
40S ribosomal protein S28A [Hevea brasiliensis]
gi|313586487|gb|ADR71254.1| 40S ribosomal protein S28B
[Hevea brasiliensis]
Length = 65
Score = 75.9 bits (185), Expect = 5e-12
Identities = 43/58 (74%), Positives = 46/58 (79%), Gaps = 9/58 (15%)
Frame = +3
Query: 45 MDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLRD-----LLEKE 191
MDSQIKHAVVVK MGRTGSRGQVTQVRVKFLDDQNRFI +G +R+ LLE E
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDVLTLLESE 58
>gb|EMJ03959.1| hypothetical protein PRUPE_ppa013411mg [Prunus persica]
Length = 124
Score = 75.5 bits (184), Expect = 6e-12
Identities = 43/59 (72%), Positives = 46/59 (77%), Gaps = 9/59 (15%)
Frame = +3
Query: 42 RMDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLRD-----LLEKE 191
RMDS IKHAVVVK MGRTGSRGQVTQVRVKFLDDQNRFI +G +R+ LLE E
Sbjct: 59 RMDSTIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLLESE 117
>ref|XP_002311925.1| predicted protein [Populus trichocarpa]
gi|224110082|ref|XP_002315409.1| predicted protein
[Populus trichocarpa] gi|118481584|gb|ABK92734.1|
unknown [Populus trichocarpa]
gi|118481768|gb|ABK92823.1| unknown [Populus
trichocarpa] gi|118482102|gb|ABK92982.1| unknown
[Populus trichocarpa] gi|118482699|gb|ABK93268.1|
unknown [Populus trichocarpa]
gi|222851745|gb|EEE89292.1| 40S ribosomal protein S28
[Populus trichocarpa] gi|222864449|gb|EEF01580.1| 40S
ribosomal protein S28 [Populus trichocarpa]
Length = 65
Score = 75.5 bits (184), Expect = 6e-12
Identities = 42/58 (72%), Positives = 46/58 (79%), Gaps = 9/58 (15%)
Frame = +3
Query: 45 MDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLRD-----LLEKE 191
MDSQIKHAVVVK MGRTGSRGQVTQVRVKF+DDQNRFI +G +R+ LLE E
Sbjct: 1 MDSQIKHAVVVKIMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDILTLLESE 58
>gb|EOY09636.1| Nucleic acid-binding, OB-fold-like protein [Theobroma cacao]
Length = 65
Score = 74.7 bits (182), Expect = 1e-11
Identities = 42/58 (72%), Positives = 46/58 (79%), Gaps = 9/58 (15%)
Frame = +3
Query: 45 MDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLRD-----LLEKE 191
MDSQIKHAVVVK MGRTGSRGQVTQVRVKFLDDQNR+I +G +R+ LLE E
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDILTLLESE 58
>ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncatula]
gi|355493593|gb|AES74796.1| 30S ribosomal protein S28e
[Medicago truncatula]
Length = 75
Score = 74.7 bits (182), Expect = 1e-11
Identities = 42/60 (70%), Positives = 47/60 (78%), Gaps = 9/60 (15%)
Frame = +3
Query: 39 FRMDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLRD-----LLEKE 191
+RM+SQIKHAVVVK MGRTGSRGQVTQVRVKFLDDQNR I +G +R+ LLE E
Sbjct: 9 YRMESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILTLLESE 68
>ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
Length = 68
Score = 73.2 bits (178), Expect = 3e-11
Identities = 41/58 (70%), Positives = 46/58 (79%), Gaps = 9/58 (15%)
Frame = +3
Query: 45 MDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLRD-----LLEKE 191
M+SQIKHAVVVK MGRTGSRGQVTQVRVKFLDDQNR+I +G +R+ LLE E
Sbjct: 4 MESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDILTLLESE 61
>ref|XP_004138229.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
gi|449440917|ref|XP_004138230.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449440919|ref|XP_004138231.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449440921|ref|XP_004138232.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449463340|ref|XP_004149392.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449463342|ref|XP_004149393.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449477091|ref|XP_004154926.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449477094|ref|XP_004154927.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449477096|ref|XP_004154928.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449477100|ref|XP_004154929.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449503792|ref|XP_004162179.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449503794|ref|XP_004162180.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449503796|ref|XP_004162181.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
Length = 65
Score = 73.2 bits (178), Expect = 3e-11
Identities = 41/58 (70%), Positives = 46/58 (79%), Gaps = 9/58 (15%)
Frame = +3
Query: 45 MDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLRD-----LLEKE 191
M+SQIKHAVVVK MGRTGSRGQVTQVRVKFLDDQNR+I +G +R+ LLE E
Sbjct: 1 MESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDILTLLESE 58
>gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis]
Length = 65
Score = 73.2 bits (178), Expect = 3e-11
Identities = 40/58 (68%), Positives = 46/58 (79%), Gaps = 9/58 (15%)
Frame = +3
Query: 45 MDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLRD-----LLEKE 191
M+SQIKHA+VVK MGRTGSRGQVTQVRVKF+DDQNRFI +G +R+ LLE E
Sbjct: 1 MESQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLTLLESE 58
>emb|CAA10101.1| ribosomal protein S28 [Prunus persica] gi|3947721|emb|CAA10102.1|
ribosomal protein S28 [Prunus persica]
gi|3947723|emb|CAA10103.1| ribosomal protein S28 [Prunus
persica] gi|462398368|gb|EMJ04036.1| hypothetical
protein PRUPE_ppa014541mg [Prunus persica]
Length = 65
Score = 73.2 bits (178), Expect = 3e-11
Identities = 41/58 (70%), Positives = 45/58 (77%), Gaps = 9/58 (15%)
Frame = +3
Query: 45 MDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLRD-----LLEKE 191
MDS +KHAVVVK MGRTGSRGQVTQVRVKFLDDQNRFI +G +R+ LLE E
Sbjct: 1 MDSTVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLLESE 58
>ref|XP_002322747.1| predicted protein [Populus trichocarpa] gi|118481467|gb|ABK92676.1|
unknown [Populus trichocarpa]
gi|118485130|gb|ABK94428.1| unknown [Populus
trichocarpa] gi|222867377|gb|EEF04508.1| hypothetical
protein POPTR_0016s06300g [Populus trichocarpa]
Length = 65
Score = 72.8 bits (177), Expect = 4e-11
Identities = 41/58 (70%), Positives = 45/58 (77%), Gaps = 9/58 (15%)
Frame = +3
Query: 45 MDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLRD-----LLEKE 191
MDSQIKHAVV+K MGRTGSRGQVTQVRVKFLDD NRFI +G +R+ LLE E
Sbjct: 1 MDSQIKHAVVMKIMGRTGSRGQVTQVRVKFLDDPNRFIMRNVKGPVREGDVLTLLESE 58
>gb|AAM78552.1|AF522185_1 ribosomal protein small subunit 28 [Helianthus annuus]
Length = 65
Score = 72.8 bits (177), Expect = 4e-11
Identities = 41/58 (70%), Positives = 46/58 (79%), Gaps = 9/58 (15%)
Frame = +3
Query: 45 MDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLRD-----LLEKE 191
M+SQIKHAVVVK MGR+GSRGQVTQVRVKFLDDQNRFI +G +R+ LLE E
Sbjct: 1 MESQIKHAVVVKVMGRSGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDVLTLLESE 58
>ref|NP_001105548.1| 40S ribosomal protein S28 [Zea mays]
gi|1173237|sp|P46302.1|RS28_MAIZE RecName: Full=40S
ribosomal protein S28 gi|557682|emb|CAA57636.1| small
subunit ribosomal protein S28 [Zea mays]
Length = 65
Score = 67.4 bits (163), Expect(2) = 5e-11
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +3
Query: 45 MDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI 158
MD+Q+K AVVVK MGRTGSRGQVTQVRVKFLDDQNR I
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLI 38
Score = 25.4 bits (54), Expect(2) = 5e-11
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 161 RNVKGPVREGDV 196
RNVKGPV EGD+
Sbjct: 40 RNVKGPVCEGDI 51
>gb|ESW17738.1| hypothetical protein PHAVU_007G264100g [Phaseolus vulgaris]
Length = 65
Score = 72.4 bits (176), Expect = 5e-11
Identities = 40/58 (68%), Positives = 45/58 (77%), Gaps = 9/58 (15%)
Frame = +3
Query: 45 MDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLRD-----LLEKE 191
MDSQ+KHA+VVK MGRTGSRGQVTQVRVKFLDDQNR I +G +R+ LLE E
Sbjct: 1 MDSQVKHAIVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILTLLESE 58
>gb|ACG26633.1| 40S ribosomal protein S28 [Zea mays]
Length = 65
Score = 66.2 bits (160), Expect(2) = 7e-11
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +3
Query: 45 MDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI 158
MD+Q+K AVVVK MGRTGSRGQVTQV+VKFLDDQNR I
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVKVKFLDDQNRLI 38
Score = 26.2 bits (56), Expect(2) = 7e-11
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 161 RNVKGPVREGDV 196
RNV GPVREGD+
Sbjct: 40 RNVXGPVREGDI 51
>gb|ABY77634.1| At5g03850 [Arabidopsis thaliana] gi|166007603|gb|ABY77635.1|
At5g03850 [Arabidopsis thaliana]
gi|166007605|gb|ABY77636.1| At5g03850 [Arabidopsis
thaliana] gi|166007607|gb|ABY77637.1| At5g03850
[Arabidopsis thaliana] gi|166007609|gb|ABY77638.1|
At5g03850 [Arabidopsis thaliana]
gi|166007611|gb|ABY77639.1| At5g03850 [Arabidopsis
thaliana] gi|166007613|gb|ABY77640.1| At5g03850
[Arabidopsis thaliana] gi|166007615|gb|ABY77641.1|
At5g03850 [Arabidopsis thaliana]
gi|166007617|gb|ABY77642.1| At5g03850 [Arabidopsis
thaliana] gi|166007619|gb|ABY77643.1| At5g03850
[Arabidopsis thaliana] gi|166007621|gb|ABY77644.1|
At5g03850 [Arabidopsis thaliana]
gi|166007623|gb|ABY77645.1| At5g03850 [Arabidopsis
thaliana] gi|166007625|gb|ABY77646.1| At5g03850
[Arabidopsis thaliana] gi|166007627|gb|ABY77647.1|
At5g03850 [Arabidopsis thaliana]
gi|166007629|gb|ABY77648.1| At5g03850 [Arabidopsis
thaliana] gi|166007631|gb|ABY77649.1| At5g03850
[Arabidopsis thaliana] gi|166007633|gb|ABY77650.1|
At5g03850 [Arabidopsis thaliana]
gi|166007635|gb|ABY77651.1| At5g03850 [Arabidopsis
thaliana] gi|166007637|gb|ABY77652.1| At5g03850
[Arabidopsis thaliana] gi|166007639|gb|ABY77653.1|
At5g03850 [Arabidopsis thaliana]
gi|166007641|gb|ABY77654.1| At5g03850 [Arabidopsis
thaliana] gi|166007643|gb|ABY77655.1| At5g03850
[Arabidopsis thaliana] gi|166007645|gb|ABY77656.1|
At5g03850-like protein [Arabidopsis lyrata]
Length = 52
Score = 63.2 bits (152), Expect(2) = 7e-11
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = +3
Query: 45 MDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFIRGM 167
MDSQIKHAVVVK MGRTGSRGQVTQVRVKF D +R +
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFTDSDRYIMRNV 41
Score = 29.3 bits (64), Expect(2) = 7e-11
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 152 FYQRNVKGPVREGDV 196
+ RNVKGPVREGD+
Sbjct: 36 YIMRNVKGPVREGDI 50
>gb|ESW35015.1| hypothetical protein PHAVU_001G199400g [Phaseolus vulgaris]
Length = 65
Score = 71.6 bits (174), Expect = 9e-11
Identities = 40/58 (68%), Positives = 45/58 (77%), Gaps = 9/58 (15%)
Frame = +3
Query: 45 MDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLRD-----LLEKE 191
MDSQ+KHA+VVK MGRTGSRGQVTQVRVKFLDDQNR I +G +R+ LLE E
Sbjct: 1 MDSQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILTLLESE 58
>ref|XP_004489433.1| PREDICTED: 40S ribosomal protein S28-like [Cicer arietinum]
gi|124359133|gb|ABD32492.2| Ribosomal protein S28e
[Medicago truncatula] gi|388522463|gb|AFK49293.1|
unknown [Medicago truncatula]
Length = 65
Score = 71.6 bits (174), Expect = 9e-11
Identities = 41/58 (70%), Positives = 45/58 (77%), Gaps = 9/58 (15%)
Frame = +3
Query: 45 MDSQIKHAVVVKFMGRTGSRGQVTQVRVKFLDDQNRFI----RGMLRD-----LLEKE 191
M+SQIKHAVVVK MGRTGSRGQVTQVRVKFLDDQNR I +G +R+ LLE E
Sbjct: 1 MESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILTLLESE 58