BLASTX nr result

ID: Jatropha_contig00008501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00008501
         (298 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512874.1| transcription factor, putative [Ricinus comm...    84   2e-14
ref|XP_002300138.1| predicted protein [Populus trichocarpa]            79   8e-13
gb|EOY02900.1| B-box type zinc finger protein with CCT domain, p...    69   5e-10
gb|EEE84943.2| hypothetical protein POPTR_0001s33080g [Populus t...    47   9e-07

>ref|XP_002512874.1| transcription factor, putative [Ricinus communis]
           gi|223547885|gb|EEF49377.1| transcription factor,
           putative [Ricinus communis]
          Length = 426

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/79 (55%), Positives = 53/79 (67%)
 Frame = -2

Query: 237 CCSQQLSRHTARTEESKKTSLMELSSQSKLVKAKTCSSPIHFQVVEKPHPAWIGTLDEVR 58
           C  QQ+ + T  T   K T L+E SS S L +AK+ +SP H +VVEK H AW+GT D   
Sbjct: 309 CSKQQVLQSTMETGGGKDTLLVEQSSDSLLAEAKSNNSPRHVEVVEKSHLAWVGTDDMET 368

Query: 57  SDYDMELFAQNRGNAMLRY 1
           S  D+ELFAQNRGNAMLRY
Sbjct: 369 SKADVELFAQNRGNAMLRY 387


>ref|XP_002300138.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 45/92 (48%), Positives = 54/92 (58%)
 Frame = -2

Query: 276 CLTPFEDVLSKNTCCSQQLSRHTARTEESKKTSLMELSSQSKLVKAKTCSSPIHFQVVEK 97
           C +  ED LSKN+C +QQLSR+   TE    T L+ LS  S   +        H QV+E+
Sbjct: 319 CSSTCEDNLSKNSCSNQQLSRYKPPTENCNNTPLLGLSPGSMPGEPNA-----HIQVMEQ 373

Query: 96  PHPAWIGTLDEVRSDYDMELFAQNRGNAMLRY 1
           P   W  TL+EVR   D  LFAQNRGNAMLRY
Sbjct: 374 PSLTWFETLNEVRQKGDAGLFAQNRGNAMLRY 405


>gb|EOY02900.1| B-box type zinc finger protein with CCT domain, putative [Theobroma
           cacao]
          Length = 457

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 38/87 (43%), Positives = 55/87 (63%)
 Frame = -2

Query: 261 EDVLSKNTCCSQQLSRHTARTEESKKTSLMELSSQSKLVKAKTCSSPIHFQVVEKPHPAW 82
           ED LS+++ C+Q  S +TA TE S    ++  SS SK+V+   C S  + QV+E    A 
Sbjct: 328 EDTLSRSSRCNQPFSSYTATTEASNHVPVVGSSSDSKVVEPLKCDSTRYVQVMEHLVLAG 387

Query: 81  IGTLDEVRSDYDMELFAQNRGNAMLRY 1
             +++E ++  DMEL AQ+RGNAMLRY
Sbjct: 388 GESMNEAKAKIDMELLAQSRGNAMLRY 414


>gb|EEE84943.2| hypothetical protein POPTR_0001s33080g [Populus trichocarpa]
          Length = 411

 Score = 47.4 bits (111), Expect(2) = 9e-07
 Identities = 28/69 (40%), Positives = 36/69 (52%)
 Frame = -2

Query: 276 CLTPFEDVLSKNTCCSQQLSRHTARTEESKKTSLMELSSQSKLVKAKTCSSPIHFQVVEK 97
           C +  ED LSKN+C +QQLSR+   TE    T L+ LS  S   +        H QV+E+
Sbjct: 319 CSSTCEDNLSKNSCSNQQLSRYKPPTENCNNTPLLGLSPGSMPGEPNA-----HIQVMEQ 373

Query: 96  PHPAWIGTL 70
           P   W  TL
Sbjct: 374 PSLTWFETL 382



 Score = 30.8 bits (68), Expect(2) = 9e-07
 Identities = 13/19 (68%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = -3

Query: 56  PTMTW-NFLHRTEATPCYD 3
           P++TW   LHRTEATPC D
Sbjct: 374 PSLTWFETLHRTEATPCCD 392


Top