BLASTX nr result

ID: Jatropha_contig00008078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00008078
         (428 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat...   104   1e-38
gb|AGC78944.1| hypothetical protein (mitochondrion) [Vicia faba]      121   1e-25
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...    74   2e-11
gb|EPS74490.1| hypothetical protein M569_00256 [Genlisea aurea]        59   8e-07

>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
           gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
           [Medicago truncatula]
          Length = 1116

 Score =  104 bits (259), Expect(2) = 1e-38
 Identities = 54/71 (76%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
 Frame = +1

Query: 220 KRTLESAS--KGAGSPLTDSTATCWHXXXXXXXXXXXXXHFGCKDFLLRRMSQQHKTRVS 393
           +RTLESAS  KGAGS LTDSTATCWH             HFGCKDFLLRRMSQQHKTRVS
Sbjct: 772 QRTLESASNSKGAGSLLTDSTATCWHSISSAGASLGSSAHFGCKDFLLRRMSQQHKTRVS 831

Query: 394 LVIGLDQTSHD 426
           LVIGLDQTSHD
Sbjct: 832 LVIGLDQTSHD 842



 Score = 81.3 bits (199), Expect(2) = 1e-38
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = +2

Query: 5   LFVSEPFWRGVLNPLRTTPPGGSPECRVFLRRQLDVVVTCK 127
           LF S  FWRGVLNPLRTTPPGGSPECRVFLRRQLDVV+TCK
Sbjct: 705 LFRSRLFWRGVLNPLRTTPPGGSPECRVFLRRQLDVVLTCK 745


>gb|AGC78944.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 134

 Score =  121 bits (303), Expect = 1e-25
 Identities = 70/119 (58%), Positives = 72/119 (60%), Gaps = 16/119 (13%)
 Frame = +1

Query: 118 HLQDKAKNWTLLNKREK--------------PXXXXXXXXXXXXXIFLKRTLESAS--KG 249
           HLQ+KAKNWTLLNKRE                             I  +RTLESAS  KG
Sbjct: 14  HLQEKAKNWTLLNKRENFLFSKATSKGLSCAKAAFAHPFSCSLAAIKKQRTLESASNSKG 73

Query: 250 AGSPLTDSTATCWHXXXXXXXXXXXXXHFGCKDFLLRRMSQQHKTRVSLVIGLDQTSHD 426
           AGS LTDSTATCWH             HFGCKDFLLRRMSQQHKTRVSLVIGLDQTSHD
Sbjct: 74  AGSLLTDSTATCWHSISSAGASLGSSAHFGCKDFLLRRMSQQHKTRVSLVIGLDQTSHD 132


>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = -3

Query: 426 VVRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG 322
           VVRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG
Sbjct: 325 VVRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG 359


>gb|EPS74490.1| hypothetical protein M569_00256 [Genlisea aurea]
          Length = 184

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 35/58 (60%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
 Frame = -1

Query: 365 MRLRRKSLQPK*AEEPSDVPALLIECQHVAVLSVRGEP---APFEALSSVRFRKIAAS 201
           MRLRRKS QPK AEEPSDVPALLIECQH AV +    P   AP E    V   +  AS
Sbjct: 1   MRLRRKSFQPKRAEEPSDVPALLIECQHYAVSNKYAPPKLRAPEERKRRVPHSRRTAS 58


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