BLASTX nr result

ID: Jatropha_contig00009418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00009418
         (237 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532732.1| RNA binding protein, putative [Ricinus commu...    64   3e-08
gb|ESR56793.1| hypothetical protein CICLE_v10020020mg [Citrus cl...    63   4e-08
gb|EEE82335.2| hypothetical protein POPTR_0002s24800g [Populus t...    58   1e-06
gb|ERP64677.1| hypothetical protein POPTR_0002s24800g [Populus t...    58   1e-06
ref|XP_002303062.1| predicted protein [Populus trichocarpa]            58   1e-06
gb|EOX93849.1| Nuclear transport factor 2 family protein with RN...    56   5e-06

>ref|XP_002532732.1| RNA binding protein, putative [Ricinus communis]
           gi|223527509|gb|EEF29634.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 478

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 34/56 (60%), Positives = 38/56 (67%)
 Frame = +1

Query: 4   RNSNSLGFFNTVEAPVNPGQDLPSVQENHISEQPIALSEEANGEEVYDPSENGDGS 171
           + + +L   N VEAPV   QD    QENHISEQP ALS+EAN EEV DPSEN D S
Sbjct: 141 QQNENLNVVNIVEAPVAAEQDSAYEQENHISEQPAALSDEANEEEVCDPSENEDVS 196


>gb|ESR56793.1| hypothetical protein CICLE_v10020020mg [Citrus clementina]
          Length = 469

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 29/47 (61%), Positives = 35/47 (74%)
 Frame = +1

Query: 31  NTVEAPVNPGQDLPSVQENHISEQPIALSEEANGEEVYDPSENGDGS 171
           N VEAP+ P QD   VQENH+S+Q    SEE +GEEV +PSENGDG+
Sbjct: 144 NDVEAPITPDQDHSPVQENHVSDQTAISSEEVSGEEVDNPSENGDGT 190


>gb|EEE82335.2| hypothetical protein POPTR_0002s24800g [Populus trichocarpa]
          Length = 402

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/44 (65%), Positives = 31/44 (70%)
 Frame = +1

Query: 40  EAPVNPGQDLPSVQENHISEQPIALSEEANGEEVYDPSENGDGS 171
           EAPV P QD P  QE HISE   ALSEE  G EVY+PSE+GD S
Sbjct: 150 EAPVAPDQDTPHTQETHISEPTAALSEEVIGGEVYNPSESGDVS 193


>gb|ERP64677.1| hypothetical protein POPTR_0002s24800g [Populus trichocarpa]
          Length = 511

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/44 (65%), Positives = 31/44 (70%)
 Frame = +1

Query: 40  EAPVNPGQDLPSVQENHISEQPIALSEEANGEEVYDPSENGDGS 171
           EAPV P QD P  QE HISE   ALSEE  G EVY+PSE+GD S
Sbjct: 150 EAPVAPDQDTPHTQETHISEPTAALSEEVIGGEVYNPSESGDVS 193


>ref|XP_002303062.1| predicted protein [Populus trichocarpa]
          Length = 210

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/44 (65%), Positives = 31/44 (70%)
 Frame = +1

Query: 40  EAPVNPGQDLPSVQENHISEQPIALSEEANGEEVYDPSENGDGS 171
           EAPV P QD P  QE HISE   ALSEE  G EVY+PSE+GD S
Sbjct: 150 EAPVAPDQDTPHTQETHISEPTAALSEEVIGGEVYNPSESGDVS 193


>gb|EOX93849.1| Nuclear transport factor 2 family protein with RNA binding domain,
           putative isoform 1 [Theobroma cacao]
          Length = 476

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 28/44 (63%), Positives = 30/44 (68%)
 Frame = +1

Query: 40  EAPVNPGQDLPSVQENHISEQPIALSEEANGEEVYDPSENGDGS 171
           +A   P QD   V ENHI  QP A  EEANG EVY+PSENGDGS
Sbjct: 154 KASFTPEQDPSPVPENHIVLQPAASPEEANGPEVYNPSENGDGS 197


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