BLASTX nr result

ID: Jatropha_contig00006784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00006784
         (391 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|1PSY|A Chain A, Structure Of Ricc3, Nmr, 20 Structures             57   3e-06
ref|XP_002522854.1| sweet protein mabinlin-1 chain A [Ricinus co...    57   3e-06
prf||1707274A 2S albumin                                               57   3e-06

>pdb|1PSY|A Chain A, Structure Of Ricc3, Nmr, 20 Structures
          Length = 125

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
 Frame = -3

Query: 380 EDMLARPGIENPRQ--QVPRQCCNQAKELSAICRCESIHYLLEKQLEEGEVGSEDEAR-- 213
           E++L  PG EN +Q  Q  +QCCNQ K++   C+CE+I Y+ E Q+++G++  E+  R  
Sbjct: 45  EEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVA 104

Query: 212 RRTKNIIDVCFGSICPR 162
           +R   I+  C G  C R
Sbjct: 105 QRAGEIVSSC-GVRCMR 120


>ref|XP_002522854.1| sweet protein mabinlin-1 chain A [Ricinus communis]
           gi|255563707|ref|XP_002522855.1| sweet protein
           mabinlin-1, chain B [Ricinus communis]
           gi|112762|sp|P01089.2|2SS_RICCO RecName: Full=2S
           albumin; AltName: Allergen=Ric c 1/3; Contains: RecName:
           Full=Allergen Ric c 3 small chain; AltName: Full=4.7 kDa
           napin-like protein small chain; AltName: Full=CB-1A
           small chain; AltName: Full=RS1A; Contains: RecName:
           Full=Allergen Ric c 3 large chain; AltName: Full=CB-1A
           large chain; AltName: Full=RL1; Contains: RecName:
           Full=Allergen Ric c 1 small chain; AltName: Full=2S
           albumin small chain; AltName: Full=4 kDa napin-like
           protein small chain; AltName: Full=RS2B; Contains:
           RecName: Full=Allergen Ric c 1 large chain; AltName:
           Full=2S albumin large chain; AltName: Full=7.3 kDa
           napin-like protein large chain; AltName: Full=RL2;
           Flags: Precursor gi|21068|emb|CAA38097.1| 2S albumin
           precursor [Ricinus communis] gi|223537938|gb|EEF39552.1|
           sweet protein mabinlin-1 chain A [Ricinus communis]
           gi|223537939|gb|EEF39553.1| sweet protein mabinlin-1,
           chain B [Ricinus communis]
          Length = 258

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
 Frame = -3

Query: 380 EDMLARPGIENPRQ--QVPRQCCNQAKELSAICRCESIHYLLEKQLEEGEVGSEDEAR-- 213
           E++L  PG EN +Q  Q  +QCCNQ K++   C+CE+I Y+ E Q+++G++  E+  R  
Sbjct: 76  EEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVA 135

Query: 212 RRTKNIIDVCFGSICPR 162
           +R   I+  C G  C R
Sbjct: 136 QRAGEIVSSC-GVRCMR 151


>prf||1707274A 2S albumin
          Length = 258

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
 Frame = -3

Query: 380 EDMLARPGIENPRQ--QVPRQCCNQAKELSAICRCESIHYLLEKQLEEGEVGSEDEAR-- 213
           E++L  PG EN +Q  Q  +QCCNQ K++   C+CE+I Y+ E Q+++G++  E+  R  
Sbjct: 76  EEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVA 135

Query: 212 RRTKNIIDVCFGSICPR 162
           +R   I+  C G  C R
Sbjct: 136 QRAGEIVSSC-GVRCMR 151


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