BLASTX nr result

ID: Jatropha_contig00006508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00006508
         (438 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein ...    57   2e-06
gb|ERP47038.1| hypothetical protein POPTR_0323s00210g [Populus t...    56   4e-06
ref|XP_002336806.1| predicted protein [Populus trichocarpa] gi|5...    56   4e-06
gb|EMJ28760.1| hypothetical protein PRUPE_ppa013208mg [Prunus pe...    56   5e-06
gb|EOY05157.1| Glycine-rich RNA-binding protein 4 isoform 2 [The...    55   7e-06
gb|EOY05156.1| Glycine-rich RNA-binding protein 4 isoform 1 [The...    55   7e-06
ref|XP_004297041.1| PREDICTED: glycine-rich RNA-binding protein ...    55   7e-06
gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamari...    55   9e-06

>ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|147833478|emb|CAN75185.1| hypothetical
           protein VITISV_001912 [Vitis vinifera]
           gi|298205231|emb|CBI17290.3| unnamed protein product
           [Vitis vinifera]
          Length = 152

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/47 (59%), Positives = 31/47 (65%)
 Frame = +3

Query: 63  GRSRGFGFVDFXXXXXXXXXXXXMDGQELQGRSVRVSYAQERTGPPR 203
           GRSRGFGFV+F            MDGQEL GR++RVSYA ERT  PR
Sbjct: 78  GRSRGFGFVNFTSDDSASSALSAMDGQELNGRNIRVSYANERTPGPR 124


>gb|ERP47038.1| hypothetical protein POPTR_0323s00210g [Populus trichocarpa]
          Length = 134

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/47 (57%), Positives = 32/47 (68%)
 Frame = +3

Query: 63  GRSRGFGFVDFXXXXXXXXXXXXMDGQELQGRSVRVSYAQERTGPPR 203
           GRSRGFGFV +            MDGQEL GR+VRVS+A+ER+ PPR
Sbjct: 74  GRSRGFGFVSYDSSESASEAQSAMDGQELGGRNVRVSFAEERSRPPR 120


>ref|XP_002336806.1| predicted protein [Populus trichocarpa] gi|550309537|gb|ERP47037.1|
           glycine-rich RNA-binding family protein [Populus
           trichocarpa]
          Length = 112

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/47 (57%), Positives = 32/47 (68%)
 Frame = +3

Query: 63  GRSRGFGFVDFXXXXXXXXXXXXMDGQELQGRSVRVSYAQERTGPPR 203
           GRSRGFGFV +            MDGQEL GR+VRVS+A+ER+ PPR
Sbjct: 52  GRSRGFGFVSYDSSESASEAQSAMDGQELGGRNVRVSFAEERSRPPR 98


>gb|EMJ28760.1| hypothetical protein PRUPE_ppa013208mg [Prunus persica]
          Length = 135

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 27/45 (60%), Positives = 30/45 (66%)
 Frame = +3

Query: 63  GRSRGFGFVDFXXXXXXXXXXXXMDGQELQGRSVRVSYAQERTGP 197
           G+SRGFGFVDF            MDGQEL GR++RVS A ERTGP
Sbjct: 73  GKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATERTGP 117


>gb|EOY05157.1| Glycine-rich RNA-binding protein 4 isoform 2 [Theobroma cacao]
          Length = 156

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/47 (57%), Positives = 30/47 (63%)
 Frame = +3

Query: 63  GRSRGFGFVDFXXXXXXXXXXXXMDGQELQGRSVRVSYAQERTGPPR 203
           GRSRGFGFV+F            MDGQEL GR++RVSYA ER   PR
Sbjct: 89  GRSRGFGFVNFADDQSASNALSAMDGQELNGRNIRVSYANERPSGPR 135


>gb|EOY05156.1| Glycine-rich RNA-binding protein 4 isoform 1 [Theobroma cacao]
          Length = 139

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/47 (57%), Positives = 30/47 (63%)
 Frame = +3

Query: 63  GRSRGFGFVDFXXXXXXXXXXXXMDGQELQGRSVRVSYAQERTGPPR 203
           GRSRGFGFV+F            MDGQEL GR++RVSYA ER   PR
Sbjct: 72  GRSRGFGFVNFADDQSASNALSAMDGQELNGRNIRVSYANERPSGPR 118


>ref|XP_004297041.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Fragaria vesca subsp. vesca]
          Length = 143

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/45 (60%), Positives = 30/45 (66%)
 Frame = +3

Query: 63  GRSRGFGFVDFXXXXXXXXXXXXMDGQELQGRSVRVSYAQERTGP 197
           GRSRGFGFV+F            MDGQ+L GRS+RVS A ERTGP
Sbjct: 73  GRSRGFGFVNFVDEEAANSALTAMDGQDLNGRSIRVSVATERTGP 117


>gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
          Length = 143

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 27/47 (57%), Positives = 31/47 (65%)
 Frame = +3

Query: 63  GRSRGFGFVDFXXXXXXXXXXXXMDGQELQGRSVRVSYAQERTGPPR 203
           GRSRGFGFV+F            MDG EL GRS+RVS+AQER+  PR
Sbjct: 73  GRSRGFGFVNFVDNEAAGSALSSMDGVELNGRSIRVSFAQERSSGPR 119


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