BLASTX nr result

ID: Jatropha_contig00009527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00009527
         (526 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...    97   2e-18
ref|XP_002535169.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|YP_173386.1| hypothetical protein NitaMp040 [Nicotiana tabac...    59   3e-08

>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 45/48 (93%), Positives = 46/48 (95%), Gaps = 1/48 (2%)
 Frame = -3

Query: 152 HF-PSCSSIGNQDKPGTTVRRENTRSHSDLDMWNRLAPYVXRLFGRHG 12
           HF PSCSSIGNQDKPGTTVRRENTRSHSDLDMWNRLAPYV +LFGRHG
Sbjct: 556 HFVPSCSSIGNQDKPGTTVRRENTRSHSDLDMWNRLAPYVLKLFGRHG 603


>ref|XP_002535169.1| conserved hypothetical protein [Ricinus communis]
           gi|223523841|gb|EEF27214.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 84

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 42/43 (97%), Positives = 42/43 (97%)
 Frame = +3

Query: 3   RAWTMSPEQSXYIWRKTIPHIEVGMGSGVFTSYRSARFVLIPD 131
           RAWTMSPEQS YIWRKTIPHIEVGMGSGVFTSYRSARFVLIPD
Sbjct: 42  RAWTMSPEQSQYIWRKTIPHIEVGMGSGVFTSYRSARFVLIPD 84


>ref|YP_173386.1| hypothetical protein NitaMp040 [Nicotiana tabacum]
           gi|56806549|dbj|BAD83450.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 108

 Score = 58.5 bits (140), Expect(2) = 3e-08
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +3

Query: 165 FVTRPRLRVLWTLRPPAASGSKLAPYVG 248
           F+TRPRLRVLWTLRPPA SGSKLAPYVG
Sbjct: 11  FLTRPRLRVLWTLRPPATSGSKLAPYVG 38



 Score = 25.0 bits (53), Expect(2) = 3e-08
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +2

Query: 134 MNKKENGTIGFCDSP 178
           MNKKENGTI F   P
Sbjct: 1   MNKKENGTILFLTRP 15


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