BLASTX nr result

ID: Jatropha_contig00009780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00009780
         (478 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat...   106   3e-39
gb|AGC78944.1| hypothetical protein (mitochondrion) [Vicia faba]      124   9e-27
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...    91   1e-16
gb|EPS74490.1| hypothetical protein M569_00256 [Genlisea aurea]        59   8e-07

>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
           gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
           [Medicago truncatula]
          Length = 1116

 Score =  106 bits (264), Expect(2) = 3e-39
 Identities = 55/72 (76%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
 Frame = +1

Query: 220 KRTLESAS--KGAGSPLTDSTATCWHXXXXXXXXXXXXXHFGCKDFLLRRMSQQHKTRVS 393
           +RTLESAS  KGAGS LTDSTATCWH             HFGCKDFLLRRMSQQHKTRVS
Sbjct: 772 QRTLESASNSKGAGSLLTDSTATCWHSISSAGASLGSSAHFGCKDFLLRRMSQQHKTRVS 831

Query: 394 LVIGLDQTSHDT 429
           LVIGLDQTSHDT
Sbjct: 832 LVIGLDQTSHDT 843



 Score = 81.3 bits (199), Expect(2) = 3e-39
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = +2

Query: 5   LFVSEPFWRGVLNPLRTTPPGGSPECRVFLRRQLDVVVTCK 127
           LF S  FWRGVLNPLRTTPPGGSPECRVFLRRQLDVV+TCK
Sbjct: 705 LFRSRLFWRGVLNPLRTTPPGGSPECRVFLRRQLDVVLTCK 745


>gb|AGC78944.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 134

 Score =  124 bits (312), Expect = 9e-27
 Identities = 72/121 (59%), Positives = 74/121 (61%), Gaps = 16/121 (13%)
 Frame = +1

Query: 118 HLQDKAKNWTLLNKREK--------------PXXXXXXXXXXXXXIFLKRTLESAS--KG 249
           HLQ+KAKNWTLLNKRE                             I  +RTLESAS  KG
Sbjct: 14  HLQEKAKNWTLLNKRENFLFSKATSKGLSCAKAAFAHPFSCSLAAIKKQRTLESASNSKG 73

Query: 250 AGSPLTDSTATCWHXXXXXXXXXXXXXHFGCKDFLLRRMSQQHKTRVSLVIGLDQTSHDT 429
           AGS LTDSTATCWH             HFGCKDFLLRRMSQQHKTRVSLVIGLDQTSHDT
Sbjct: 74  AGSLLTDSTATCWHSISSAGASLGSSAHFGCKDFLLRRMSQQHKTRVSLVIGLDQTSHDT 133

Query: 430 S 432
           S
Sbjct: 134 S 134


>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 44/45 (97%), Positives = 44/45 (97%)
 Frame = -2

Query: 456 TGAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG 322
           T AAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG
Sbjct: 315 TSAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG 359


>gb|EPS74490.1| hypothetical protein M569_00256 [Genlisea aurea]
          Length = 184

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 35/58 (60%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
 Frame = -3

Query: 365 MRLRRKSLQPK*AEEPSDVPALLIECQHVAVLSVRGEP---APFEALSSVRFRKIAAS 201
           MRLRRKS QPK AEEPSDVPALLIECQH AV +    P   AP E    V   +  AS
Sbjct: 1   MRLRRKSFQPKRAEEPSDVPALLIECQHYAVSNKYAPPKLRAPEERKRRVPHSRRTAS 58


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