BLASTX nr result

ID: Jatropha_contig00009850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00009850
         (518 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533150.1| serine/arginine rich splicing factor, putati...    57   2e-06

>ref|XP_002533150.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223527045|gb|EEF29231.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 265

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/83 (44%), Positives = 38/83 (45%)
 Frame = -2

Query: 514 RRHAEHLRSXXXXXXXXXXGHIRRSYSPXXXXXXXXXXXXXXGEKPAYDSEEARAWRQXX 335
           RRHA+H RS           HI RSYSP              GEKPAYD EEARAWR   
Sbjct: 190 RRHADHARSPSGLPPGRDGDHIHRSYSPGYRPDGPDGYGPGYGEKPAYDPEEARAWR--- 246

Query: 334 XXXXXXXXXXXXXXADLSPRRSR 266
                         ADLSPRRSR
Sbjct: 247 ----PSPSGSRSRSADLSPRRSR 265


Top