BLASTX nr result
ID: Jatropha_contig00006851
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Jatropha_contig00006851 (558 letters) Database: NCBI-nr (updated 2014/02/11) 35,149,712 sequences; 12,374,887,350 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinu... 132 7e-29 >ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis] gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1, putative [Ricinus communis] Length = 544 Score = 132 bits (331), Expect = 7e-29 Identities = 87/213 (40%), Positives = 98/213 (46%), Gaps = 29/213 (13%) Frame = +1 Query: 7 WDQSNPSTVSXXXXXXXXXXXXXXXXXXXSAPSYNYNQKTHVTSNTYDHSYSQQAPSYG- 183 WDQSNP+T+S + + +YNQ V S+ Y +SYSQQ +YG Sbjct: 313 WDQSNPTTMSQTQQMAGYGYYGQQPQMGSAPLNSSYNQTPPVASSGYGNSYSQQTSNYGQ 372 Query: 184 ---------------------SAAVSSQPDGAIXXXXXXXXXXXXXXXXXX-------VX 279 SAAVSSQ DGAI Sbjct: 373 NISSQTPTLEQQRPYATSNYGSAAVSSQSDGAISSQSTQAAPAYPPPAYNQQVADPQTYW 432 Query: 280 XXXXXXXXXXXXXGYDQTGYSQIAYGGLQPVQFMPSSTQPVYGPGGYPLEPSPATANSVQ 459 GYDQTGYSQ YG SS QPVYG GGYPL+PSPA AN Q Sbjct: 433 TAAGYAGQPPPQTGYDQTGYSQAGYG------VSLSSNQPVYGQGGYPLQPSPAAANYAQ 486 Query: 460 ETHPLTYGQAQVETQPQSQQPNNGHSQSLAYGA 558 T+PL YGQ Q+E QPQSQ NNGHSQSLAYGA Sbjct: 487 GTNPLGYGQPQLEAQPQSQPSNNGHSQSLAYGA 519