BLASTX nr result

ID: Jatropha_contig00008890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00008890
         (600 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC78944.1| hypothetical protein (mitochondrion) [Vicia faba]      124   1e-26
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...   110   3e-22
ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat...   107   3e-21
gb|EPS74490.1| hypothetical protein M569_00256 [Genlisea aurea]        59   1e-06
ref|WP_004596298.1| hypothetical protein [Rickettsia prowazekii]...    49   4e-06

>gb|AGC78944.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 134

 Score =  124 bits (312), Expect = 1e-26
 Identities = 72/121 (59%), Positives = 74/121 (61%), Gaps = 16/121 (13%)
 Frame = +1

Query: 118 HLQDKAKNWTLLNKREK--------------PXXXXXXXXXXXXXIFLKRTLESAS--KG 249
           HLQ+KAKNWTLLNKRE                             I  +RTLESAS  KG
Sbjct: 14  HLQEKAKNWTLLNKRENFLFSKATSKGLSCAKAAFAHPFSCSLAAIKKQRTLESASNSKG 73

Query: 250 AGSPLTDSTATCWHXXXXXXXXXXXXXHFGCKDFLLRRMSQQHKTRVSLVIGLDQTSHDT 429
           AGS LTDSTATCWH             HFGCKDFLLRRMSQQHKTRVSLVIGLDQTSHDT
Sbjct: 74  AGSLLTDSTATCWHSISSAGASLGSSAHFGCKDFLLRRMSQQHKTRVSLVIGLDQTSHDT 133

Query: 430 S 432
           S
Sbjct: 134 S 134


>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score =  110 bits (275), Expect = 3e-22
 Identities = 61/88 (69%), Positives = 62/88 (70%)
 Frame = -1

Query: 585 KGMTGACTIVGACVLIRYYAHNLTSP*HMNNKTCP*RDGTDFHTGAAWLSSARVVRCLVK 406
           K +TGACT  GAC LIRY A NLTS                    AAWLSSARVVRCLVK
Sbjct: 292 KELTGACTSGGACGLIRYNAQNLTS--------------------AAWLSSARVVRCLVK 331

Query: 405 SYNERNPRFVLLRHAPKEKVFATEVSRG 322
           SYNERNPRFVLLRHAPKEKVFATEVSRG
Sbjct: 332 SYNERNPRFVLLRHAPKEKVFATEVSRG 359


>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
            gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
            [Medicago truncatula]
          Length = 1116

 Score =  107 bits (266), Expect = 3e-21
 Identities = 86/200 (43%), Positives = 98/200 (49%), Gaps = 4/200 (2%)
 Frame = +2

Query: 5    LFVSEPFWRGVLNPLRTTPPGGSPECRVFLRRQLDVVVTCKIRPKT--GLY*TSEKSPFL 178
            LF S  FWRGVLNPLRTTPPGGSPECRVFLRRQLDVV+TCK    T  GL   +   PF 
Sbjct: 705  LFRSRLFWRGVLNPLRTTPPGGSPECRVFLRRQLDVVLTCKRSKATSKGLS-CAFAHPFS 763

Query: 179  CY**S--KAR*LQSF*SAH*KVLRKAPAPLLLTAQLRAGTQLVALARHSAPRLTSVAKTF 352
            C   +  K R L+S             A  LLT         ++ A  S   L S A   
Sbjct: 764  CSLAAIKKQRTLES-------ASNSKGAGSLLTDSTATCWHSISSAGAS---LGSSAHFG 813

Query: 353  SLGACLSNTKRGFRSL*DLTKHLTTRADDSHAAPV*KSVPSR*GQVLLFICQGLVRLCA* 532
                 L    +  ++   L   L   + D+              QV LFICQGLVR CA 
Sbjct: 814  CKDFLLRRMSQQHKTRVSLVIGLDQTSHDTR-------------QVFLFICQGLVRFCAL 860

Query: 533  YRIKTHAPTIVQAPVIPLSF 592
            YRIK HAP +VQAPV    F
Sbjct: 861  YRIKPHAPPLVQAPVNSFEF 880


>gb|EPS74490.1| hypothetical protein M569_00256 [Genlisea aurea]
          Length = 184

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 35/58 (60%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
 Frame = -2

Query: 365 MRLRRKSLQPK*AEEPSDVPALLIECQHVAVLSVRGEP---APFEALSSVRFRKIAAS 201
           MRLRRKS QPK AEEPSDVPALLIECQH AV +    P   AP E    V   +  AS
Sbjct: 1   MRLRRKSFQPKRAEEPSDVPALLIECQHYAVSNKYAPPKLRAPEERKRRVPHSRRTAS 58


>ref|WP_004596298.1| hypothetical protein [Rickettsia prowazekii]
           gi|484357976|gb|EOB10663.1| hypothetical protein
           H376_1900 [Rickettsia prowazekii str. GvF12]
          Length = 162

 Score = 48.9 bits (115), Expect(2) = 4e-06
 Identities = 22/25 (88%), Positives = 22/25 (88%)
 Frame = -1

Query: 459 HTGAAWLSSARVVRCLVKSYNERNP 385
           HTG AWLSSARVVRC VKS NERNP
Sbjct: 33  HTGVAWLSSARVVRCWVKSRNERNP 57



 Score = 27.7 bits (60), Expect(2) = 4e-06
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 550 MCFNSILRA*PYQPLTY 500
           M FNS+LR  PYQPLT+
Sbjct: 1   MRFNSMLREKPYQPLTW 17


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