BLASTX nr result

ID: Jatropha_contig00008372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00008372
         (549 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525972.1| nucleic acid binding protein, putative [Rici...    55   2e-07

>ref|XP_002525972.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223534704|gb|EEF36396.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 693

 Score = 55.5 bits (132), Expect(2) = 2e-07
 Identities = 32/77 (41%), Positives = 43/77 (55%)
 Frame = +2

Query: 122 KKIPSLGMETEDMIGLPAXXXXXXXXXXGEIHKSGFGSGEADSQPRNFEAEEDVGDGDSL 301
           +K+  L METEDMI LP            E+ +   G GEA+SQP N+EAEE + DG ++
Sbjct: 32  EKVLILSMETEDMISLPDSTNSGDGIENNELDQPESGPGEAESQPSNYEAEEGMIDGHNM 91

Query: 302 RLNNDVDIDTEKGIRGP 352
            L N+VDI  +     P
Sbjct: 92  GL-NEVDIGNKTETSDP 107



 Score = 25.0 bits (53), Expect(2) = 2e-07
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 360 LALVEDDTGAEKILGDSEVLDSNEDDIGTEEHVTRLEN 473
           L L ++D GAE+    S+  + NE+++ TEE     EN
Sbjct: 110 LELNQNDFGAEECTKGSKDSELNEENVKTEECSAVQEN 147


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