BLASTX nr result

ID: Jatropha_contig00008930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00008930
         (541 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510843.1| two-component system sensor histidine kinase...    97   2e-18
ref|XP_002322438.1| type-b response regulator [Populus trichocar...    76   5e-12
gb|EOY23087.1| Two-component system sensor histidine kinase/resp...    62   6e-08
gb|EEE96475.2| two-component response regulator ARR13 family pro...    60   3e-07
ref|XP_002318255.1| predicted protein [Populus trichocarpa]            60   3e-07
ref|XP_002318254.1| type-b response regulator [Populus trichocarpa]    60   3e-07

>ref|XP_002510843.1| two-component system sensor histidine kinase/response regulator,
           putative [Ricinus communis] gi|223549958|gb|EEF51445.1|
           two-component system sensor histidine kinase/response
           regulator, putative [Ricinus communis]
          Length = 754

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 70/179 (39%), Positives = 99/179 (55%), Gaps = 25/179 (13%)
 Frame = +2

Query: 2   SLFGNNFTNFQRXXXXXXXXXXXXQPNR------SNNAGTTLSFDRASTYGLTSNATNGL 163
           SLFG+N ++FQ+              +       +N AG  +S + A+T+GL ++A NGL
Sbjct: 355 SLFGSNLSSFQQRSMFGNTSPLYSSNDTRPGLSTTNTAGLNMSPNGATTFGLMNDAANGL 414

Query: 164 ISGPQHNQAIRRSNPFNSDNP--FKFGS----SNHAS---GSGTVNNSY-PFLNPNSNYA 313
            +     Q  ++ N   S     F+FGS    SN+AS   G+GT +NSY   LNPN NYA
Sbjct: 415 SNCTSPKQMHQQQNQSRSTPLPFFQFGSGLSSSNYASSIGGTGTSSNSYLSSLNPNGNYA 474

Query: 314 GIRLTSDGELIGSGPIGFSGKNLSS-------GSSLMNW--TRNNNASSTDTLNGLFGY 463
           GIRLT++GELIGSG + F+G  L+S        SSL+NW  + +N  S+  T   +FGY
Sbjct: 475 GIRLTNEGELIGSGQVRFNGNELTSTGFNGGYDSSLLNWNISNDNLNSNAQTGGDIFGY 533


>ref|XP_002322438.1| type-b response regulator [Populus trichocarpa]
           gi|222869434|gb|EEF06565.1| two-component response
           regulator ARR13 family protein [Populus trichocarpa]
          Length = 716

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 51/125 (40%), Positives = 65/125 (52%), Gaps = 12/125 (9%)
 Frame = +2

Query: 86  SNNAGTTLSFDRAST-YGLTSNATNGLISGPQHNQAIRRSNPFNSDNPFKFGS-----SN 247
           +NN GT     R S   GLT   +   I  PQ NQ       F+S    KFGS     +N
Sbjct: 395 NNNTGTNPPASRESVPNGLTHGKSPMQIYQPQ-NQGRSNLQSFDSSEHNKFGSIGVQATN 453

Query: 248 HASGSGTVNNSYPFLNPNSNYAGIRLTSDGELIGSGPIGFSGKNLSSG------SSLMNW 409
           + SG G + N+   LN N+NYAGIR+ +DG+LIG+G +  S   LS+G        LMNW
Sbjct: 454 YRSGVGNIGNNNNSLNTNNNYAGIRVNTDGQLIGAGQLQVSKNKLSNGFGNGGNCGLMNW 513

Query: 410 TRNNN 424
           T N N
Sbjct: 514 THNGN 518


>gb|EOY23087.1| Two-component system sensor histidine kinase/response regulator,
           putative [Theobroma cacao]
          Length = 680

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 52/146 (35%), Positives = 74/146 (50%), Gaps = 22/146 (15%)
 Frame = +2

Query: 98  GTTLSFDRASTYGLT---SNATNGLISGPQ----HNQAIRRSNPFNS---DNPFKFGSSN 247
           G  L F   S + L    +NATNGL++G      + Q I+    F+S    + F+FGSS+
Sbjct: 405 GNRLGFANGSNFSLNGSLTNATNGLMNGANSRHTYQQQIQARQNFHSAGFPSQFRFGSSS 464

Query: 248 -HASGS-------GTVNNSYPFLNP----NSNYAGIRLTSDGELIGSGPIGFSGKNLSSG 391
            H+S S       G+++ SYP LN     N++YAG+RLT+ G+LI  G    +G     G
Sbjct: 465 LHSSNSTLGTGNIGSISTSYPTLNSSCSNNNSYAGVRLTTGGQLIEMGQTRLNG---CYG 521

Query: 392 SSLMNWTRNNNASSTDTLNGLFGYQG 469
           S  M+ T N   +     N  FGY G
Sbjct: 522 S--MDGTYNEEMNVAAMGNQTFGYMG 545


>gb|EEE96475.2| two-component response regulator ARR13 family protein [Populus
           trichocarpa] gi|550327080|gb|EEE96474.2| hypothetical
           protein POPTR_0012s13900g [Populus trichocarpa]
          Length = 587

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 43/109 (39%), Positives = 56/109 (51%), Gaps = 19/109 (17%)
 Frame = +2

Query: 155 NGLISGPQ-----HNQAIRRSNPFNSDNP---FKFGS-----SNHASGSGTVNNSYPFLN 295
           NGL  G +     H Q   RS   N  +P    +FG+     +N+ SG G +      LN
Sbjct: 325 NGLTHGTRPMQMYHPQNQARSYLQNFGSPPLINRFGAVGIQATNYGSGVGDIGIINNSLN 384

Query: 296 PNSNYAGIRLTSDGELIGSGPIGFSGKNLSSGSS------LMNWTRNNN 424
            N+NY GIR+T+DG LIGSG +  +   LS+G S      LMNW RN N
Sbjct: 385 TNNNYVGIRVTTDGRLIGSGQMQLNTNELSNGFSDGGHPCLMNWARNGN 433


>ref|XP_002318255.1| predicted protein [Populus trichocarpa]
          Length = 623

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 43/109 (39%), Positives = 56/109 (51%), Gaps = 19/109 (17%)
 Frame = +2

Query: 155 NGLISGPQ-----HNQAIRRSNPFNSDNP---FKFGS-----SNHASGSGTVNNSYPFLN 295
           NGL  G +     H Q   RS   N  +P    +FG+     +N+ SG G +      LN
Sbjct: 361 NGLTHGTRPMQMYHPQNQARSYLQNFGSPPLINRFGAVGIQATNYGSGVGDIGIINNSLN 420

Query: 296 PNSNYAGIRLTSDGELIGSGPIGFSGKNLSSGSS------LMNWTRNNN 424
            N+NY GIR+T+DG LIGSG +  +   LS+G S      LMNW RN N
Sbjct: 421 TNNNYVGIRVTTDGRLIGSGQMQLNTNELSNGFSDGGHPCLMNWARNGN 469


>ref|XP_002318254.1| type-b response regulator [Populus trichocarpa]
          Length = 658

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 43/109 (39%), Positives = 56/109 (51%), Gaps = 19/109 (17%)
 Frame = +2

Query: 155 NGLISGPQ-----HNQAIRRSNPFNSDNP---FKFGS-----SNHASGSGTVNNSYPFLN 295
           NGL  G +     H Q   RS   N  +P    +FG+     +N+ SG G +      LN
Sbjct: 396 NGLTHGTRPMQMYHPQNQARSYLQNFGSPPLINRFGAVGIQATNYGSGVGDIGIINNSLN 455

Query: 296 PNSNYAGIRLTSDGELIGSGPIGFSGKNLSSGSS------LMNWTRNNN 424
            N+NY GIR+T+DG LIGSG +  +   LS+G S      LMNW RN N
Sbjct: 456 TNNNYVGIRVTTDGRLIGSGQMQLNTNELSNGFSDGGHPCLMNWARNGN 504


Top