BLASTX nr result

ID: Jatropha_contig00009670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00009670
         (429 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522447.1| zinc finger protein, putative [Ricinus commu...   164   8e-39
ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|1...   159   3e-37
ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36
gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]      155   4e-36
gb|ABK95155.1| unknown [Populus trichocarpa]                          143   3e-32
gb|EOY01904.1| RING/U-box superfamily protein, putative [Theobro...   138   8e-31
emb|CBI31948.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   135   7e-30
gb|ESR51945.1| hypothetical protein CICLE_v10032639mg [Citrus cl...   124   9e-27
gb|EMJ25125.1| hypothetical protein PRUPE_ppa011037mg [Prunus pe...   120   1e-25
ref|XP_003518735.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   120   1e-25
gb|ACU13632.1| unknown [Glycine max]                                  120   1e-25
gb|AFK38844.1| unknown [Lotus japonicus]                              115   7e-24
ref|XP_003517795.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   106   3e-21
ref|XP_003613816.1| RING finger protein [Medicago truncatula] gi...   102   5e-20
ref|XP_006305588.1| hypothetical protein CARUB_v10010252mg [Caps...    97   2e-18
gb|AAM63417.1| unknown [Arabidopsis thaliana]                          97   2e-18
ref|NP_564263.1| RING/U-box domain-containing protein [Arabidops...    97   3e-18
ref|XP_002890641.1| zinc finger family protein [Arabidopsis lyra...    96   6e-18
ref|XP_006355109.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    92   5e-17

>ref|XP_002522447.1| zinc finger protein, putative [Ricinus communis]
           gi|223538332|gb|EEF39939.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 233

 Score =  164 bits (416), Expect = 8e-39
 Identities = 83/120 (69%), Positives = 99/120 (82%)
 Frame = +1

Query: 70  MASGTDLPELSSAFERILTQRDLSLFLPFFLGFATTTTTSERENPDQEPPQTATPGERII 249
           MAS T +PELSSAFER L  RDLSLFLPF LGF +TTT +  ENPDQE  +T +  ERII
Sbjct: 1   MASETQVPELSSAFERFLRHRDLSLFLPFILGFTSTTTNTNTENPDQENQETTSRHERII 60

Query: 250 LINPFTQGMVVIEGTANLDSLLRDLGSKSGQPPASKASIEAIPSVEIKETGGDKDSECVI 429
           LINPFTQGMVVIEGT +LDSLLR+L +K+G PPAS+ASIE++PSV+++E  GD+DSEC I
Sbjct: 61  LINPFTQGMVVIEGTESLDSLLRELAAKNGHPPASRASIESLPSVDVQEI-GDRDSECAI 119


>ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|118483434|gb|ABK93617.1|
           unknown [Populus trichocarpa]
           gi|222865173|gb|EEF02304.1| zinc finger family protein
           [Populus trichocarpa]
          Length = 218

 Score =  159 bits (402), Expect = 3e-37
 Identities = 85/121 (70%), Positives = 96/121 (79%), Gaps = 1/121 (0%)
 Frame = +1

Query: 70  MASGTDLP-ELSSAFERILTQRDLSLFLPFFLGFATTTTTSERENPDQEPPQTATPGERI 246
           MAS T+ P E SS FER+L  RDLSLFLPF LGF +T TT +R+ PDQE PQT  P ERI
Sbjct: 1   MASETEFPAEFSSMFERLLRHRDLSLFLPFILGFTSTNTTEQRD-PDQEAPQTTDPNERI 59

Query: 247 ILINPFTQGMVVIEGTANLDSLLRDLGSKSGQPPASKASIEAIPSVEIKETGGDKDSECV 426
           ILINPFTQGMVVIEG A+L+SLLRD+G+K GQPPASKASIEA+P VEI E   +KD EC 
Sbjct: 60  ILINPFTQGMVVIEGAASLESLLRDIGNKKGQPPASKASIEAMPKVEIGE--DNKDGECA 117

Query: 427 I 429
           I
Sbjct: 118 I 118


>ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|222851125|gb|EEE88672.1|
           zinc finger family protein [Populus trichocarpa]
          Length = 225

 Score =  155 bits (393), Expect = 4e-36
 Identities = 86/121 (71%), Positives = 98/121 (80%), Gaps = 1/121 (0%)
 Frame = +1

Query: 70  MASGTDLP-ELSSAFERILTQRDLSLFLPFFLGFATTTTTSERENPDQEPPQTATPGERI 246
           MAS T+LP ELSS FER+L  RDLSLFLPF  GF +T +T ER+ PDQEP QT  P ERI
Sbjct: 1   MASETELPAELSSMFERLLRHRDLSLFLPFIFGFTSTNSTEERD-PDQEP-QTTDPNERI 58

Query: 247 ILINPFTQGMVVIEGTANLDSLLRDLGSKSGQPPASKASIEAIPSVEIKETGGDKDSECV 426
           ILINP TQGMVVIEG A+L+SLLRD+G+K+GQPPASKASIEA+PSVEI E   +KD EC 
Sbjct: 59  ILINPLTQGMVVIEGAASLESLLRDIGNKNGQPPASKASIEAMPSVEIGE--DNKDGECA 116

Query: 427 I 429
           I
Sbjct: 117 I 117


>gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 225

 Score =  155 bits (393), Expect = 4e-36
 Identities = 86/121 (71%), Positives = 98/121 (80%), Gaps = 1/121 (0%)
 Frame = +1

Query: 70  MASGTDLP-ELSSAFERILTQRDLSLFLPFFLGFATTTTTSERENPDQEPPQTATPGERI 246
           MAS T+LP ELSS FER+L  RDLSLFLPF  GF +T +T ER+ PDQEP QT  P ERI
Sbjct: 1   MASETELPAELSSMFERLLRHRDLSLFLPFIFGFTSTNSTEERD-PDQEP-QTTDPNERI 58

Query: 247 ILINPFTQGMVVIEGTANLDSLLRDLGSKSGQPPASKASIEAIPSVEIKETGGDKDSECV 426
           ILINP TQGMVVIEG A+L+SLLRD+G+K+GQPPASKASIEA+PSVEI E   +KD EC 
Sbjct: 59  ILINPLTQGMVVIEGAASLESLLRDMGNKNGQPPASKASIEAMPSVEIGE--DNKDGECA 116

Query: 427 I 429
           I
Sbjct: 117 I 117


>gb|ABK95155.1| unknown [Populus trichocarpa]
          Length = 212

 Score =  143 bits (360), Expect = 3e-32
 Identities = 76/107 (71%), Positives = 87/107 (81%)
 Frame = +1

Query: 109 FERILTQRDLSLFLPFFLGFATTTTTSERENPDQEPPQTATPGERIILINPFTQGMVVIE 288
           FER+L  RDLSLFLPF  GF +T +T ER+ PDQEP QT  P ERIILINP TQGMVVIE
Sbjct: 2   FERLLRHRDLSLFLPFIFGFTSTNSTEERD-PDQEP-QTTDPNERIILINPLTQGMVVIE 59

Query: 289 GTANLDSLLRDLGSKSGQPPASKASIEAIPSVEIKETGGDKDSECVI 429
           G A+L+SLLRD+G+K+GQPPASKASIEA+PSVEI E   +KD EC I
Sbjct: 60  GAASLESLLRDIGNKNGQPPASKASIEAMPSVEIGE--DNKDGECAI 104


>gb|EOY01904.1| RING/U-box superfamily protein, putative [Theobroma cacao]
          Length = 227

 Score =  138 bits (347), Expect = 8e-31
 Identities = 77/126 (61%), Positives = 92/126 (73%), Gaps = 6/126 (4%)
 Frame = +1

Query: 70  MASGTDLPELSSAFERILTQRDLSLFLPFFLGFATTTTTSE--RENP---DQEPPQ-TAT 231
           MAS T+ PE+SS FER+L  RDL  FLPF LGF++  + +   RENP   DQE PQ T +
Sbjct: 1   MASETEAPEISSLFERLLRHRDLYFFLPFILGFSSNNSNNSVSRENPEDPDQESPQETTS 60

Query: 232 PGERIILINPFTQGMVVIEGTANLDSLLRDLGSKSGQPPASKASIEAIPSVEIKETGGDK 411
             ERIILINPFTQGMVVIEG +NL++LLR   +K GQPPASK SIEA+PSVEI   G  +
Sbjct: 61  QRERIILINPFTQGMVVIEGASNLEALLRSWANKDGQPPASKTSIEAMPSVEI---GESE 117

Query: 412 DSECVI 429
           D ECV+
Sbjct: 118 DGECVV 123


>emb|CBI31948.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score =  136 bits (343), Expect = 2e-30
 Identities = 74/129 (57%), Positives = 95/129 (73%), Gaps = 5/129 (3%)
 Frame = +1

Query: 58  TISKMASGTDLPELSSA---FERILTQR--DLSLFLPFFLGFATTTTTSERENPDQEPPQ 222
           ++ +MAS ++    SS+    ER+++ R  DLS+F+PF LGF  TTT  E ++PD E   
Sbjct: 111 SLEEMASESEASGASSSASFLERLISSRNRDLSMFIPFILGFTDTTTRQESDDPDDETTD 170

Query: 223 TATPGERIILINPFTQGMVVIEGTANLDSLLRDLGSKSGQPPASKASIEAIPSVEIKETG 402
           T TP +RIILINPFTQGM+VIEG ++ DSLLR+L SK GQPPA+KASIEA+PSVE+   G
Sbjct: 171 TPTPRDRIILINPFTQGMIVIEGNSSFDSLLRELASKGGQPPATKASIEAMPSVEV---G 227

Query: 403 GDKDSECVI 429
           GD D ECVI
Sbjct: 228 GD-DGECVI 235


>ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 233

 Score =  135 bits (339), Expect = 7e-30
 Identities = 74/125 (59%), Positives = 92/125 (73%), Gaps = 5/125 (4%)
 Frame = +1

Query: 70  MASGTDLPELSSA---FERILTQR--DLSLFLPFFLGFATTTTTSERENPDQEPPQTATP 234
           MAS ++    SS+    ER+++ R  DLS+F+PF LGF  TTT  E ++PD E   T TP
Sbjct: 1   MASESEASGASSSASFLERLISSRNRDLSMFIPFILGFTDTTTRQESDDPDDETTDTPTP 60

Query: 235 GERIILINPFTQGMVVIEGTANLDSLLRDLGSKSGQPPASKASIEAIPSVEIKETGGDKD 414
            +RIILINPFTQGM+VIEG ++ DSLLR+L SK GQPPA+KASIEA+PSVE+   GGD D
Sbjct: 61  RDRIILINPFTQGMIVIEGNSSFDSLLRELASKGGQPPATKASIEAMPSVEV---GGD-D 116

Query: 415 SECVI 429
            ECVI
Sbjct: 117 GECVI 121


>gb|ESR51945.1| hypothetical protein CICLE_v10032639mg [Citrus clementina]
          Length = 232

 Score =  124 bits (312), Expect = 9e-27
 Identities = 65/126 (51%), Positives = 91/126 (72%), Gaps = 6/126 (4%)
 Frame = +1

Query: 70  MASGTDLPELSSAFERILTQRDLSLFLPFFLGFATTTTTSER----ENPDQEPPQT-ATP 234
           M+S  +  ++SS FER+L+ RD+SLFLPF LGF ++ +T E     +NPD E P T  + 
Sbjct: 1   MSSEAEATDVSSLFERLLSHRDMSLFLPFVLGFTSSVSTGESSENSQNPDGETPHTNRSS 60

Query: 235 GERIILINPFTQGMVVIEGTANLDSLLRDLGSKSGQPPASKASIEAIPSVEIKETGGDK- 411
            ERIIL+NP  QGMVVIEGT++L++LLR+   K GQPPASKAS+EA+PS+++ E+  +  
Sbjct: 61  SERIILVNPLNQGMVVIEGTSSLETLLRNFVGKDGQPPASKASVEAMPSIKVGESEEEAL 120

Query: 412 DSECVI 429
             ECV+
Sbjct: 121 GGECVV 126


>gb|EMJ25125.1| hypothetical protein PRUPE_ppa011037mg [Prunus persica]
          Length = 226

 Score =  120 bits (302), Expect = 1e-25
 Identities = 68/125 (54%), Positives = 86/125 (68%), Gaps = 5/125 (4%)
 Frame = +1

Query: 70  MASGTDLPELSSAFERILTQRDLSLFLPFFLGFATTTTTSERE-----NPDQEPPQTATP 234
           MAS  +  E++S FERI+ +RDLSLF+PF LG A+ T  ++ E     NPDQE P   TP
Sbjct: 1   MASEAEASEIASFFERIVRERDLSLFVPFILGLASATPRTDPENPDHDNPDQENPGRPTP 60

Query: 235 GERIILINPFTQGMVVIEGTANLDSLLRDLGSKSGQPPASKASIEAIPSVEIKETGGDKD 414
            ER+I INPF Q M+V+EG +     L++LG K GQPPASKASI+A+P V+I E  GD  
Sbjct: 61  HERLIFINPFAQTMMVVEGDS-----LQELGMKDGQPPASKASIDAMPCVKIVE--GDGG 113

Query: 415 SECVI 429
           SECVI
Sbjct: 114 SECVI 118


>ref|XP_003518735.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 231

 Score =  120 bits (302), Expect = 1e-25
 Identities = 66/123 (53%), Positives = 87/123 (70%), Gaps = 3/123 (2%)
 Frame = +1

Query: 70  MASGTDLPEL-SSAFERILTQRDLSLFLPFFLGFATTTTTSERENPDQEPPQTATP-GER 243
           MAS T++P++ SS FER    RD+SLFLPF  GF+  T     ++PD E   T  P  +R
Sbjct: 1   MASETEVPDIISSVFERFQQNRDMSLFLPFLFGFSDATPGRNSDDPDHETAPTEAPQRQR 60

Query: 244 IILINPFTQGMVVIEGTANLDSLLRDL-GSKSGQPPASKASIEAIPSVEIKETGGDKDSE 420
           IIL+NP TQGMVVI+G ++L++L R+    K G+PPASK SIEA+PSVEI E  G++DSE
Sbjct: 61  IILVNPLTQGMVVIDGGSSLEALFREFTNGKGGRPPASKESIEALPSVEIGE--GNEDSE 118

Query: 421 CVI 429
           CV+
Sbjct: 119 CVV 121


>gb|ACU13632.1| unknown [Glycine max]
          Length = 187

 Score =  120 bits (302), Expect = 1e-25
 Identities = 66/123 (53%), Positives = 87/123 (70%), Gaps = 3/123 (2%)
 Frame = +1

Query: 70  MASGTDLPEL-SSAFERILTQRDLSLFLPFFLGFATTTTTSERENPDQEPPQTATP-GER 243
           MAS T++P++ SS FER    RD+SLFLPF  GF+  T     ++PD E   T  P  +R
Sbjct: 1   MASETEVPDIISSVFERFQQNRDMSLFLPFLFGFSDATPGRNSDDPDHETAPTEAPQRQR 60

Query: 244 IILINPFTQGMVVIEGTANLDSLLRDL-GSKSGQPPASKASIEAIPSVEIKETGGDKDSE 420
           IIL+NP TQGMVVI+G ++L++L R+    K G+PPASK SIEA+PSVEI E  G++DSE
Sbjct: 61  IILVNPLTQGMVVIDGGSSLEALFREFTNGKGGRPPASKESIEALPSVEIGE--GNEDSE 118

Query: 421 CVI 429
           CV+
Sbjct: 119 CVV 121


>gb|AFK38844.1| unknown [Lotus japonicus]
          Length = 232

 Score =  115 bits (287), Expect = 7e-24
 Identities = 62/123 (50%), Positives = 87/123 (70%), Gaps = 4/123 (3%)
 Frame = +1

Query: 73  ASGTDLPELSSAFERILTQRDLSLFLPFFLGFATTTTTSERENPDQEPP-QTATPGERII 249
           +S +D  E+SS FER+   RD+S+FLPF  G + +  +   ++PDQE   +     +RII
Sbjct: 3   SSDSDAAEISSLFERLFRTRDVSMFLPFLFGLSESRNS---DDPDQETESEEGFQRQRII 59

Query: 250 LINPFTQGMVVIEGTANLDSLLRDLGS---KSGQPPASKASIEAIPSVEIKETGGDKDSE 420
           L+NPFTQGMVVI+G ++L++L R+LGS   K G+PPASK SI+A+PSVE+ E G D D E
Sbjct: 60  LVNPFTQGMVVIDGASSLEALFRELGSAANKGGRPPASKESIDAMPSVEVGE-GDDDDGE 118

Query: 421 CVI 429
           CV+
Sbjct: 119 CVV 121


>ref|XP_003517795.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 229

 Score =  106 bits (265), Expect = 3e-21
 Identities = 63/123 (51%), Positives = 87/123 (70%), Gaps = 3/123 (2%)
 Frame = +1

Query: 70  MASGTD-LPELSSAFERILTQRDLSLFLPFFLGFATTTTTSERENPDQEPPQT-ATPGER 243
           MAS T+ L  +SS FER   +R++SLFLPF  GF+  T+  + ++PD E   T  +  +R
Sbjct: 1   MASETEVLNIISSVFERF--ERNMSLFLPFIFGFSDATSGRDSDDPDHETAHTEGSLRQR 58

Query: 244 IILINPFTQGMVVIEGTANLDSLLRDLGS-KSGQPPASKASIEAIPSVEIKETGGDKDSE 420
           IIL+NP TQGMVVI+G  +L++L R+L + K G+PPASK SIEA+PSVEI E   ++D E
Sbjct: 59  IILVNPLTQGMVVIDGGLSLEALFRELANGKGGRPPASKESIEALPSVEIGE--DNEDLE 116

Query: 421 CVI 429
           CV+
Sbjct: 117 CVV 119


>ref|XP_003613816.1| RING finger protein [Medicago truncatula]
           gi|355515151|gb|AES96774.1| RING finger protein
           [Medicago truncatula]
          Length = 222

 Score =  102 bits (254), Expect = 5e-20
 Identities = 55/122 (45%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
 Frame = +1

Query: 70  MASGTDLPELSSAFERILTQRDLSLFLPFFLGFATTTTTSERENPDQEPPQTATPGERII 249
           MAS  ++ E+SS FER++  RD+SLFLPF L  + T   S+ ++ + E  + +TP +RII
Sbjct: 1   MASEAEISEISSLFERMIRNRDMSLFLPFMLSLSQTLNNSDPDH-ESETNEDSTP-QRII 58

Query: 250 LINPFTQGMVVIEGTANLDSLLRDLGS--KSGQPPASKASIEAIPSVEIKETGGDKDSEC 423
            +NP TQ + VI+G ++++ L  +LGS  K+GQPPA+K SIEA+  +EI+E  G    EC
Sbjct: 59  FVNPLTQSITVIDGASSIEELFNNLGSSTKNGQPPATKESIEAMDKIEIEEGDG---GEC 115

Query: 424 VI 429
           V+
Sbjct: 116 VV 117


>ref|XP_006305588.1| hypothetical protein CARUB_v10010252mg [Capsella rubella]
           gi|482574299|gb|EOA38486.1| hypothetical protein
           CARUB_v10010252mg [Capsella rubella]
          Length = 219

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 59/114 (51%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
 Frame = +1

Query: 94  ELSSAFERILTQRDLSLFLPFFLGFATTTTTSERENPDQEPPQTATPGERIILINPFTQG 273
           E SS   R L  RDL LFLPF LGF+    ++  +  D +    A+  ERIIL+NPFTQG
Sbjct: 12  ETSSVSGRFLRNRDLYLFLPFLLGFSDQEPSNRDD--DDDDGGVASSRERIILVNPFTQG 69

Query: 274 MVVIEGTANLDSLLRDL--GSKSGQPPASKASIEAIPSVEIKETGGDKDSECVI 429
           MVV+EG++ L+ LLR+L    + G+PPASKASIEA+P VEI    G    ECVI
Sbjct: 70  MVVLEGSSGLNPLLRNLLESREEGRPPASKASIEAMPVVEIDGCEG----ECVI 119


>gb|AAM63417.1| unknown [Arabidopsis thaliana]
          Length = 204

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 58/119 (48%), Positives = 77/119 (64%), Gaps = 2/119 (1%)
 Frame = +1

Query: 79  GTDLPELSSAFERILTQRDLSLFLPFFLGFATTTTTSERENPDQEPPQTATPGERIILIN 258
           GT+ P +S  F   L  RDL LFLPF LGF      S++E+ + +    A+  ERIIL+N
Sbjct: 10  GTETPSVSGRF---LRNRDLYLFLPFLLGF------SDQESSNGDDDDVASSRERIILVN 60

Query: 259 PFTQGMVVIEGTANLDSLLRDL--GSKSGQPPASKASIEAIPSVEIKETGGDKDSECVI 429
           PFTQGM+V+EG++ ++ LLR L    + G+PPASKASI+A+P VEI    G    ECVI
Sbjct: 61  PFTQGMIVLEGSSGMNPLLRSLLESREEGRPPASKASIDAMPIVEIDGCEG----ECVI 115


>ref|NP_564263.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|9295734|gb|AAF87040.1|AC006535_18 T24P13.19
           [Arabidopsis thaliana]
           gi|13605625|gb|AAK32806.1|AF361638_1 At1g26800/T24P13_21
           [Arabidopsis thaliana] gi|15450675|gb|AAK96609.1|
           At1g26800/T24P13_21 [Arabidopsis thaliana]
           gi|15777873|gb|AAL05897.1| At1g26800/T24P13_21
           [Arabidopsis thaliana] gi|332192622|gb|AEE30743.1|
           RING/U-box domain-containing protein [Arabidopsis
           thaliana]
          Length = 204

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 57/114 (50%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
 Frame = +1

Query: 94  ELSSAFERILTQRDLSLFLPFFLGFATTTTTSERENPDQEPPQTATPGERIILINPFTQG 273
           E SS   R L  RDL LFLPF LGF      S++E+ + +    A+  ERIIL+NPFTQG
Sbjct: 12  ETSSVSGRFLRNRDLYLFLPFLLGF------SDQESSNGDDDDVASSRERIILVNPFTQG 65

Query: 274 MVVIEGTANLDSLLRDL--GSKSGQPPASKASIEAIPSVEIKETGGDKDSECVI 429
           M+V+EG++ ++ LLR L    + G+PPASKASI+A+P VEI    G    ECVI
Sbjct: 66  MIVLEGSSGMNPLLRSLLESREEGRPPASKASIDAMPIVEIDGCEG----ECVI 115


>ref|XP_002890641.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336483|gb|EFH66900.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 204

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
 Frame = +1

Query: 94  ELSSAFERILTQRDLSLFLPFFLGFATTTTTSERENPDQEPPQTATPGERIILINPFTQG 273
           E SS   R L  RDL LFLPF LGF      S++E  + +    A+  ERIIL+NPFTQG
Sbjct: 12  ETSSTSGRFLRNRDLYLFLPFLLGF------SDQEPSNGDDDDVASSRERIILVNPFTQG 65

Query: 274 MVVIEGTANLDSLLRDL--GSKSGQPPASKASIEAIPSVEIKETGGDKDSECVI 429
           M+V+EG++ ++ LLRD+    + G+PPASKASI+A+P V+I    G    ECVI
Sbjct: 66  MIVLEGSSGMNPLLRDILESREEGRPPASKASIDAMPIVQIDGYEG----ECVI 115


>ref|XP_006355109.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum
           tuberosum]
          Length = 207

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 60/127 (47%), Positives = 79/127 (62%), Gaps = 7/127 (5%)
 Frame = +1

Query: 70  MASGTDLPELSSAFERILTQR--DLSLFLPFFLGFATTTTTSERENPDQEPPQTATPGE- 240
           MAS ++   +SS  E ++  R  DLSLFLPF L     + +S   NPD+E  ++ T  E 
Sbjct: 1   MASESE--SVSSLMENLMNSRNIDLSLFLPFILSITNNSISS---NPDEETDESTTQSEF 55

Query: 241 --RIILINPFTQGMVVIE--GTANLDSLLRDLGSKSGQPPASKASIEAIPSVEIKETGGD 408
             RIIL+NP TQ M+V+E   +  LDS L +L SK GQPPASKASI+A+ +VEI E G  
Sbjct: 56  SDRIILVNPLTQNMIVMETRSSTTLDSFLNELMSKEGQPPASKASIDALSTVEICEEG-- 113

Query: 409 KDSECVI 429
           +  EC I
Sbjct: 114 EKGECSI 120


Top